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Author SHA1 Message Date
ivanmkc 0968fb77db Improve download instructions 2022-07-21 19:33:17 -04:00
ivanmkc 471c57132a Fixed issue with numbers in replacement content 2022-07-21 19:29:13 -04:00
ivanmkc 72bad1f6ee Removed replacement of variable comparisons 2022-07-21 15:56:27 -04:00
373 changed files with 28485 additions and 134465 deletions
@@ -1,2 +1 @@
ratemate
google-cloud-aiplatform
+1 -5
View File
@@ -5,8 +5,6 @@ from resource_cleanup_manager import (
ModelResourceCleanupManager,
EndpointResourceCleanupManager,
ResourceCleanupManager,
MatchingEngineIndexEndpointResourceCleanupManager,
MatchingEngineIndexResourceCleanupManager,
)
rate_limit = RateLimit(max_count=25, per=60, greedy=False)
@@ -42,12 +40,10 @@ if is_dry_run:
print("Starting cleanup in dry run mode...")
# List of all cleanup managers
managers: List[ResourceCleanupManager] = [
managers = [
DatasetResourceCleanupManager(),
EndpointResourceCleanupManager(),
ModelResourceCleanupManager(), # ModelResourceCleanupManager must follow EndpointResourceCleanupManager due to deployed models blocking model deletion.
MatchingEngineIndexEndpointResourceCleanupManager(),
MatchingEngineIndexResourceCleanupManager(),
]
run_cleanup_managers(managers=managers, is_dry_run=is_dry_run)
@@ -109,11 +109,3 @@ class EndpointResourceCleanupManager(VertexAIResourceCleanupManager):
class ModelResourceCleanupManager(VertexAIResourceCleanupManager):
vertex_ai_resource = aiplatform.Model
class MatchingEngineIndexResourceCleanupManager(VertexAIResourceCleanupManager):
vertex_ai_resource = aiplatform.MatchingEngineIndex
class MatchingEngineIndexEndpointResourceCleanupManager(VertexAIResourceCleanupManager):
vertex_ai_resource = aiplatform.MatchingEngineIndexEndpoint
@@ -68,12 +68,6 @@ parser.add_argument(
help="A service account. This is used to inject a variable value into the notebook before running. This is not the account that will run the notebook.",
required=True,
)
parser.add_argument(
"--variable_vpc_network",
type=str,
help="The full VPC network name. See https://cloud.google.com/compute/docs/networks-and-firewalls#networks. Format is projects/{project}/global/networks/{network}, where {project} is a project number, as in '12345', and {network} is network name. See <https://cloud.google.com/compute/docs/reference/rest/v1/networks/insert> for details. This is used to inject a variable value into the notebook before running.",
required=False,
)
parser.add_argument(
"--staging_bucket",
type=str,
@@ -120,11 +114,10 @@ execute_changed_notebooks_helper.process_and_execute_notebooks(
container_uri=args.container_uri,
staging_bucket=args.staging_bucket,
artifacts_bucket=args.artifacts_bucket,
should_parallelize=args.should_parallelize,
timeout=args.timeout,
variable_project_id=args.variable_project_id,
variable_region=args.variable_region,
variable_service_account=args.variable_service_account,
variable_vpc_network=args.variable_vpc_network,
private_pool_id=args.private_pool_id,
should_parallelize=args.should_parallelize,
timeout=args.timeout,
)
+27 -108
View File
@@ -17,16 +17,13 @@ import concurrent
import dataclasses
import datetime
import functools
import json
import git
import operator
import os
import pathlib
import re
import subprocess
import utils
from typing import List, Optional
from utils import util
import execute_notebook_helper
import execute_notebook_remote
@@ -38,7 +35,6 @@ from utils import NotebookProcessors, util
# A buffer so that workers finish before the orchestrating job
WORKER_TIMEOUT_BUFFER_IN_SECONDS: int = 60 * 60
PYTHON_VERSION = "3.9" # Set default python version
def format_timedelta(delta: datetime.timedelta) -> str:
@@ -70,23 +66,14 @@ class NotebookExecutionResult:
log_url: str
output_uri: str
build_id: str
logs_bucket: str
error_message: Optional[str]
@property
def output_uri_web(self) -> Optional[str]:
if self.output_uri.startswith("gs://"):
return f"https://storage.googleapis.com/{self.output_uri[5:]}"
else:
return None
def _process_notebook(
notebook_path: str,
variable_project_id: str,
variable_region: str,
variable_service_account: str,
variable_vpc_network: Optional[str],
):
# Read notebook
with open(notebook_path) as f:
@@ -99,10 +86,8 @@ def _process_notebook(
"PROJECT_ID": variable_project_id,
"REGION": variable_region,
"SERVICE_ACCOUNT": variable_service_account,
"VPC_NETWORK": variable_vpc_network,
},
)
unique_strings_preprocessor = NotebookProcessors.UniqueStringsPreprocessor()
# Use no-execute preprocessor
(
@@ -111,41 +96,11 @@ def _process_notebook(
) = remove_no_execute_cells_preprocessor.preprocess(nb)
(nb, resources) = update_variables_preprocessor.preprocess(nb, resources)
(nb, resources) = unique_strings_preprocessor.preprocess(nb, resources)
with open(notebook_path, mode="w", encoding="utf-8") as new_file:
nbformat.write(nb, new_file)
def _get_notebook_python_version(notebook_path: str) -> str:
"""
Get the python version for running the notebook if it is specified in
the notebook.
"""
python_version = PYTHON_VERSION
# Load the notebook
file = open(notebook_path)
src = file.read()
nb_json = json.loads(src)
# Iterate over the cells in the ipynb
for cell in nb_json["cells"]:
if cell["cell_type"] == "markdown":
markdown = str.join("", cell["source"])
# Look for the python version specification pattern
re_match = re.search(
"python version = (\d\.\d)", markdown, flags=re.IGNORECASE
)
if re_match:
# get the version number
python_version = re_match.group(1)
break
return python_version
def _create_tag(filepath: str) -> str:
tag = os.path.basename(os.path.normpath(filepath))
tag = re.sub("[^0-9a-zA-Z_.-]+", "-", tag)
@@ -166,9 +121,8 @@ def process_and_execute_notebook(
variable_project_id: str,
variable_region: str,
variable_service_account: str,
variable_vpc_network: Optional[str],
private_pool_id: Optional[str],
deadline: datetime.datetime,
deadline: datetime,
notebook: str,
should_get_tail_logs: bool = False,
) -> NotebookExecutionResult:
@@ -176,13 +130,6 @@ def process_and_execute_notebook(
print(f"Running notebook: {notebook}")
# Handle empty strings
if not variable_vpc_network:
variable_vpc_network = None
if not private_pool_id:
private_pool_id = None
# Create paths
notebook_output_uri = "/".join([artifacts_bucket, pathlib.Path(notebook).name])
@@ -196,7 +143,6 @@ def process_and_execute_notebook(
output_uri=notebook_output_uri,
log_url="",
build_id="",
logs_bucket="",
error_message=None,
)
@@ -204,19 +150,12 @@ def process_and_execute_notebook(
time_start = datetime.datetime.now()
operation = None
try:
# Get the python version for running the notebook if specified
notebook_exec_python_version = _get_notebook_python_version(
notebook_path=notebook
)
print(f"Running notebook with python {notebook_exec_python_version}")
# Pre-process notebook by substituting variable names
_process_notebook(
notebook_path=notebook,
variable_project_id=variable_project_id,
variable_region=variable_region,
variable_service_account=variable_service_account,
variable_vpc_network=variable_vpc_network,
)
# Upload the pre-processed code to a GCS bucket
@@ -236,13 +175,11 @@ def process_and_execute_notebook(
private_pool_id=private_pool_id,
private_pool_region=variable_region,
timeout_in_seconds=timeout_in_seconds,
python_version=notebook_exec_python_version,
)
operation_metadata = BuildOperationMetadata(mapping=operation.metadata)
result.build_id = operation_metadata.build.id
result.log_url = operation_metadata.build.log_url
result.logs_bucket = operation_metadata.build.logs_bucket
# Block and wait for the result
operation_result = operation.result()
@@ -322,8 +259,8 @@ def get_changed_notebooks(
notebooks = []
else:
print(f"Looking for all notebooks.")
notebooks_str = subprocess.check_output(["git", "ls-files"] + test_paths)
notebooks = notebooks_str.decode("utf-8").split("\n")
notebooks = subprocess.check_output(["git", "ls-files"] + test_paths)
notebooks = notebooks.decode("utf-8").split("\n")
notebooks = [notebook for notebook in notebooks if notebook.endswith(".ipynb")]
notebooks = [notebook for notebook in notebooks if len(notebook) > 0]
@@ -342,13 +279,12 @@ def process_and_execute_notebooks(
container_uri: str,
staging_bucket: str,
artifacts_bucket: str,
should_parallelize: bool,
timeout: int,
variable_project_id: str,
variable_region: str,
variable_service_account: str,
variable_vpc_network: Optional[str] = None,
private_pool_id: Optional[str] = None,
private_pool_id: Optional[str],
should_parallelize: bool,
timeout: int,
):
"""
Run the notebooks that exist under the folders defined in the test_paths_file.
@@ -384,7 +320,7 @@ def process_and_execute_notebooks(
seconds=max(timeout - WORKER_TIMEOUT_BUFFER_IN_SECONDS, 0)
)
if len(notebooks) >= 1:
if len(notebooks) > 1:
notebook_execution_results: List[NotebookExecutionResult] = []
print(f"Found {len(notebooks)} modified notebooks: {notebooks}")
@@ -406,7 +342,6 @@ def process_and_execute_notebooks(
variable_project_id,
variable_region,
variable_service_account,
variable_vpc_network,
private_pool_id,
deadline,
),
@@ -422,7 +357,6 @@ def process_and_execute_notebooks(
variable_project_id=variable_project_id,
variable_region=variable_region,
variable_service_account=variable_service_account,
variable_vpc_network=variable_vpc_network,
private_pool_id=private_pool_id,
deadline=deadline,
notebook=notebook,
@@ -448,47 +382,13 @@ def process_and_execute_notebooks(
format_timedelta(result.duration),
result.log_url,
result.output_uri,
result.output_uri_web,
result.logs_bucket,
]
for result in results_sorted
],
headers=[
"build_tag",
"status",
"duration",
"log_url",
"output_uri",
"output_uri_web",
"logs_bucket",
],
headers=["build_tag", "status", "duration", "log_url", "output_url"],
)
)
if len(notebooks) == 1:
print("=" * 100)
print("The notebook execution build log:\n")
print("=" * 100)
build_id = results_sorted[0].build_id
logs_bucket_name = (results_sorted[0].logs_bucket).removeprefix("gs://")
log_file_name = f"log-{build_id}.txt"
log_contents = util.download_blob_into_memory(
bucket_name=logs_bucket_name,
blob_name=log_file_name,
download_as_text=True,
)
# Remove extra steps from the log
match = re.search("starting Step #4", log_contents, flags=re.IGNORECASE)
if match is not None:
match_index = match.span()[0]
print(log_contents[match_index:])
else:
print(log_contents)
print("\n=== END RESULTS===\n")
total_notebook_duration = functools.reduce(
@@ -504,5 +404,24 @@ def process_and_execute_notebooks(
# Raise error if any notebooks failed
if not all([result.is_pass for result in results_sorted]):
raise RuntimeError("Notebook failures detected. See logs for details")
elif len(notebooks) == 1:
notebook = notebooks[0]
# Pre-process notebook by substituting variable names
_process_notebook(
notebook_path=notebook,
variable_project_id=variable_project_id,
variable_region=variable_region,
variable_service_account=variable_service_account,
)
execute_notebook_helper.execute_notebook(
notebook_source=notebook,
output_file_or_uri="/".join(
[artifacts_bucket, pathlib.Path(notebook).name]
),
should_log_output=True,
)
else:
print("No notebooks modified in this pull request.")
