Files
model_garden/.cloud-build/ExecuteChangedNotebooks.py
T
Morgan DuandGitHub 64a778c5e7 Copy Cloudbuild and GithubActions setup from ai-platform-samples for notebook testing (#1)
* copy github actions

* copy Cloud Build

* add Dockerfile for cloud build

* add notebook test_folders.txt to .cloud-build and update the file path
2021-07-20 10:37:18 -07:00

163 lines
5.7 KiB
Python
Executable File

#!/bin/bash
# Copyright 2019 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
import pathlib
import subprocess
from pathlib import Path
from typing import Dict, List, Optional
import ExecuteNotebook
def run_changed_notebooks(
test_paths_file: str,
output_folder: str,
variable_project_id: str,
variable_region: str,
base_branch: Optional[str],
):
"""
Run the notebooks that exist under the folders defined in the test_paths_file.
It only runs notebooks that have differences from the Git base_branch.
The executed notebooks are saved in the output_folder.
Variables are also injected into the notebooks such as the variable_project_id and variable_region.
Args:
test_paths_file (str):
Required. The new-line delimited file to folders and files that need checking.
Folders are checked recursively.
base_branch (str):
Optional. If provided, only the files that have changed from the base_branch will be checked.
If not provided, all files will be checked.
output_folder (str):
Required. The folder to write executed notebooks to.
variable_project_id (str):
Required. The value for PROJECT_ID to inject into notebooks.
variable_region (str):
Required. The value for REGION to inject into notebooks.
"""
test_paths = []
with open(test_paths_file) as file:
lines = [line.strip() for line in file.readlines()]
lines = [line for line in lines if len(line) > 0]
test_paths = [line for line in lines]
if len(test_paths) == 0:
raise RuntimeError("No test folders found.")
print(f"Checking folders: {test_paths}")
# Find notebooks
notebooks = []
if base_branch:
print(f"Looking for notebooks that changed from branch: {base_branch}")
notebooks = subprocess.check_output(
["git", "diff", "--name-only", f"origin/{base_branch}..."] + test_paths
)
else:
print(f"Looking for all notebooks.")
notebooks = subprocess.check_output(["git", "ls-files"] + test_paths)
notebooks = notebooks.decode("utf-8").split("\n")
notebooks = [notebook for notebook in notebooks if notebook.endswith(".ipynb")]
notebooks = [notebook for notebook in notebooks if len(notebook) > 0]
notebooks = [notebook for notebook in notebooks if Path(notebook).exists()]
# Create paths
artifacts_path = Path(output_folder)
artifacts_path.mkdir(parents=True, exist_ok=True)
artifacts_path.joinpath("success").mkdir(parents=True, exist_ok=True)
artifacts_path.joinpath("failure").mkdir(parents=True, exist_ok=True)
passed_notebooks: List[str] = []
failed_notebooks: List[str] = []
if len(notebooks) > 0:
print(f"Found {len(notebooks)} modified notebooks: {notebooks}")
for notebook in notebooks:
print(f"Running notebook: {notebook}")
# TODO: Handle cases where multiple notebooks have the same name
try:
ExecuteNotebook.execute_notebook(
notebook_file_path=notebook,
output_file_folder=artifacts_path,
replacement_map={
"PROJECT_ID": variable_project_id,
"REGION": variable_region,
},
)
print(f"Notebook finished successfully.")
passed_notebooks.append(notebook)
except Exception as error:
print(f"Notebook finished with failure: {error}")
failed_notebooks.append(notebook)
else:
print("No notebooks modified in this pull request.")
if len(failed_notebooks) > 0:
print(f"{len(failed_notebooks)} notebooks failed:")
print(failed_notebooks)
print(f"{len(passed_notebooks)} notebooks passed:")
print(passed_notebooks)
elif len(passed_notebooks) > 0:
print("All notebooks executed successfully:")
print(passed_notebooks)
parser = argparse.ArgumentParser(description="Run changed notebooks.")
parser.add_argument(
"--test_paths_file",
type=pathlib.Path,
help="The path to the file that has newline-limited folders of notebooks that should be tested.",
required=True,
)
parser.add_argument(
"--base_branch",
help="The base git branch to diff against to find changed files.",
required=False,
)
parser.add_argument(
"--output_folder",
type=pathlib.Path,
help="The path to the folder to store executed notebooks.",
required=True,
)
parser.add_argument(
"--variable_project_id",
type=str,
help="The GCP project id. This is used to inject a variable value into the notebook before running.",
required=True,
)
parser.add_argument(
"--variable_region",
type=str,
help="The GCP region. This is used to inject a variable value into the notebook before running.",
required=True,
)
args = parser.parse_args()
run_changed_notebooks(
test_paths_file=args.test_paths_file,
base_branch=args.base_branch,
output_folder=args.output_folder,
variable_project_id=args.variable_project_id,
variable_region=args.variable_region,
)