+4 -15
View File
@@ -26,9 +26,6 @@ from utils import util
# This script is used to execute a notebook and write out the output notebook.
# This is used to force papermill to use this kernel to run the notebook instead of any defined inside the notebook itself
DEFAULT_KERNEL_NAME = "python3"
def execute_notebook(
notebook_source: str,
@@ -53,17 +50,6 @@ def execute_notebook(
execution_exception = None
print("\n=== DOWNLOAD EXECUTED NOTEBOOK ===\n")
print(f"Please debug the executed notebook by downloading the executed notebook:")
print("Option 1. Using gsutil. Run the following command in your terminal.")
print(f'\tgsutil cp "{output_file_or_uri}" .')
print("Option 2. Using this link.")
print(f"\thttps://storage.googleapis.com/{output_file_or_uri[5:]}")
print("\n======\n")
# Execute notebook
try:
# Execute notebook
@@ -72,7 +58,6 @@ def execute_notebook(
output_path=notebook_source,
progress_bar=should_log_output,
request_save_on_cell_execute=should_log_output,
kernel_name=DEFAULT_KERNEL_NAME,
log_output=should_log_output,
stdout_file=sys.stdout if should_log_output else None,
stderr_file=sys.stderr if should_log_output else None,
@@ -86,6 +71,10 @@ def execute_notebook(
util.upload_file(notebook_source, remote_file_path=output_file_or_uri)
print("\n=== EXECUTION FINISHED ===\n")
print(
f"Please debug the executed notebook by downloading: {output_file_or_uri}"
)
print("\n======\n")
else:
# Create directories if they don't exist
if not os.path.exists(os.path.dirname(output_file_or_uri)):
-5
View File
@@ -40,7 +40,6 @@ def execute_notebook_remote(
private_pool_region: Optional[str],
tag: Optional[str],
timeout_in_seconds: Optional[int] = None,
python_version: Optional[str] = None
) -> operation.Operation:
"""Create and execute a single notebook on Google Cloud Build"""
# Load build steps from YAML
@@ -51,12 +50,8 @@ def execute_notebook_remote(
"_PYTHON_IMAGE": container_uri,
"_NOTEBOOK_GCS_URI": notebook_uri,
"_NOTEBOOK_OUTPUT_GCS_URI": notebook_output_uri,
"_PYTHON_VERSION" : f"python{python_version}"
}
if python_version is not None:
substitutions["_PYTHON_VERSION"] = "python" + python_version
build = cloudbuild_v1.Build()
options: Optional[client_options.ClientOptions] = None
@@ -4,35 +4,43 @@ steps:
entrypoint: /bin/sh
args:
- -c
- 'gcloud config list --quiet'
- 'gcloud config list'
# Check the Python version
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- ${_PYTHON_VERSION} .cloud-build/CheckPythonVersion.py -q
- python3 .cloud-build/CheckPythonVersion.py
# Create a virtual environment
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- ${_PYTHON_VERSION} -m venv workspace/env
- python3 -m venv workspace/env
# Install Python dependencies
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- -c
- . workspace/env/bin/activate &&
python -m pip -q install -U pip &&
python -m pip -q install -U -r .cloud-build/requirements.txt
# Install Python dependencies and run testing script
python3 -m pip install -U pip &&
python3 -m pip install -U -r .cloud-build/requirements.txt
# pip freeze
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- |
. workspace/env/bin/activate &&
python .cloud-build/execute_notebook_cli.py --notebook_source "${_NOTEBOOK_GCS_URI}" --output_file_or_uri "${_NOTEBOOK_OUTPUT_GCS_URI}"
python3 -m pip freeze
# Install Python dependencies and run testing script
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- |
. workspace/env/bin/activate &&
python3 .cloud-build/execute_notebook_cli.py --notebook_source "${_NOTEBOOK_GCS_URI}" --output_file_or_uri "${_NOTEBOOK_OUTPUT_GCS_URI}"
env:
- 'IS_TESTING=1'
timeout: 86400s
timeout: 86400s
@@ -4,16 +4,16 @@ steps:
entrypoint: /bin/sh
args:
- -c
- gcloud config list --quiet
- gcloud config list
# Check the Python version
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- python3 .cloud-build/CheckPythonVersion.py -q
- python3 .cloud-build/CheckPythonVersion.py
# Fetch full repo for diff purposes
- name: gcr.io/cloud-builders/git
args: [fetch, --unshallow, --quiet]
args: [fetch, --unshallow]
# Create a virtual environment
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
@@ -24,22 +24,30 @@ steps:
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- -c
- . workspace/env/bin/activate &&
python3 -m pip -q install -U pip &&
python3 -m pip -q install -U -r .cloud-build/requirements.txt
# Install Python dependencies and run testing script
# TODO: Only pass in private_pool_id if it is set
python3 -m pip install -U pip &&
python3 -m pip install -U -r .cloud-build/requirements.txt
# pip freeze
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- |
. workspace/env/bin/activate &&
python3 .cloud-build/execute_changed_notebooks_cli.py --test_paths_file "${_TEST_PATHS_FILE}" --base_branch "${_FORCED_BASE_BRANCH}" --container_uri ${_PYTHON_IMAGE} --staging_bucket ${_GCS_STAGING_BUCKET} --artifacts_bucket ${_GCS_STAGING_BUCKET}/executed_notebooks/PR_${_PR_NUMBER}/BUILD_${BUILD_ID} --variable_project_id ${PROJECT_ID} --variable_region ${_GCP_REGION} --variable_service_account ${_GCP_SERVICE_ACCOUNT} --variable_vpc_network "${_GPC_VPC_NETWORK_NAME}" `if [ ! -z "${_PRIVATE_POOL_NAME}" ]; then echo "--private_pool_id ${_PRIVATE_POOL_NAME}"; fi`
python3 -m pip freeze
# Install Python dependencies and run testing script
# TODO: Only pass in private_pool_id if it is set
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- |
. workspace/env/bin/activate &&
python3 .cloud-build/execute_changed_notebooks_cli.py --test_paths_file "${_TEST_PATHS_FILE}" --base_branch "${_FORCED_BASE_BRANCH}" --container_uri ${_PYTHON_IMAGE} --staging_bucket ${_GCS_STAGING_BUCKET} --artifacts_bucket ${_GCS_STAGING_BUCKET}/executed_notebooks/PR_${_PR_NUMBER}/BUILD_${BUILD_ID} --variable_project_id ${PROJECT_ID} --variable_region ${_GCP_REGION} --variable_service_account ${_GCP_SERVICE_ACCOUNT} `if [ ! -z "${_PRIVATE_POOL_NAME}" ]; then echo "--private_pool_id ${_PRIVATE_POOL_NAME}"; fi`
env:
- 'IS_TESTING=1'
timeout: 86400s
options:
pool:
name: ${_PRIVATE_POOL_NAME}
name: ${_PRIVATE_POOL_NAME}
+2 -2
View File
@@ -1,5 +1,5 @@
notebooks/official/vizier/gapic-vizier-multi-objective-optimization.ipynb
notebooks/official/pipelines/lightweight_functions_component_io_kfp.ipynb
notebooks/official/matching_engine/intro-swivel.ipynb
notebooks/official/ml_metadata/sdk-metric-parameter-tracking-for-locally-trained-models.ipynb
notebooks/official/custom/custom-tabular-bq-managed-dataset.ipynb
.cloud-build/tests/python_version_test.ipynb
notebooks/official/pipelines/metrics_viz_run_compare_kfp.ipynb
-1
View File
@@ -1 +0,0 @@
notebooks/official/custom/custom-tabular-bq-managed-dataset.ipynb
@@ -1,61 +0,0 @@
{
"cells": [
{
"cell_type": "markdown",
"metadata": {
"id": "57a3d44ed8a8"
},
"source": [
"### Set up your Google Cloud project\n",
"\n",
"**_NOTE_**: This notebook has been tested in the following environment:\n",
"\n",
"* Python version = 3.7\n",
"\n",
"**The following steps are required, regardless of your notebook environment.**\n",
"\n",
"1. [Select or create a Google Cloud project](https://console.cloud.google.com/cloud-resource-manager). When you first create an account, you get a $300 free credit towards your compute/storage costs.\n",
"\n",
"1. [Make sure that billing is enabled for your project](https://cloud.google.com/billing/docs/how-to/modify-project).\n",
"\n",
"1. [Enable the Vertex AI API and Compute Engine API](https://console.cloud.google.com/flows/enableapi?apiid=aiplatform.googleapis.com,compute_component).\n",
"\n",
"1. If you are running this notebook locally, you will need to install the [Cloud SDK](https://cloud.google.com/sdk).\n",
"\n",
"1. Enter your project ID in the cell below. Then run the cell to make sure the\n",
"Cloud SDK uses the right project for all the commands in this notebook.\n",
"\n",
"**Note**: Jupyter runs lines prefixed with `!` as shell commands, and it interpolates Python variables prefixed with `$` into these commands."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "c6516f90311b"
},
"outputs": [],
"source": [
"# test if the right python version is being used\n",
"import sys\n",
"\n",
"actual_python_version = f\"{sys.version_info.major}.{sys.version_info.minor}\"\n",
"print(f\"Runtime python version: {actual_python_version}\")\n",
"\n",
"assert actual_python_version == \"3.7\", \"Wrong python version!\""
]
}
],
"metadata": {
"colab": {
"name": "python_version_test.ipynb",
"toc_visible": true
},
"kernelspec": {
"display_name": "Python 3",
"name": "python3"
}
},
"nbformat": 4,
"nbformat_minor": 0
}
-35
View File
@@ -14,8 +14,6 @@
# limitations under the License.
from typing import Dict
import random
import string
from nbconvert.preprocessors import Preprocessor
@@ -65,36 +63,3 @@ class UpdateVariablesPreprocessor(Preprocessor):
executable_cells.append(cell)
notebook.cells = executable_cells
return notebook, resources
# Generate a uuid of a specifed length
def generate_uuid(length: int = 8) -> str:
return "".join(random.choices(string.ascii_lowercase + string.digits, k=length))
class UniqueStringsPreprocessor(Preprocessor):
# A preprocessor that replaces strings that end with "-unique" or "_unique" with a uuid.
@staticmethod
def update_unique_strings(content: str):
# Replace strings that end with "-unique" or "_unique" with a uuid.
unique_id = generate_uuid()
return (
content.replace('-unique"', f'-{unique_id}"')
.replace("-unique'", f'-{unique_id}"')
.replace('_unique"', f'_{unique_id}"')
.replace("_unique'", f'_{unique_id}"')
)
def preprocess(self, notebook, resources=None):
executable_cells = []
for cell in notebook.cells:
if cell.cell_type == "code":
cell.source = self.update_unique_strings(
content=cell.source,
)
executable_cells.append(cell)
notebook.cells = executable_cells
return notebook, resources
@@ -40,3 +40,65 @@ def get_updated_value(content: str, variable_name: str, variable_value: str) ->
content,
flags=re.M,
)
def test_update_value():
new_content = get_updated_value(
content='asdf\nPROJECT_ID = "[your-project-id]" #@param {type:"string"} \nasdf',
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert (
new_content
== 'asdf\nPROJECT_ID = "sample-project" #@param {type:"string"} \nasdf'
)
def test_update_value_single_quotes():
new_content = get_updated_value(
content="PROJECT_ID = '[your-project-id]'",
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert new_content == "PROJECT_ID = 'sample-project'"
def test_update_value_avoidance():
new_content = get_updated_value(
content="PROJECT_ID = shell_output[0] ",
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert new_content == "PROJECT_ID = shell_output[0] "
def test_region():
new_content = get_updated_value(
content='REGION = "[your-region]" # @param {type:"string"}',
variable_name="REGION",
variable_value="us-central1",
)
assert new_content == 'REGION = "us-central1" # @param {type:"string"}'
def test_region_equal_equals_ignore():
# Tests that == is ignored
new_content = get_updated_value(
content='REGION == "[your-region]" # @param {type:"string"}',
variable_name="REGION",
variable_value="us-central1",
)
assert new_content == 'REGION == "[your-region]" # @param {type:"string"}'
def test_service_account():
# Tests that == is ignored
new_content = get_updated_value(
content='SERVICE_ACCOUNT = "[your-service-account]" # @param {type:"string"}',
variable_name="SERVICE_ACCOUNT",
variable_value="12345-compute@developer.gserviceaccount.com",
)
assert (
new_content
== 'SERVICE_ACCOUNT = "12345-compute@developer.gserviceaccount.com" # @param {type:"string"}'
)
@@ -1,14 +0,0 @@
from utils import NotebookProcessors
def test_update_value():
# Test that the content was updated
preprocessor = NotebookProcessors.UniqueStringsPreprocessor()
content = 'PROJECT_ID = "your-project-id-unique"'
new_content = preprocessor.update_unique_strings(content)
assert new_content != content
assert new_content.startswith('PROJECT_ID = "your-project-id-')
assert new_content.endswith('"')
@@ -1,63 +0,0 @@
from utils import UpdateNotebookVariables
def test_update_value():
new_content = UpdateNotebookVariables.get_updated_value(
content='asdf\nPROJECT_ID = "[your-project-id]" #@param {type:"string"} \nasdf',
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert (
new_content
== 'asdf\nPROJECT_ID = "sample-project" #@param {type:"string"} \nasdf'
)
def test_update_value_single_quotes():
new_content = UpdateNotebookVariables.get_updated_value(
content="PROJECT_ID = '[your-project-id]'",
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert new_content == "PROJECT_ID = 'sample-project'"
def test_update_value_avoidance():
new_content = UpdateNotebookVariables.get_updated_value(
content="PROJECT_ID = shell_output[0] ",
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert new_content == "PROJECT_ID = shell_output[0] "
def test_region():
new_content = UpdateNotebookVariables.get_updated_value(
content='REGION = "[your-region]" # @param {type:"string"}',
variable_name="REGION",
variable_value="us-central1",
)
assert new_content == 'REGION = "us-central1" # @param {type:"string"}'
def test_region_equal_equals_ignore():
# Tests that == is ignored
new_content = UpdateNotebookVariables.get_updated_value(
content='REGION == "[your-region]" # @param {type:"string"}',
variable_name="REGION",
variable_value="us-central1",
)
assert new_content == 'REGION == "[your-region]" # @param {type:"string"}'
def test_service_account():
# Tests that == is ignored
new_content = UpdateNotebookVariables.get_updated_value(
content='SERVICE_ACCOUNT = "[your-service-account]" # @param {type:"string"}',
variable_name="SERVICE_ACCOUNT",
variable_value="12345-compute@developer.gserviceaccount.com",
)
assert (
new_content
== 'SERVICE_ACCOUNT = "12345-compute@developer.gserviceaccount.com" # @param {type:"string"}'
)
+1 -27
View File
@@ -3,7 +3,7 @@ import subprocess
import tarfile
import uuid
from datetime import datetime
from typing import Optional, Union
from typing import Optional
from google.auth import credentials as auth_credentials
from google.cloud import storage
@@ -58,29 +58,3 @@ def archive_code_and_upload(staging_bucket: str):
print(f"Uploaded source code archive to {source_archived_file_gcs}")
return source_archived_file_gcs
def download_blob_into_memory(
bucket_name: str, blob_name: str, download_as_text: Optional[bool] = False
) -> Union[bytes, str]:
"""
Downloads a blob into memory as byte or as text if
download_as_text is set to True.
"""
storage_client = storage.Client()
bucket = storage_client.bucket(bucket_name)
# Construct a client side representation of a blob.
blob = bucket.blob(blob_name)
# Download the blob content
if download_as_text:
contents = blob.download_as_text()
else:
contents = blob.download_as_bytes()
print(f"Downloaded storage object {blob_name} from bucket {bucket_name}.")
return contents
+3 -13
View File
@@ -1,11 +1,4 @@
**REQUIRED:** Add a summary of your PR here, typically including why the change is needed and what was changed. Include any design alternatives for discussion purposes.
<br>
--- YOUR PR SUMMARY GOES HERE ---
<br><br><br>
**REQUIRED:** Fill out the below checklists or remove if irrelevant
1. If you are opening a PR for `Official Notebooks` under the [notebooks/official](https://github.com/GoogleCloudPlatform/vertex-ai-samples/tree/main/notebooks/official) folder, follow this mandatory checklist:
If you are opening a PR for `Official Notebooks` under the [notebooks/official](https://github.com/GoogleCloudPlatform/vertex-ai-samples/tree/main/notebooks/official) folder, follow this mandatory checklist:
- [ ] Use the [notebook template](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/notebook_template.ipynb) as a starting point.
- [ ] Follow the style and grammar rules outlined in the above notebook template.
- [ ] Verify the notebook runs successfully in Colab since the automated tests cannot guarantee this even when it passes.
@@ -14,15 +7,12 @@
- [ ] This notebook has been added to the [CODEOWNERS](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/official/CODEOWNERS) file under the `Official Notebooks` section, pointing to the author or the author's team.
- [ ] The Jupyter notebook cleans up any artifacts it has created (datasets, ML models, endpoints, etc) so as not to eat up unnecessary resources.
<br>
2. If you are opening a PR for `Community Notebooks` under the [notebooks/community](https://github.com/GoogleCloudPlatform/vertex-ai-samples/tree/main/notebooks/community) folder:
If you are opening a PR for `Community Notebooks` under the [notebooks/community](https://github.com/GoogleCloudPlatform/vertex-ai-samples/tree/main/notebooks/community) folder:
- [ ] This notebook has been added to the [CODEOWNERS](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/CODEOWNERS) file under the `Community Notebooks` section, pointing to the author or the author's team.
- [ ] Passes all the required formatting and linting checks. You can locally test with these [instructions](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/CONTRIBUTING.md#code-quality-checks).
<br>
3. If you are opening a PR for `Community Content` under the [community-content](https://github.com/GoogleCloudPlatform/vertex-ai-samples/tree/main/community-content) folder:
If you are opening a PR for `Community Content` under the [community-content](https://github.com/GoogleCloudPlatform/vertex-ai-samples/tree/main/community-content) folder:
- [ ] Make sure your main `Content Directory Name` is descriptive, informative, and includes some of the key products and attributes of your content, so that it is differentiable from other content
- [ ] The main content directory has been added to the [CODEOWNERS](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/community-content/CODEOWNERS) file under the `Community Content` section, pointing to the author or the author's team.
- [ ] Passes all the required formatting and linting checks. You can locally test with these [instructions](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/CONTRIBUTING.md#code-quality-checks).
-20
View File
@@ -1,20 +0,0 @@
# To use this image, run this command with the desired notebook args from the top-level vertex-ai-samples directory:
# 1. To lint all changed notebooks:
# docker run -v ${PWD}:/setup/app gcr.io/python-docs-samples-tests/notebook_linter:latest
# 2. To lint specific notebooks:
# docker run -v ${PWD}:/setup/app gcr.io/python-docs-samples-tests/notebook_linter:latest notebooks/1.ipynb notebooks/2.ipynb
FROM python:3.10
WORKDIR setup
COPY ./requirements.txt .
COPY ./run_linter.sh .
# Install dependencies.
RUN pip install --upgrade pip
RUN pip install -r requirements.txt
WORKDIR app
ENTRYPOINT ["/setup/run_linter.sh"]
+3 -3
View File
@@ -2,9 +2,9 @@ git+https://github.com/tensorflow/docs
ipython
jupyter
nbconvert
black==22.10.0
pyupgrade==2.38.4
black==22.3.0
pyupgrade==2.34.0
isort==5.10.1
flake8==4.0.1
nbqa==1.5.3
nbqa==1.4.0
+4 -14
View File
@@ -47,22 +47,12 @@ done
echo "Test mode: $is_test"
# Read in user-provided notebooks
notebooks=()
for arg in "$@"; do
if [[ $arg == *.ipynb ]]; then
notebooks+=("$arg")
fi
done
# Only check notebooks in test folders modified in this pull request.
# Note: Use process substitution to persist the data in the array
if [ ${#notebooks[@]} -eq 0 ]; then
echo "Checking for changed notebooked using git"
while read -r file || [ -n "$line" ]; do
notebooks+=("$file")
done < <(git diff --name-only main... | grep '\.ipynb$')
fi
notebooks=()
while read -r file || [ -n "$line" ]; do
notebooks+=("$file")
done < <(git diff --name-only main... | grep '\.ipynb$')
problematic_notebooks=()
if [ ${#notebooks[@]} -gt 0 ]; then
-3
View File
@@ -1,10 +1,7 @@
* @vertex-ai-samples-contributors @GoogleCloudPlatform/cloudml-samples-owners
/tf_agents_bandits_movie_recommendation_with_kfp_and_vertex_sdk @yinghsienwu
/pytorch_pre_built_images_deployment @googleapis/vertex-prediction-team
/pytorch_text_classification_using_vertex_sdk_and_gcloud @RajeshThallam
/pytorch_text_classification_using_vertex_sdk_and_gcloud @RajeshThallam @ultrons
/sklearn_text_classification_from_script_using_vertex_sdk @maxhardt
/pluto_on_workbench @wkharold
/cpr-examples @samthrasher
/Train_tabular_models_with_many_frameworks_and_import_to_Vertex_AI_using_Pipelines @Ark-kun
/pipeline_components @Ark-kun
@@ -1,83 +0,0 @@
name: Train tabular classification logistic regression model using Scikit learn pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_logistic_regression_model_using_Scikit_learn_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
componentRef:
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: '> 0'
new_column_name: class
annotations:
editor.position: '{"x":40,"y":380,"width":180,"height":54}'
Train logistic regression model using scikit learn from CSV:
componentRef:
digest: a864625a822e4b1c8ef6fe4ae1454fd90f15438f70a6712bb4c30e0dda4d35b7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/cb44b75c9c062fcc40c2b905b2024b4493dbc62b/components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
label_column_name: class
annotations:
editor.position: '{"x":40,"y":510,"width":180,"height":70}'
Upload Scikit learn pickle model to Google Cloud Vertex AI:
componentRef:
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train logistic regression model using scikit learn from CSV
type: ScikitLearnPickleModel
annotations:
editor.position: '{"x":40,"y":660,"width":180,"height":70}'
outputValues: {}
@@ -1,73 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
train_logistic_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml")
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_logistic_regression_model_using_Scikit_learn_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
training_data = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
training_data = select_columns_using_Pandas_on_CSV_data_op(
table=training_data,
column_names=all_columns,
).outputs["transformed_table"]
# Cleaning the NaN values.
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=training_data,
replacement_value="0",
#replacement_type_name="float",
).outputs["transformed_table"]
classification_training_data = binarize_column_using_Pandas_on_CSV_data_op(
table=training_data,
column_name=label_column,
predicate="> 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
model = train_logistic_regression_model_using_scikit_learn_from_CSV_op(
dataset=classification_training_data,
label_column_name=classification_label_column,
# Optional:
#penalty="l2",
#solver="lbfgs",
#max_iterations=100,
#multi_class_mode="auto",
#random_seed=0,
).outputs["model"]
vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_classification_logistic_regression_model_using_Scikit_learn_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,114 +0,0 @@
name: Train tabular classification model using PyTorch pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_PyTorch_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":240,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":240,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":240,"y":250,"width":180,"height":54}'
Create fully connected pytorch network:
componentRef:
digest: d03d8248fd358a0275ec33568ee7dd7dce576cc112b09dfafe2651e4d97e04a9
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
output_activation_name: sigmoid
annotations:
editor.position: '{"x":40,"y":360,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
componentRef:
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: ' > 0'
new_column_name: class
annotations:
editor.position: '{"x":240,"y":360,"width":180,"height":54}'
Train pytorch model from csv:
componentRef:
digest: 40f3185eb61e9727f41a4e0c05dd3d3b44bd802aa0f378cfc31756560033949a
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/d8c4cf5e6403bc65bcf8d606e6baf87e2528a3dc/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Create fully connected pytorch network
type: PyTorchScriptModule
training_data:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
label_column_name: class
loss_function_name: binary_cross_entropy
annotations:
editor.position: '{"x":240,"y":490,"width":180,"height":40}'
Create PyTorch Model Archive with base handler:
componentRef:
digest: 8298b5ee1b0f0879f893add4cf352c8dec7cf9e21bb9db134c91a2d046cdb0ec
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/46d51383e6554b7f3ab4fd8cf614d8c2b422fb22/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml
arguments:
Model:
taskOutput:
outputName: trained_model
taskId: Train pytorch model from csv
type: PyTorchScriptModule
Model name: model
Model version: '1.0'
annotations:
editor.position: '{"x":240,"y":590,"width":180,"height":54}'
Upload PyTorch model archive to Google Cloud Vertex AI:
componentRef:
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model_archive:
taskOutput:
outputName: Model archive
taskId: Create PyTorch Model Archive with base handler
type: PyTorchModelArchive
annotations:
editor.position: '{"x":240,"y":720,"width":180,"height":70}'
outputValues: {}
@@ -1,95 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_model_using_PyTorch_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
training_data = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
training_data = select_columns_using_Pandas_on_CSV_data_op(
table=training_data,
column_names=all_columns,
).outputs["transformed_table"]
# Cleaning the NaN values.
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=training_data,
replacement_value="0",
#replacement_type_name="float",
).outputs["transformed_table"]
classification_training_data = binarize_column_using_Pandas_on_CSV_data_op(
table=training_data,
column_name=label_column,
predicate=" > 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
network = create_fully_connected_pytorch_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
output_activation_name="sigmoid",
# output_size=1,
).outputs["model"]
model = train_pytorch_model_from_csv_op(
model=network,
training_data=classification_training_data,
label_column_name=classification_label_column,
loss_function_name="binary_cross_entropy",
# Optional:
#number_of_epochs=1,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#batch_log_interval=100,
#random_seed=0,
).outputs["trained_model"]
model_archive = create_pytorch_model_archive_with_base_handler_op(
model=model,
# Optional:
# model_name="model",
# model_version="1.0",
).outputs["Model archive"]
vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
model_archive=model_archive,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_classification_model_using_PyTorch_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,132 +0,0 @@
name: Train tabular classification model using TensorFlow pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_TensorFlow_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
componentRef:
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: ' > 0'
new_column_name: class
annotations:
editor.position: '{"x":40,"y":370,"width":180,"height":54}'
Split rows into subsets:
componentRef:
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":170,"y":500,"width":180,"height":40}'
Create fully connected tensorflow network:
componentRef:
digest: bfcafbc5ce711b1f69cabf1338212d10d50136a73db9f9f7c984de7b80b4bfb0
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
output_activation_name: sigmoid
annotations:
editor.position: '{"x":370,"y":500,"width":180,"height":54}'
Train model using Keras on CSV:
componentRef:
digest: 42ae60c889034dbad74815653e95b4f7d576b5f47f803173e8679c7b54984609
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c504a4010348c50eaaf6d4337586ccc008f4dcef/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Create fully connected tensorflow network
type: TensorflowSavedModel
label_column_name: class
loss_function_name: binary_crossentropy
number_of_epochs: '10'
annotations:
editor.position: '{"x":40,"y":620,"width":180,"height":54}'
Upload Tensorflow model to Google Cloud Vertex AI:
componentRef:
digest: 2e45263ff640b1a688e359b6936e27a81b2407749a84f340af2aa5547e0cb92c
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
annotations:
editor.position: '{"x":40,"y":750,"width":180,"height":54}'
Predict with TensorFlow model on CSV data:
componentRef:
digest: 921bb1563e93a78233b8acceab87055b9154ccf5595d056028cf0396ca224cd4
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/59c759ce6f543184e30db6817d2a703879bc0f39/components/tensorflow/Predict/on_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
label_column_name: class
annotations:
editor.position: '{"x":240,"y":750,"width":180,"height":54}'
outputValues: {}
@@ -1,106 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_model_using_TensorFlow_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
classification_dataset = binarize_column_using_Pandas_on_CSV_data_op(
table=dataset,
column_name=label_column,
predicate=" > 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=classification_dataset,
fraction_1=training_set_fraction,
)
classification_training_data = split_task.outputs["split_1"]
classification_testing_data = split_task.outputs["split_2"]
network = create_fully_connected_tensorflow_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
output_activation_name="sigmoid",
# output_size=1,
).outputs["model"]
model = train_model_using_Keras_on_CSV_op(
training_data=classification_training_data,
model=network,
label_column_name=classification_label_column,
# Optional:
loss_function_name="binary_crossentropy",
number_of_epochs=10,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#metric_names=["mean_absolute_error"],
#random_seed=0,
).outputs["trained_model"]
predictions = predict_with_TensorFlow_model_on_CSV_data_op(
dataset=classification_testing_data,
model=model,
# label_column_name needs to be set when doing prediction on a dataset that has labels
label_column_name=classification_label_column,
# Optional:
# batch_size=1000,
).outputs["predictions"]
vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_classification_model_using_TensorFlow_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,115 +0,0 @@
name: Train tabular classification model using XGBoost pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_XGBoost_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
componentRef:
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: '> 0'
new_column_name: class
annotations:
editor.position: '{"x":40,"y":380,"width":180,"height":54}'
Split rows into subsets:
componentRef:
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":170,"y":510,"width":180,"height":40}'
Train XGBoost model on CSV:
componentRef:
digest: 538c5a01eb38deaf532d619f0bbeaff4efc550fe1f0f776fc06791097b68ceac
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: class
objective: binary:logistic
annotations:
editor.position: '{"x":40,"y":630,"width":180,"height":40}'
Upload XGBoost model to Google Cloud Vertex AI:
componentRef:
digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
annotations:
editor.position: '{"x":40,"y":750,"width":180,"height":54}'
Xgboost predict on CSV:
componentRef:
digest: 0876233a0c7306fefec188bd70f059b46d1fb5aa57be231799570e3bbbdd0d95
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/4694ec97baccf59284c2a1db4aa2250c22291eab/components/XGBoost/Predict/component.yaml
arguments:
data:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
label_column_name: class
annotations:
editor.position: '{"x":240,"y":750,"width":180,"height":40}'
outputValues: {}
@@ -1,94 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_model_using_XGBoost_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
classification_dataset = binarize_column_using_Pandas_on_CSV_data_op(
table=dataset,
column_name=label_column,
predicate="> 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=classification_dataset,
fraction_1=training_set_fraction,
)
classification_training_data = split_task.outputs["split_1"]
classification_testing_data = split_task.outputs["split_2"]
model = train_XGBoost_model_on_CSV_op(
training_data=classification_training_data,
label_column_name=classification_label_column,
objective="binary:logistic",
# Optional:
#starting_model=None,
#num_iterations=10,
#booster_params={},
#booster="gbtree",
#learning_rate=0.3,
#min_split_loss=0,
#max_depth=6,
).outputs["model"]
# Predicting on the testing data
predictions = xgboost_predict_on_CSV_op(
data=classification_testing_data,
model=model,
# label_column needs to be set when doing prediction on a dataset that has labels
label_column_name=classification_label_column,
).outputs["predictions"]
vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_classification_model_using_XGBoost_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,257 +0,0 @@
name: Train tabular classification model using all frameworks pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_all_frameworks_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
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arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":550,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":550,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":550,"y":250,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
componentRef:
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: ' > 0'
new_column_name: class
annotations:
editor.position: '{"x":550,"y":380,"width":180,"height":54}'
Split rows into subsets:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":550,"y":490,"width":180,"height":40}'
Create fully connected pytorch network:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
output_activation_name: sigmoid
annotations:
editor.position: '{"x":380,"y":620,"width":180,"height":54}'
Create fully connected tensorflow network:
componentRef:
digest: bfcafbc5ce711b1f69cabf1338212d10d50136a73db9f9f7c984de7b80b4bfb0
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
output_activation_name: sigmoid
annotations:
editor.position: '{"x":40,"y":630,"width":180,"height":54}'
Train model using Keras on CSV:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c504a4010348c50eaaf6d4337586ccc008f4dcef/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Create fully connected tensorflow network
type: TensorflowSavedModel
label_column_name: class
loss_function_name: binary_crossentropy
number_of_epochs: '10'
annotations:
editor.position: '{"x":40,"y":750,"width":180,"height":54}'
Train pytorch model from csv:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/d8c4cf5e6403bc65bcf8d606e6baf87e2528a3dc/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Create fully connected pytorch network
type: PyTorchScriptModule
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: class
loss_function_name: binary_cross_entropy
annotations:
editor.position: '{"x":380,"y":750,"width":180,"height":40}'
Train XGBoost model on CSV:
componentRef:
digest: 538c5a01eb38deaf532d619f0bbeaff4efc550fe1f0f776fc06791097b68ceac
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: class
objective: binary:logistic
annotations:
editor.position: '{"x":720,"y":750,"width":180,"height":40}'
Train logistic regression model using scikit learn from CSV:
componentRef:
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arguments:
dataset:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: class
annotations:
editor.position: '{"x":1030,"y":750,"width":180,"height":70}'
Predict with TensorFlow model on CSV data:
componentRef:
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arguments:
dataset:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
label_column_name: class
annotations:
editor.position: '{"x":160,"y":880,"width":180,"height":54}'
Create PyTorch Model Archive with base handler:
componentRef:
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arguments:
Model:
taskOutput:
outputName: trained_model
taskId: Train pytorch model from csv
type: PyTorchScriptModule
Model name: model
Model version: '1.0'
annotations:
editor.position: '{"x":380,"y":880,"width":180,"height":54}'
Xgboost predict on CSV:
componentRef:
digest: 0876233a0c7306fefec188bd70f059b46d1fb5aa57be231799570e3bbbdd0d95
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/4694ec97baccf59284c2a1db4aa2250c22291eab/components/XGBoost/Predict/component.yaml
arguments:
data:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
label_column_name: class
annotations:
editor.position: '{"x":810,"y":880,"width":180,"height":40}'
Upload Scikit learn pickle model to Google Cloud Vertex AI:
componentRef:
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train logistic regression model using scikit learn from CSV
type: ScikitLearnPickleModel
annotations:
editor.position: '{"x":1030,"y":880,"width":180,"height":70}'
Upload Tensorflow model to Google Cloud Vertex AI:
componentRef:
digest: 2e45263ff640b1a688e359b6936e27a81b2407749a84f340af2aa5547e0cb92c
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
annotations:
editor.position: '{"x":40,"y":1010,"width":180,"height":54}'
Upload PyTorch model archive to Google Cloud Vertex AI:
componentRef:
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model_archive:
taskOutput:
outputName: Model archive
taskId: Create PyTorch Model Archive with base handler
type: PyTorchModelArchive
annotations:
editor.position: '{"x":380,"y":1010,"width":180,"height":70}'
Upload XGBoost model to Google Cloud Vertex AI:
componentRef:
digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
annotations:
editor.position: '{"x":720,"y":1010,"width":180,"height":54}'
outputValues: {}
@@ -1,224 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
# TensorFlow
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
# PyTorch
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
# XGBoost
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
# Scikit-learn
#train_linear_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml")
train_logistic_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml")
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
# Vertex AI
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_model_using_all_frameworks_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
classification_dataset = binarize_column_using_Pandas_on_CSV_data_op(
table=dataset,
column_name=label_column,
predicate=" > 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=classification_dataset,
fraction_1=training_set_fraction,
)
classification_training_data = split_task.outputs["split_1"]
classification_testing_data = split_task.outputs["split_2"]
# TensorFlow
tensorflow_network = create_fully_connected_tensorflow_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
output_activation_name="sigmoid",
# output_size=1,
).outputs["model"]
tensorflow_model = train_model_using_Keras_on_CSV_op(
training_data=classification_training_data,
model=tensorflow_network,
label_column_name=classification_label_column,
# Optional:
loss_function_name="binary_crossentropy",
number_of_epochs=10,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#metric_names=["mean_absolute_error"],
#random_seed=0,
).outputs["trained_model"]
tensorflow_predictions = predict_with_TensorFlow_model_on_CSV_data_op(
dataset=classification_testing_data,
model=tensorflow_model,
# label_column_name needs to be set when doing prediction on a dataset that has labels
label_column_name=classification_label_column,
# Optional:
# batch_size=1000,
).outputs["predictions"]
tensorflow_vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
model=tensorflow_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
tensorflow_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=tensorflow_vertex_model_name,
).outputs["endpoint_name"]
# PyTorch
pytorch_network = create_fully_connected_pytorch_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
output_activation_name="sigmoid",
# output_size=1,
).outputs["model"]
pytorch_model = train_pytorch_model_from_csv_op(
model=pytorch_network,
training_data=classification_training_data,
label_column_name=classification_label_column,
loss_function_name="binary_cross_entropy",
# Optional:
#number_of_epochs=1,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#batch_log_interval=100,
#random_seed=0,
).outputs["trained_model"]
pytorch_model_archive = create_pytorch_model_archive_with_base_handler_op(
model=pytorch_model,
# Optional:
# model_name="model",
# model_version="1.0",
).outputs["Model archive"]
pytorch_vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
model_archive=pytorch_model_archive,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
pytorch_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=pytorch_vertex_model_name,
).outputs["endpoint_name"]
# XGBoost
xgboost_model = train_XGBoost_model_on_CSV_op(
training_data=classification_training_data,
label_column_name=classification_label_column,
objective="binary:logistic",
# Optional:
#starting_model=None,
#num_iterations=10,
#booster_params={},
#booster="gbtree",
#learning_rate=0.3,
#min_split_loss=0,
#max_depth=6,
).outputs["model"]
# Predicting on the testing data
xgboost_predictions = xgboost_predict_on_CSV_op(
data=classification_testing_data,
model=xgboost_model,
# label_column needs to be set when doing prediction on a dataset that has labels
label_column_name=classification_label_column,
).outputs["predictions"]
xgboost_vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
model=xgboost_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
xgboost_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=xgboost_vertex_model_name,
).outputs["endpoint_name"]
# Scikit-learn
sklearn_model = train_logistic_regression_model_using_scikit_learn_from_CSV_op(
dataset=classification_training_data,
label_column_name=classification_label_column,
# Optional:
#penalty="l2",
#solver="lbfgs",
#max_iterations=100,
#multi_class_mode="auto",
#random_seed=0,
).outputs["model"]
sklearn_vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
model=sklearn_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=sklearn_vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_classification_model_using_all_frameworks_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,68 +0,0 @@
name: Train tabular regression linear model using Scikit learn pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_linear_model_using_Scikit_learn_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Train linear regression model using scikit learn from CSV:
componentRef:
digest: c7fe7912ab0d1fb45d201d452e9ce6be5544e7d8c6d229db7a4b931ff58560f3
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/f807e02b54d4886c65a05f40848fd51c72407f40/components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
label_column_name: tips
annotations:
editor.position: '{"x":40,"y":360,"width":180,"height":54}'
Upload Scikit learn pickle model to Google Cloud Vertex AI:
componentRef:
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train linear regression model using scikit learn from CSV
type: ScikitLearnPickleModel
annotations:
editor.position: '{"x":40,"y":490,"width":180,"height":70}'
outputValues: {}
@@ -1,57 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
train_linear_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml")
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_linear_model_using_Scikit_learn_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
all_columns = [label_column] + feature_columns
# Deploying the model might incur additional costs over time
deploy_model = False
training_data = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
training_data = select_columns_using_Pandas_on_CSV_data_op(
table=training_data,
column_names=all_columns,
).outputs["transformed_table"]
# Cleaning the NaN values.
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=training_data,
replacement_value="0",
#replacement_type_name="float",
).outputs["transformed_table"]
model = train_linear_regression_model_using_scikit_learn_from_CSV_op(
dataset=training_data,
label_column_name=label_column,
).outputs["model"]
vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_regression_linear_model_using_Scikit_learn_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,97 +0,0 @@
name: Train tabular regression model using PyTorch pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_PyTorch_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":240,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":240,"y":130,"width":180,"height":54}'
Create fully connected pytorch network:
componentRef:
digest: d03d8248fd358a0275ec33568ee7dd7dce576cc112b09dfafe2651e4d97e04a9
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
annotations:
editor.position: '{"x":40,"y":240,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":240,"y":240,"width":180,"height":54}'
Train pytorch model from csv:
componentRef:
digest: 40f3185eb61e9727f41a4e0c05dd3d3b44bd802aa0f378cfc31756560033949a
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/d8c4cf5e6403bc65bcf8d606e6baf87e2528a3dc/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Create fully connected pytorch network
type: PyTorchScriptModule
training_data:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
label_column_name: tips
annotations:
editor.position: '{"x":240,"y":380,"width":180,"height":40}'
Create PyTorch Model Archive with base handler:
componentRef:
digest: 8298b5ee1b0f0879f893add4cf352c8dec7cf9e21bb9db134c91a2d046cdb0ec
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/46d51383e6554b7f3ab4fd8cf614d8c2b422fb22/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml
arguments:
Model:
taskOutput:
outputName: trained_model
taskId: Train pytorch model from csv
type: PyTorchScriptModule
Model name: model
Model version: '1.0'
annotations:
editor.position: '{"x":240,"y":500,"width":180,"height":54}'
Upload PyTorch model archive to Google Cloud Vertex AI:
componentRef:
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model_archive:
taskOutput:
outputName: Model archive
taskId: Create PyTorch Model Archive with base handler
type: PyTorchModelArchive
annotations:
editor.position: '{"x":240,"y":630,"width":180,"height":70}'
outputValues: {}
@@ -1,85 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_model_using_PyTorch_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
all_columns = [label_column] + feature_columns
# Deploying the model might incur additional costs over time
deploy_model = False
training_data = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
training_data = select_columns_using_Pandas_on_CSV_data_op(
table=training_data,
column_names=all_columns,
).outputs["transformed_table"]
# Cleaning the NaN values.
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=training_data,
replacement_value="0",
#replacement_type_name="float",
).outputs["transformed_table"]
network = create_fully_connected_pytorch_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
# output_activation_name=None,
# output_size=1,
).outputs["model"]
model = train_pytorch_model_from_csv_op(
model=network,
training_data=training_data,
label_column_name=label_column,
# Optional:
#loss_function_name="mse_loss",
#number_of_epochs=1,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#batch_log_interval=100,
#random_seed=0,
).outputs["trained_model"]
model_archive = create_pytorch_model_archive_with_base_handler_op(
model=model,
# Optional:
# model_name="model",
# model_version="1.0",
).outputs["Model archive"]
vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
model_archive=model_archive,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_regression_model_using_PyTorch_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,116 +0,0 @@
name: Train tabular regression model using Tensorflow pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_TensorFlow_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Split rows into subsets:
componentRef:
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":170,"y":380,"width":180,"height":40}'
Create fully connected tensorflow network:
componentRef:
digest: bfcafbc5ce711b1f69cabf1338212d10d50136a73db9f9f7c984de7b80b4bfb0
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
annotations:
editor.position: '{"x":370,"y":380,"width":180,"height":54}'
Train model using Keras on CSV:
componentRef:
digest: 42ae60c889034dbad74815653e95b4f7d576b5f47f803173e8679c7b54984609
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c504a4010348c50eaaf6d4337586ccc008f4dcef/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Create fully connected tensorflow network
type: TensorflowSavedModel
label_column_name: tips
number_of_epochs: '10'
metric_names: '["mean_absolute_error"]'
annotations:
editor.position: '{"x":40,"y":500,"width":180,"height":54}'
Upload Tensorflow model to Google Cloud Vertex AI:
componentRef:
digest: 2e45263ff640b1a688e359b6936e27a81b2407749a84f340af2aa5547e0cb92c
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
annotations:
editor.position: '{"x":40,"y":630,"width":180,"height":54}'
Predict with TensorFlow model on CSV data:
componentRef:
digest: 921bb1563e93a78233b8acceab87055b9154ccf5595d056028cf0396ca224cd4
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/59c759ce6f543184e30db6817d2a703879bc0f39/components/tensorflow/Predict/on_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
label_column_name: tips
annotations:
editor.position: '{"x":240,"y":630,"width":180,"height":54}'
outputValues: {}
@@ -1,97 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_model_using_Tensorflow_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=dataset,
fraction_1=training_set_fraction,
)
training_data = split_task.outputs["split_1"]
testing_data = split_task.outputs["split_2"]
network = create_fully_connected_tensorflow_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
# output_activation_name=None,
# output_size=1,
).outputs["model"]
model = train_model_using_Keras_on_CSV_op(
training_data=training_data,
model=network,
label_column_name=label_column,
# Optional:
#loss_function_name="mean_squared_error",
number_of_epochs=10,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
metric_names=["mean_absolute_error"],
#random_seed=0,
).outputs["trained_model"]
predictions = predict_with_TensorFlow_model_on_CSV_data_op(
dataset=testing_data,
model=model,
# label_column_name needs to be set when doing prediction on a dataset that has labels
label_column_name=label_column,
# Optional:
# batch_size=1000,
).outputs["predictions"]
vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_regression_model_using_Tensorflow_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,99 +0,0 @@
name: Train tabular regression model using XGBoost pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_XGBoost_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Split rows into subsets:
componentRef:
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":170,"y":360,"width":180,"height":40}'
Train XGBoost model on CSV:
componentRef:
digest: 538c5a01eb38deaf532d619f0bbeaff4efc550fe1f0f776fc06791097b68ceac
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: tips
annotations:
editor.position: '{"x":40,"y":480,"width":180,"height":40}'
Upload XGBoost model to Google Cloud Vertex AI:
componentRef:
digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
annotations:
editor.position: '{"x":40,"y":600,"width":180,"height":54}'
Xgboost predict on CSV:
componentRef:
digest: 0876233a0c7306fefec188bd70f059b46d1fb5aa57be231799570e3bbbdd0d95
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/4694ec97baccf59284c2a1db4aa2250c22291eab/components/XGBoost/Predict/component.yaml
arguments:
data:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
label_column_name: tips
annotations:
editor.position: '{"x":240,"y":600,"width":180,"height":40}'
outputValues: {}
@@ -1,85 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_model_using_XGBoost_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=dataset,
fraction_1=training_set_fraction,
)
training_data = split_task.outputs["split_1"]
testing_data = split_task.outputs["split_2"]
model = train_XGBoost_model_on_CSV_op(
training_data=training_data,
label_column_name=label_column,
# Optional:
#starting_model=None,
#num_iterations=10,
#booster_params={},
#objective="reg:squarederror",
#booster="gbtree",
#learning_rate=0.3,
#min_split_loss=0,
#max_depth=6,
).outputs["model"]
# Predicting on the testing data
predictions = xgboost_predict_on_CSV_op(
data=testing_data,
model=model,
# label_column needs to be set when doing prediction on a dataset that has labels
label_column_name=label_column,
).outputs["predictions"]
vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_regression_model_using_XGBoost_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,238 +0,0 @@
name: Train tabular regression model using all frameworks pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_all_frameworks_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":550,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":550,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":550,"y":250,"width":180,"height":54}'
Split rows into subsets:
componentRef:
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":550,"y":360,"width":180,"height":40}'
Create fully connected pytorch network:
componentRef:
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arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
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Create fully connected tensorflow network:
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arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
annotations:
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Train model using Keras on CSV:
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arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Create fully connected tensorflow network
type: TensorflowSavedModel
label_column_name: tips
number_of_epochs: '10'
metric_names: '["mean_absolute_error"]'
annotations:
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Train pytorch model from csv:
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arguments:
model:
taskOutput:
outputName: model
taskId: Create fully connected pytorch network
type: PyTorchScriptModule
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: tips
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Train XGBoost model on CSV:
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arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: tips
annotations:
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Train linear regression model using scikit learn from CSV:
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arguments:
dataset:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: tips
annotations:
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Predict with TensorFlow model on CSV data:
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arguments:
dataset:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
label_column_name: tips
annotations:
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Create PyTorch Model Archive with base handler:
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arguments:
Model:
taskOutput:
outputName: trained_model
taskId: Train pytorch model from csv
type: PyTorchScriptModule
Model name: model
Model version: '1.0'
annotations:
editor.position: '{"x":380,"y":750,"width":180,"height":54}'
Xgboost predict on CSV:
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arguments:
data:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
label_column_name: tips
annotations:
editor.position: '{"x":810,"y":750,"width":180,"height":40}'
Upload Scikit learn pickle model to Google Cloud Vertex AI:
componentRef:
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arguments:
model:
taskOutput:
outputName: model
taskId: Train linear regression model using scikit learn from CSV
type: ScikitLearnPickleModel
annotations:
editor.position: '{"x":1030,"y":750,"width":180,"height":70}'
Upload Tensorflow model to Google Cloud Vertex AI:
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arguments:
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
annotations:
editor.position: '{"x":40,"y":880,"width":180,"height":54}'
Upload PyTorch model archive to Google Cloud Vertex AI:
componentRef:
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arguments:
model_archive:
taskOutput:
outputName: Model archive
taskId: Create PyTorch Model Archive with base handler
type: PyTorchModelArchive
annotations:
editor.position: '{"x":380,"y":880,"width":180,"height":70}'
Upload XGBoost model to Google Cloud Vertex AI:
componentRef:
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arguments:
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
annotations:
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outputValues: {}
@@ -1,208 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
# TensorFlow
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
# PyTorch
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
# XGBoost
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
# Scikit-learn
train_linear_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml")
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
# Vertex AI
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_model_using_all_frameworks_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=dataset,
fraction_1=training_set_fraction,
)
training_data = split_task.outputs["split_1"]
testing_data = split_task.outputs["split_2"]
# TensorFlow
tensorflow_network = create_fully_connected_tensorflow_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
# output_activation_name=None,
# output_size=1,
).outputs["model"]
tensorflow_model = train_model_using_Keras_on_CSV_op(
training_data=training_data,
model=tensorflow_network,
label_column_name=label_column,
# Optional:
#loss_function_name="mean_squared_error",
number_of_epochs=10,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
metric_names=["mean_absolute_error"],
#random_seed=0,
).outputs["trained_model"]
tensorflow_predictions = predict_with_TensorFlow_model_on_CSV_data_op(
dataset=testing_data,
model=tensorflow_model,
# label_column_name needs to be set when doing prediction on a dataset that has labels
label_column_name=label_column,
# Optional:
# batch_size=1000,
).outputs["predictions"]
tensorflow_vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
model=tensorflow_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
tensorflow_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=tensorflow_vertex_model_name,
).outputs["endpoint_name"]
# PyTorch
pytorch_network = create_fully_connected_pytorch_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
# output_activation_name=None,
# output_size=1,
).outputs["model"]
pytorch_model = train_pytorch_model_from_csv_op(
model=pytorch_network,
training_data=training_data,
label_column_name=label_column,
# Optional:
#loss_function_name="mse_loss",
#number_of_epochs=1,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#batch_log_interval=100,
#random_seed=0,
).outputs["trained_model"]
pytorch_model_archive = create_pytorch_model_archive_with_base_handler_op(
model=pytorch_model,
# Optional:
# model_name="model",
# model_version="1.0",
).outputs["Model archive"]
pytorch_vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
model_archive=pytorch_model_archive,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
pytorch_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=pytorch_vertex_model_name,
).outputs["endpoint_name"]
# XGBoost
xgboost_model = train_XGBoost_model_on_CSV_op(
training_data=training_data,
label_column_name=label_column,
# Optional:
#starting_model=None,
#num_iterations=10,
#booster_params={},
#objective="reg:squarederror",
#booster="gbtree",
#learning_rate=0.3,
#min_split_loss=0,
#max_depth=6,
).outputs["model"]
# Predicting on the testing data
xgboost_predictions = xgboost_predict_on_CSV_op(
data=testing_data,
model=xgboost_model,
# label_column needs to be set when doing prediction on a dataset that has labels
label_column_name=label_column,
).outputs["predictions"]
xgboost_vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
model=xgboost_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
xgboost_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=xgboost_vertex_model_name,
).outputs["endpoint_name"]
# Scikit-learn
sklearn_model = train_linear_regression_model_using_scikit_learn_from_CSV_op(
dataset=training_data,
label_column_name=label_column,
).outputs["model"]
sklearn_vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
model=sklearn_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=sklearn_vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_regression_model_using_all_frameworks_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -2,5 +2,4 @@ cpr_model_server.py
entrypoint.py
state_dict.pth
config.json
**/__pycache__
!testdata/**
**/__pycache__
@@ -2,7 +2,7 @@
## About CPR
CPR ([custom prediction routines](https://github.com/googleapis/python-aiplatform/blob/main/google/cloud/aiplatform/prediction/README.md)) is a framework designed by Google Cloud developers to make it easier to combine machine learning models with custom preprocessing and postprocessing logic in a real-time serving application.
CPR ([custom prediction routines](https://github.com/googleapis/python-aiplatform/blob/custom-prediction-routine/google/cloud/aiplatform/prediction/README.md)) is a framework designed by Google Cloud developers to make it easier to combine machine learning models with custom preprocessing and postprocessing logic in a real-time serving application.
## Using this example
@@ -34,23 +34,6 @@ Finally, install the Python modules required to build and run the model server:
pip install -r requirements.txt
```
### Auth
This example uses Google Cloud Storage for hosting model artifacts and Artifact Registry to store the container image.
You'll need to authorize yourself before you can interact with these.
First, log in to GCP with application default credentials:
```sh
gcloud auth application-default login
```
Next, if you haven't done so already, set up the [gcloud credential helper](https://cloud.google.com/artifact-registry/docs/docker/authentication)
for the Artifact Registry region where you intend to host the image.
```
gcloud auth configure-docker <region>-docker.pkg.dev
```
### Predictor
The `TimmPredictor` class in `timm_serving/predictor.py` implements most of the important logic for the server.
@@ -60,9 +60,9 @@ class CPRConfig(object):
image: str = "timm_predictor:latest"
artifact_local_dir: str = ""
region: str = "us-central1"
project_id: str = "<your project ID here>"
project_id: str = "samthrasher-experimental"
repository: str = "cpr-images"
artifact_gcs_dir: str = "gs://<your bucket ID here>/timm-vit224/"
artifact_gcs_dir: str = "gs://samthrasher-cpr-example/timm-vit224/"
model_name: str = ""
endpoint_name: str = ""
machine_type: str = "n1-standard-2"
@@ -5,4 +5,4 @@ timm==0.5.4
smart_open==6.0.0
google-cloud-storage>=1.26.0,<2.0.0dev
google-cloud-aiplatform[prediction]>=1.16.0
google-cloud-aiplatform[prediction] @ git+https://github.com/googleapis/python-aiplatform.git@custom-prediction-routine
@@ -70,10 +70,7 @@ class PredictorUnitTests(absltest.TestCase):
def setUp(self):
super().setUp()
self.config = CPRConfig()
try:
self.config.load()
except FileNotFoundError:
logging.info("No saved config file found, using default values.")
self.config.load()
self.predictor = predictor.TimmPredictor()
def test_load_from_saved_state_dict_ok(self):
@@ -173,10 +170,7 @@ class ServerEndToEndTests(absltest.TestCase):
def setUp(self):
super().setUp()
self.config = CPRConfig()
try:
self.config.load()
except FileNotFoundError:
logging.info("No saved config file found, using default values.")
self.config.load()
self.local_model = cpr.LocalModel(
serving_container_spec=aiplatform.gapic.ModelContainerSpec(
image_uri=self.config.image
@@ -1 +0,0 @@
blah
@@ -1,64 +0,0 @@
name: Train linear regression model using scikit learn from CSV
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml'}
inputs:
- {name: dataset, type: CSV}
- {name: label_column_name, type: String}
outputs:
- {name: model, type: ScikitLearnPickleModel}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'scikit-learn==1.0.2' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'scikit-learn==1.0.2' 'pandas==1.4.3'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_linear_regression_model_using_scikit_learn_from_CSV(
dataset_path,
model_path,
label_column_name,
):
import pandas
import pickle
from sklearn import linear_model
df = pandas.read_csv(dataset_path)
model = linear_model.LinearRegression()
model.fit(
X=df.drop(columns=label_column_name),
y=df[label_column_name],
)
with open(model_path, "wb") as f:
pickle.dump(model, f)
import argparse
_parser = argparse.ArgumentParser(prog='Train linear regression model using scikit learn from CSV', description='')
_parser.add_argument("--dataset", dest="dataset_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = train_linear_regression_model_using_scikit_learn_from_CSV(**_parsed_args)
args:
- --dataset
- {inputPath: dataset}
- --label-column-name
- {inputValue: label_column_name}
- --model
- {outputPath: model}
@@ -1,163 +0,0 @@
name: Train logistic regression model using scikit learn from CSV
description: Train logistic regression model using Scikit-learn
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml'}
inputs:
- {name: dataset, type: CSV}
- {name: label_column_name, type: String}
- {name: penalty, type: String, default: l2, optional: true}
- {name: solver, type: String, default: lbfgs, optional: true}
- {name: max_iterations, type: Integer, default: '100', optional: true}
- {name: multi_class_mode, type: String, default: auto, optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: model, type: ScikitLearnPickleModel}
- {name: model_parameters, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'scikit-learn==1.0.2' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'scikit-learn==1.0.2' 'pandas==1.4.3'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_logistic_regression_model_using_scikit_learn_from_CSV(
dataset_path,
model_path,
label_column_name,
penalty = "l2", # l1, l2, elasticnet, none
solver = "lbfgs", # newton-cg, lbfgs, liblinear, sag, saga
max_iterations = 100,
multi_class_mode = "auto", # auto, ovr, multinomial
random_seed = 0,
):
"""Train logistic regression model using Scikit-learn
See https://scikit-learn.org/stable/modules/generated/sklearn.linear_model.LogisticRegression.html
"""
import json
import pandas
import pickle
from sklearn import linear_model
df = pandas.read_csv(dataset_path)
model = linear_model.LogisticRegression(
penalty=penalty,
#dual=False,
#tol=1e-4,
#C=1.0,
#fit_intercept=True,
#intercept_scaling=1,
#class_weight=None,
random_state=random_seed,
solver=solver,
max_iter=max_iterations,
multi_class=multi_class_mode,
#l1_ratio=None,
verbose=1,
)
model_parameters = model.get_params()
model_parameters_json = json.dumps(model_parameters, indent=2)
print("Model parameters:")
print(model_parameters_json)
print()
model.fit(
X=df.drop(columns=label_column_name),
y=df[label_column_name],
)
with open(model_path, "wb") as f:
pickle.dump(model, f)
return (model_parameters_json,)
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
import argparse
_parser = argparse.ArgumentParser(prog='Train logistic regression model using scikit learn from CSV', description='Train logistic regression model using Scikit-learn')
_parser.add_argument("--dataset", dest="dataset_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--penalty", dest="penalty", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--solver", dest="solver", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--max-iterations", dest="max_iterations", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--multi-class-mode", dest="multi_class_mode", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=1)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = train_logistic_regression_model_using_scikit_learn_from_CSV(**_parsed_args)
_output_serializers = [
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --dataset
- {inputPath: dataset}
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: penalty}
then:
- --penalty
- {inputValue: penalty}
- if:
cond: {isPresent: solver}
then:
- --solver
- {inputValue: solver}
- if:
cond: {isPresent: max_iterations}
then:
- --max-iterations
- {inputValue: max_iterations}
- if:
cond: {isPresent: multi_class_mode}
then:
- --multi-class-mode
- {inputValue: multi_class_mode}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --model
- {outputPath: model}
- '----output-paths'
- {outputPath: model_parameters}
@@ -1,41 +0,0 @@
name: Create PyTorch Model Archive with base handler
inputs:
- {name: Model, type: PyTorchScriptModule}
- {name: Model name, type: String, default: model}
- {name: Model version, type: String, default: "1.0"}
outputs:
- {name: Model archive, type: PyTorchModelArchive}
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml'
implementation:
container:
image: pytorch/torchserve:0.6.0-cpu
command:
- bash
- -exc
- |
model_path=$0
model_name=$1
model_version=$2
output_model_archive_path=$3
mkdir -p "$(dirname "$output_model_archive_path")"
# TODO: Use the built-in base_handler once my fix is merged: https://github.com/pytorch/serve/pull/1682
echo '
from ts.torch_handler import base_handler
class BaseHandler(base_handler.BaseHandler):
pass
' > base_handler.py # torch-model-archiver needs the handler to have .py extension
torch-model-archiver --model-name "$model_name" --version "$model_version" --serialized-file "$model_path" --handler base_handler.py
# torch-model-archiver does not allow specifying the output path, but always writes to "${model_name}.<format>"
expected_model_archive_path="${model_name}.mar"
mv "$expected_model_archive_path" "$output_model_archive_path"
- {inputPath: Model}
- {inputValue: Model name}
- {inputValue: Model version}
- {outputPath: Model archive}
@@ -1,117 +0,0 @@
name: Create fully connected pytorch network
description: Creates fully-connected network in PyTorch ScriptModule format
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/PyTorch/Create_fully_connected_network/component.yaml'}
inputs:
- {name: input_size, type: Integer}
- {name: hidden_layer_sizes, type: JsonArray, default: '[]', optional: true}
- {name: output_size, type: Integer, default: '1', optional: true}
- {name: activation_name, type: String, default: relu, optional: true}
- {name: output_activation_name, type: String, optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: model, type: PyTorchScriptModule}
implementation:
container:
image: pytorch/pytorch:1.7.1-cuda11.0-cudnn8-runtime
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def create_fully_connected_pytorch_network(
input_size,
model_path,
hidden_layer_sizes = [],
output_size = 1,
activation_name = 'relu',
output_activation_name = None,
random_seed = 0,
):
'''Creates fully-connected network in PyTorch ScriptModule format'''
import torch
torch.manual_seed(random_seed)
activation = getattr(torch, activation_name, None) or getattr(torch.nn.functional, activation_name, None)
if not activation:
raise ValueError(f'Activation "{activation_name}" was not found.')
class ActivationLayer(torch.nn.Module):
def forward(self, input):
return activation(input)
layers = []
prev_layer_size = input_size
for layer_size in hidden_layer_sizes:
layer = torch.nn.Linear(prev_layer_size, layer_size)
prev_layer_size = layer_size
layers.append(layer)
layers.append(ActivationLayer())
# Adding the output layer
layers.append(torch.nn.Linear(prev_layer_size, output_size))
# Adding the optional activation after the output layer
if output_activation_name:
output_activation = getattr(torch, output_activation_name, None) or getattr(torch.nn.functional, output_activation_name, None)
class OutputActivationLayer(torch.nn.Module):
def forward(self, input):
return output_activation(input)
layers.append(OutputActivationLayer())
network = torch.nn.Sequential(*layers)
script_module = torch.jit.script(network)
print(script_module)
script_module.save(model_path)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Create fully connected pytorch network', description='Creates fully-connected network in PyTorch ScriptModule format')
_parser.add_argument("--input-size", dest="input_size", type=int, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--hidden-layer-sizes", dest="hidden_layer_sizes", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--output-size", dest="output_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--activation-name", dest="activation_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--output-activation-name", dest="output_activation_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = create_fully_connected_pytorch_network(**_parsed_args)
args:
- --input-size
- {inputValue: input_size}
- if:
cond: {isPresent: hidden_layer_sizes}
then:
- --hidden-layer-sizes
- {inputValue: hidden_layer_sizes}
- if:
cond: {isPresent: output_size}
then:
- --output-size
- {inputValue: output_size}
- if:
cond: {isPresent: activation_name}
then:
- --activation-name
- {inputValue: activation_name}
- if:
cond: {isPresent: output_activation_name}
then:
- --output-activation-name
- {inputValue: output_activation_name}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --model
- {outputPath: model}
@@ -1,209 +0,0 @@
name: Train pytorch model from csv
description: Trains PyTorch model
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml'
inputs:
- {name: model, type: PyTorchScriptModule}
- {name: training_data, type: CSV}
- {name: label_column_name, type: String}
- {name: loss_function_name, type: String, default: mse_loss, optional: true}
- {name: number_of_epochs, type: Integer, default: '1', optional: true}
- {name: learning_rate, type: Float, default: '0.1', optional: true}
- {name: optimizer_name, type: String, default: Adadelta, optional: true}
- {name: optimizer_parameters, type: JsonObject, optional: true}
- {name: batch_size, type: Integer, default: '32', optional: true}
- {name: batch_log_interval, type: Integer, default: '100', optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: trained_model, type: PyTorchScriptModule}
implementation:
container:
image: pytorch/pytorch:1.7.1-cuda11.0-cudnn8-runtime
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
--no-warn-script-location 'pandas==1.4.3' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_pytorch_model_from_csv(
model_path,
training_data_path,
trained_model_path,
label_column_name,
loss_function_name = 'mse_loss',
number_of_epochs = 1,
learning_rate = 0.1,
optimizer_name = 'Adadelta',
optimizer_parameters = None,
batch_size = 32,
batch_log_interval = 100,
random_seed = 0,
):
'''Trains PyTorch model'''
import pandas
import torch
torch.manual_seed(random_seed)
use_cuda = torch.cuda.is_available()
device = torch.device("cuda" if use_cuda else "cpu")
model = torch.jit.load(model_path)
model.to(device)
model.train()
optimizer_class = getattr(torch.optim, optimizer_name, None)
if not optimizer_class:
raise ValueError(f'Optimizer "{optimizer_name}" was not found.')
optimizer_parameters = optimizer_parameters or {}
optimizer_parameters['lr'] = learning_rate
optimizer = optimizer_class(model.parameters(), **optimizer_parameters)
loss_function = getattr(torch, loss_function_name, None) or getattr(torch.nn, loss_function_name, None) or getattr(torch.nn.functional, loss_function_name, None)
if not loss_function:
raise ValueError(f'Loss function "{loss_function_name}" was not found.')
class CsvDataset(torch.utils.data.Dataset):
def __init__(self, file_path, label_column_name, drop_nan_columns_or_rows = 'columns'):
dataframe = pandas.read_csv(file_path).convert_dtypes()
# Preventing error: default_collate: batch must contain tensors, numpy arrays, numbers, dicts or lists; found object
if drop_nan_columns_or_rows == 'columns':
non_nan_data = dataframe.dropna(axis='columns')
removed_columns = set(dataframe.columns) - set(non_nan_data.columns)
if removed_columns:
print('Skipping columns with NaNs: ' + str(removed_columns))
dataframe = non_nan_data
if drop_nan_columns_or_rows == 'rows':
non_nan_data = dataframe.dropna(axis='index')
number_of_removed_rows = len(dataframe) - len(non_nan_data)
if number_of_removed_rows:
print(f'Skipped {number_of_removed_rows} rows with NaNs.')
dataframe = non_nan_data
numerical_data = dataframe.select_dtypes(include='number')
non_numerical_data = dataframe.select_dtypes(exclude='number')
if not non_numerical_data.empty:
print('Skipping non-number columns:')
print(non_numerical_data.dtypes)
self._dataframe = dataframe
self.labels = numerical_data[[label_column_name]]
self.features = numerical_data.drop(columns=[label_column_name])
def __len__(self):
return len(self._dataframe)
def __getitem__(self, index):
return [self.features.loc[index].to_numpy(dtype='float32'), self.labels.loc[index].to_numpy(dtype='float32')]
dataset = CsvDataset(
file_path=training_data_path,
label_column_name=label_column_name,
)
train_loader = torch.utils.data.DataLoader(
dataset=dataset,
batch_size=batch_size,
shuffle=True,
)
last_full_batch_loss = None
for epoch in range(1, number_of_epochs + 1):
for batch_idx, (data, target) in enumerate(train_loader):
data, target = data.to(device), target.to(device)
optimizer.zero_grad()
output = model(data)
loss = loss_function(output, target)
loss.backward()
optimizer.step()
if len(data) == batch_size:
last_full_batch_loss = loss.item()
if batch_idx % batch_log_interval == 0:
print('Train Epoch: {} [{}/{} ({:.0f}%)]\tLoss: {:.6f}'.format(
epoch, batch_idx * len(data), len(train_loader.dataset),
100. * batch_idx / len(train_loader), loss.item()))
print(f'Training epoch {epoch} completed. Last full batch loss: {last_full_batch_loss:.6f}')
# print(optimizer.state_dict())
model.save(trained_model_path)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Train pytorch model from csv', description='Trains PyTorch model')
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--training-data", dest="training_data_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--loss-function-name", dest="loss_function_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--number-of-epochs", dest="number_of_epochs", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--learning-rate", dest="learning_rate", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--optimizer-name", dest="optimizer_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--optimizer-parameters", dest="optimizer_parameters", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--batch-size", dest="batch_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--batch-log-interval", dest="batch_log_interval", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--trained-model", dest="trained_model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = train_pytorch_model_from_csv(**_parsed_args)
args:
- --model
- {inputPath: model}
- --training-data
- {inputPath: training_data}
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: loss_function_name}
then:
- --loss-function-name
- {inputValue: loss_function_name}
- if:
cond: {isPresent: number_of_epochs}
then:
- --number-of-epochs
- {inputValue: number_of_epochs}
- if:
cond: {isPresent: learning_rate}
then:
- --learning-rate
- {inputValue: learning_rate}
- if:
cond: {isPresent: optimizer_name}
then:
- --optimizer-name
- {inputValue: optimizer_name}
- if:
cond: {isPresent: optimizer_parameters}
then:
- --optimizer-parameters
- {inputValue: optimizer_parameters}
- if:
cond: {isPresent: batch_size}
then:
- --batch-size
- {inputValue: batch_size}
- if:
cond: {isPresent: batch_log_interval}
then:
- --batch-log-interval
- {inputValue: batch_log_interval}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --trained-model
- {outputPath: trained_model}
@@ -1,110 +0,0 @@
name: Xgboost predict on CSV
description: Makes predictions using a trained XGBoost model.
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/XGBoost/Predict/component.yaml'}
inputs:
- {name: data, type: CSV, description: Feature data in Apache Parquet format.}
- {name: model, type: XGBoostModel, description: Trained model in binary XGBoost format.}
- {name: label_column_name, type: String, description: Optional. Name of the column
containing the label data that is excluded during the prediction., optional: true}
outputs:
- {name: predictions, description: Model predictions.}
implementation:
container:
image: python:3.10
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'xgboost==1.6.1' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'xgboost==1.6.1' 'pandas==1.4.3'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def xgboost_predict_on_CSV(
data_path,
model_path,
predictions_path,
label_column_name = None,
):
"""Makes predictions using a trained XGBoost model.
Args:
data_path: Feature data in Apache Parquet format.
model_path: Trained model in binary XGBoost format.
predictions_path: Model predictions.
label_column_name: Optional. Name of the column containing the label data that is excluded during the prediction.
Annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
"""
from pathlib import Path
import numpy
import pandas
import xgboost
df = pandas.read_csv(
data_path,
).convert_dtypes()
print("Evaluation data information:")
df.info(verbose=True)
# Converting column types that XGBoost does not support
for column_name, dtype in df.dtypes.items():
if dtype in ["string", "object"]:
print(f"Treating the {dtype.name} column '{column_name}' as categorical.")
df[column_name] = df[column_name].astype("category")
print(f"Inferred {len(df[column_name].cat.categories)} categories for the '{column_name}' column.")
# Working around the XGBoost issue with nullable floats: https://github.com/dmlc/xgboost/issues/8213
if pandas.api.types.is_float_dtype(dtype):
# Converting from "Float64" to "float64"
df[column_name] = df[column_name].astype(dtype.name.lower())
print("Final evaluation data information:")
df.info(verbose=True)
if label_column_name is not None:
df = df.drop(columns=[label_column_name])
testing_data = xgboost.DMatrix(
data=df,
enable_categorical=True,
)
model = xgboost.Booster(model_file=model_path)
predictions = model.predict(testing_data)
Path(predictions_path).parent.mkdir(parents=True, exist_ok=True)
numpy.savetxt(predictions_path, predictions)
import argparse
_parser = argparse.ArgumentParser(prog='Xgboost predict on CSV', description='Makes predictions using a trained XGBoost model.')
_parser.add_argument("--data", dest="data_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--predictions", dest="predictions_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = xgboost_predict_on_CSV(**_parsed_args)
args:
- --data
- {inputPath: data}
- --model
- {inputPath: model}
- if:
cond: {isPresent: label_column_name}
then:
- --label-column-name
- {inputValue: label_column_name}
- --predictions
- {outputPath: predictions}
@@ -1,241 +0,0 @@
name: Train XGBoost model on CSV
description: Trains an XGBoost model.
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/XGBoost/Train/component.yaml'}
inputs:
- {name: training_data, type: CSV, description: Training data in CSV format.}
- {name: label_column_name, type: String, description: Name of the column containing
the label data.}
- {name: starting_model, type: XGBoostModel, description: Existing trained model to
start from (in the binary XGBoost format)., optional: true}
- {name: num_iterations, type: Integer, description: Number of boosting iterations.,
default: '10', optional: true}
- name: objective
type: String
description: |-
The learning task and the corresponding learning objective.
See https://xgboost.readthedocs.io/en/latest/parameter.html#learning-task-parameters
The most common values are:
"reg:squarederror" - Regression with squared loss (default).
"reg:logistic" - Logistic regression.
"binary:logistic" - Logistic regression for binary classification, output probability.
"binary:logitraw" - Logistic regression for binary classification, output score before logistic transformation
"rank:pairwise" - Use LambdaMART to perform pairwise ranking where the pairwise loss is minimized
"rank:ndcg" - Use LambdaMART to perform list-wise ranking where Normalized Discounted Cumulative Gain (NDCG) is maximized
default: reg:squarederror
optional: true
- {name: booster, type: String, description: 'The booster to use. Can be `gbtree`,
`gblinear` or `dart`; `gbtree` and `dart` use tree based models while `gblinear`
uses linear functions.', default: gbtree, optional: true}
- {name: learning_rate, type: Float, description: 'Step size shrinkage used in update
to prevents overfitting. Range: [0,1].', default: '0.3', optional: true}
- name: min_split_loss
type: Float
description: |-
Minimum loss reduction required to make a further partition on a leaf node of the tree.
The larger `min_split_loss` is, the more conservative the algorithm will be. Range: [0,Inf].
default: '0'
optional: true
- name: max_depth
type: Integer
description: |-
Maximum depth of a tree. Increasing this value will make the model more complex and more likely to overfit.
0 indicates no limit on depth. Range: [0,Inf].
default: '6'
optional: true
- {name: booster_params, type: JsonObject, description: 'Parameters for the booster.
See https://xgboost.readthedocs.io/en/latest/parameter.html', optional: true}
outputs:
- {name: model, type: XGBoostModel, description: Trained model in the binary XGBoost
format.}
- {name: model_config, type: XGBoostModelConfig, description: The internal parameter
configuration of Booster as a JSON string.}
implementation:
container:
image: python:3.10
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'xgboost==1.6.1' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'xgboost==1.6.1' 'pandas==1.4.3'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_XGBoost_model_on_CSV(
training_data_path,
model_path,
model_config_path,
label_column_name,
starting_model_path = None,
num_iterations = 10,
# Booster parameters
objective = "reg:squarederror",
booster = "gbtree",
learning_rate = 0.3,
min_split_loss = 0,
max_depth = 6,
booster_params = None,
):
"""Trains an XGBoost model.
Args:
training_data_path: Training data in CSV format.
model_path: Trained model in the binary XGBoost format.
model_config_path: The internal parameter configuration of Booster as a JSON string.
starting_model_path: Existing trained model to start from (in the binary XGBoost format).
label_column_name: Name of the column containing the label data.
num_iterations: Number of boosting iterations.
booster_params: Parameters for the booster. See https://xgboost.readthedocs.io/en/latest/parameter.html
objective: The learning task and the corresponding learning objective.
See https://xgboost.readthedocs.io/en/latest/parameter.html#learning-task-parameters
The most common values are:
"reg:squarederror" - Regression with squared loss (default).
"reg:logistic" - Logistic regression.
"binary:logistic" - Logistic regression for binary classification, output probability.
"binary:logitraw" - Logistic regression for binary classification, output score before logistic transformation
"rank:pairwise" - Use LambdaMART to perform pairwise ranking where the pairwise loss is minimized
"rank:ndcg" - Use LambdaMART to perform list-wise ranking where Normalized Discounted Cumulative Gain (NDCG) is maximized
booster: The booster to use. Can be `gbtree`, `gblinear` or `dart`; `gbtree` and `dart` use tree based models while `gblinear` uses linear functions.
learning_rate: Step size shrinkage used in update to prevents overfitting. Range: [0,1].
min_split_loss: Minimum loss reduction required to make a further partition on a leaf node of the tree.
The larger `min_split_loss` is, the more conservative the algorithm will be. Range: [0,Inf].
max_depth: Maximum depth of a tree. Increasing this value will make the model more complex and more likely to overfit.
0 indicates no limit on depth. Range: [0,Inf].
Annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
"""
import pandas
import xgboost
df = pandas.read_csv(
training_data_path,
).convert_dtypes()
print("Training data information:")
df.info(verbose=True)
# Converting column types that XGBoost does not support
for column_name, dtype in df.dtypes.items():
if dtype in ["string", "object"]:
print(f"Treating the {dtype.name} column '{column_name}' as categorical.")
df[column_name] = df[column_name].astype("category")
print(f"Inferred {len(df[column_name].cat.categories)} categories for the '{column_name}' column.")
# Working around the XGBoost issue with nullable floats: https://github.com/dmlc/xgboost/issues/8213
if pandas.api.types.is_float_dtype(dtype):
# Converting from "Float64" to "float64"
df[column_name] = df[column_name].astype(dtype.name.lower())
print()
print("Final training data information:")
df.info(verbose=True)
training_data = xgboost.DMatrix(
data=df.drop(columns=[label_column_name]),
label=df[[label_column_name]],
enable_categorical=True,
)
booster_params = booster_params or {}
booster_params.setdefault("objective", objective)
booster_params.setdefault("booster", booster)
booster_params.setdefault("learning_rate", learning_rate)
booster_params.setdefault("min_split_loss", min_split_loss)
booster_params.setdefault("max_depth", max_depth)
starting_model = None
if starting_model_path:
starting_model = xgboost.Booster(model_file=starting_model_path)
print()
print("Training the model:")
model = xgboost.train(
params=booster_params,
dtrain=training_data,
num_boost_round=num_iterations,
xgb_model=starting_model,
evals=[(training_data, "training_data")],
)
# Saving the model in binary format
model.save_model(model_path)
model_config_str = model.save_config()
with open(model_config_path, "w") as model_config_file:
model_config_file.write(model_config_str)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Train XGBoost model on CSV', description='Trains an XGBoost model.')
_parser.add_argument("--training-data", dest="training_data_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--starting-model", dest="starting_model_path", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--num-iterations", dest="num_iterations", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--objective", dest="objective", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--booster", dest="booster", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--learning-rate", dest="learning_rate", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--min-split-loss", dest="min_split_loss", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--max-depth", dest="max_depth", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--booster-params", dest="booster_params", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model-config", dest="model_config_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = train_XGBoost_model_on_CSV(**_parsed_args)
args:
- --training-data
- {inputPath: training_data}
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: starting_model}
then:
- --starting-model
- {inputPath: starting_model}
- if:
cond: {isPresent: num_iterations}
then:
- --num-iterations
- {inputValue: num_iterations}
- if:
cond: {isPresent: objective}
then:
- --objective
- {inputValue: objective}
- if:
cond: {isPresent: booster}
then:
- --booster
- {inputValue: booster}
- if:
cond: {isPresent: learning_rate}
then:
- --learning-rate
- {inputValue: learning_rate}
- if:
cond: {isPresent: min_split_loss}
then:
- --min-split-loss
- {inputValue: min_split_loss}
- if:
cond: {isPresent: max_depth}
then:
- --max-depth
- {inputValue: max_depth}
- if:
cond: {isPresent: booster_params}
then:
- --booster-params
- {inputValue: booster_params}
- --model
- {outputPath: model}
- --model-config
- {outputPath: model_config}
@@ -1,204 +0,0 @@
name: Split rows into subsets
description: Splits the data table according to the split fractions.
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml'}
inputs:
- {name: table, type: CSV}
- {name: fraction_1, type: Float, description: 'The proportion of the lines to put
into the 1st split. Range: [0, 1]'}
- name: fraction_2
type: Float
description: |-
The proportion of the lines to put into the 2nd split. Range: [0, 1]
If fraction_2 is not specified, then fraction_2 = 1 - fraction_1.
The remaining lines go to the 3rd split (if any).
optional: true
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: split_1, type: CSV}
- {name: split_2, type: CSV}
- {name: split_3, type: CSV}
- {name: split_1_count, type: Integer}
- {name: split_2_count, type: Integer}
- {name: split_3_count, type: Integer}
implementation:
container:
image: python:3.9
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def split_rows_into_subsets(
table_path,
split_1_path,
split_2_path,
split_3_path,
fraction_1,
fraction_2 = None,
random_seed = 0,
):
"""Splits the data table according to the split fractions.
Args:
fraction_1: The proportion of the lines to put into the 1st split. Range: [0, 1]
fraction_2: The proportion of the lines to put into the 2nd split. Range: [0, 1]
If fraction_2 is not specified, then fraction_2 = 1 - fraction_1.
The remaining lines go to the 3rd split (if any).
"""
import random
random.seed(random_seed)
SHUFFLE_BUFFER_SIZE = 10000
num_splits = 3
if fraction_1 < 0 or fraction_1 > 1:
raise ValueError("fraction_1 must be in between 0 and 1.")
if fraction_2 is None:
fraction_2 = 1 - fraction_1
if fraction_2 < 0 or fraction_2 > 1:
raise ValueError("fraction_2 must be in between 0 and 1.")
fraction_3 = 1 - fraction_1 - fraction_2
fractions = [
fraction_1,
fraction_2,
fraction_3,
]
assert sum(fractions) == 1
written_line_counts = [0] * num_splits
output_files = [
open(split_1_path, "wb"),
open(split_2_path, "wb"),
open(split_3_path, "wb"),
]
with open(table_path, "rb") as input_file:
# Writing the headers
header_line = input_file.readline()
for output_file in output_files:
output_file.write(header_line)
while True:
line_buffer = []
for i in range(SHUFFLE_BUFFER_SIZE):
line = input_file.readline()
if not line:
break
line_buffer.append(line)
# We need to exactly partition the lines between the output files
# To overcome possible systematic bias, we could calculate the total numbers
# of lines written to each file and take that into account.
num_read_lines = len(line_buffer)
number_of_lines_for_files = [0] * num_splits
# List that will have the index of the destination file for each line
file_index_for_line = []
remaining_lines = num_read_lines
remaining_fraction = 1
for i in range(num_splits):
number_of_lines_for_file = (
round(remaining_lines * (fractions[i] / remaining_fraction))
if remaining_fraction > 0
else 0
)
number_of_lines_for_files[i] = number_of_lines_for_file
remaining_lines -= number_of_lines_for_file
remaining_fraction -= fractions[i]
file_index_for_line.extend([i] * number_of_lines_for_file)
assert remaining_lines == 0, f"{remaining_lines}"
assert len(file_index_for_line) == num_read_lines
random.shuffle(file_index_for_line)
for i in range(num_read_lines):
output_files[file_index_for_line[i]].write(line_buffer[i])
written_line_counts[file_index_for_line[i]] += 1
# Exit if the file ended before we were able to fully fill the buffer
if len(line_buffer) != SHUFFLE_BUFFER_SIZE:
break
for output_file in output_files:
output_file.close()
return written_line_counts
def _serialize_int(int_value: int) -> str:
if isinstance(int_value, str):
return int_value
if not isinstance(int_value, int):
raise TypeError('Value "{}" has type "{}" instead of int.'.format(str(int_value), str(type(int_value))))
return str(int_value)
import argparse
_parser = argparse.ArgumentParser(prog='Split rows into subsets', description='Splits the data table according to the split fractions.')
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--fraction-1", dest="fraction_1", type=float, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--fraction-2", dest="fraction_2", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--split-1", dest="split_1_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--split-2", dest="split_2_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--split-3", dest="split_3_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=3)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = split_rows_into_subsets(**_parsed_args)
_output_serializers = [
_serialize_int,
_serialize_int,
_serialize_int,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --table
- {inputPath: table}
- --fraction-1
- {inputValue: fraction_1}
- if:
cond: {isPresent: fraction_2}
then:
- --fraction-2
- {inputValue: fraction_2}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --split-1
- {outputPath: split_1}
- --split-2
- {outputPath: split_2}
- --split-3
- {outputPath: split_3}
- '----output-paths'
- {outputPath: split_1_count}
- {outputPath: split_2_count}
- {outputPath: split_3_count}
@@ -1,241 +0,0 @@
name: Deploy model to endpoint for Google Cloud Vertex AI Model
description: Deploys Google Cloud Vertex AI Model to a Google Cloud Vertex AI Endpoint.
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model_name, type: String, description: Full resource name of a Google Cloud
Vertex AI Model}
- name: endpoint_name
type: String
description: |-
Optional. Full name of Google Cloud Vertex Endpoint. A new
endpoint is created if the name is not passed.
optional: true
- name: machine_type
type: String
description: |-
The type of the machine. See the [list of machine types
supported for prediction
](https://cloud.google.com/vertex-ai/docs/predictions/configure-compute#machine-types).
Defaults to "n1-standard-2"
default: n1-standard-2
optional: true
- name: min_replica_count
type: Integer
description: |-
Optional. The minimum number of machine replicas this deployed
model will be always deployed on. If traffic against it increases,
it may dynamically be deployed onto more replicas, and as traffic
decreases, some of these extra replicas may be freed.
default: '1'
optional: true
- name: max_replica_count
type: Integer
description: |-
Optional. The maximum number of replicas this deployed model may
be deployed on when the traffic against it increases. If requested
value is too large, the deployment will error, but if deployment
succeeds then the ability to scale the model to that many replicas
is guaranteed (barring service outages). If traffic against the
deployed model increases beyond what its replicas at maximum may
handle, a portion of the traffic will be dropped. If this value
is not provided, the smaller value of min_replica_count or 1 will
be used.
default: '1'
optional: true
- name: accelerator_type
type: String
description: |-
Optional. Hardware accelerator type. Must also set accelerator_count if used.
One of ACCELERATOR_TYPE_UNSPECIFIED, NVIDIA_TESLA_K80, NVIDIA_TESLA_P100,
NVIDIA_TESLA_V100, NVIDIA_TESLA_P4, NVIDIA_TESLA_T4
optional: true
- {name: accelerator_count, type: Integer, description: Optional. The number of accelerators
to attach to a worker replica., optional: true}
outputs:
- {name: endpoint_name, type: String}
- {name: endpoint_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.7.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.7.0'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def deploy_model_to_endpoint_for_Google_Cloud_Vertex_AI_Model(
model_name,
endpoint_name = None,
machine_type = "n1-standard-2",
min_replica_count = 1,
max_replica_count = 1,
accelerator_type = None,
accelerator_count = None,
#
# Uncomment when anyone requests these:
# deployed_model_display_name: str = None,
# traffic_percentage: int = 0,
# traffic_split: dict = None,
# service_account: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
#
# encryption_spec_key_name: str = None,
):
"""Deploys Google Cloud Vertex AI Model to a Google Cloud Vertex AI Endpoint.
Args:
model_name: Full resource name of a Google Cloud Vertex AI Model
endpoint_name: Optional. Full name of Google Cloud Vertex Endpoint. A new
endpoint is created if the name is not passed.
machine_type: The type of the machine. See the [list of machine types
supported for prediction
](https://cloud.google.com/vertex-ai/docs/predictions/configure-compute#machine-types).
Defaults to "n1-standard-2"
min_replica_count (int):
Optional. The minimum number of machine replicas this deployed
model will be always deployed on. If traffic against it increases,
it may dynamically be deployed onto more replicas, and as traffic
decreases, some of these extra replicas may be freed.
max_replica_count (int):
Optional. The maximum number of replicas this deployed model may
be deployed on when the traffic against it increases. If requested
value is too large, the deployment will error, but if deployment
succeeds then the ability to scale the model to that many replicas
is guaranteed (barring service outages). If traffic against the
deployed model increases beyond what its replicas at maximum may
handle, a portion of the traffic will be dropped. If this value
is not provided, the smaller value of min_replica_count or 1 will
be used.
accelerator_type (str):
Optional. Hardware accelerator type. Must also set accelerator_count if used.
One of ACCELERATOR_TYPE_UNSPECIFIED, NVIDIA_TESLA_K80, NVIDIA_TESLA_P100,
NVIDIA_TESLA_V100, NVIDIA_TESLA_P4, NVIDIA_TESLA_T4
accelerator_count (int):
Optional. The number of accelerators to attach to a worker replica.
"""
import json
from google.cloud import aiplatform
model = aiplatform.Model(model_name=model_name)
if endpoint_name:
endpoint = aiplatform.Endpoint(endpoint_name=endpoint_name)
else:
endpoint_display_name = model.display_name[:118] + "_endpoint"
endpoint = aiplatform.Endpoint.create(
display_name=endpoint_display_name,
project=model.project,
location=model.location,
# encryption_spec_key_name=encryption_spec_key_name,
labels={"component-source": "github-com-ark-kun-pipeline-components"},
)
endpoint = model.deploy(
endpoint=endpoint,
# deployed_model_display_name=deployed_model_display_name,
machine_type=machine_type,
min_replica_count=min_replica_count,
max_replica_count=max_replica_count,
accelerator_type=accelerator_type,
accelerator_count=accelerator_count,
# service_account=service_account,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
# encryption_spec_key_name=encryption_spec_key_name,
)
endpoint_json = json.dumps(endpoint.to_dict(), indent=2)
print(endpoint_json)
return (endpoint.resource_name, endpoint_json)
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import argparse
_parser = argparse.ArgumentParser(prog='Deploy model to endpoint for Google Cloud Vertex AI Model', description='Deploys Google Cloud Vertex AI Model to a Google Cloud Vertex AI Endpoint.')
_parser.add_argument("--model-name", dest="model_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--endpoint-name", dest="endpoint_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--machine-type", dest="machine_type", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--min-replica-count", dest="min_replica_count", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--max-replica-count", dest="max_replica_count", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--accelerator-type", dest="accelerator_type", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--accelerator-count", dest="accelerator_count", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = deploy_model_to_endpoint_for_Google_Cloud_Vertex_AI_Model(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model-name
- {inputValue: model_name}
- if:
cond: {isPresent: endpoint_name}
then:
- --endpoint-name
- {inputValue: endpoint_name}
- if:
cond: {isPresent: machine_type}
then:
- --machine-type
- {inputValue: machine_type}
- if:
cond: {isPresent: min_replica_count}
then:
- --min-replica-count
- {inputValue: min_replica_count}
- if:
cond: {isPresent: max_replica_count}
then:
- --max-replica-count
- {inputValue: max_replica_count}
- if:
cond: {isPresent: accelerator_type}
then:
- --accelerator-type
- {inputValue: accelerator_type}
- if:
cond: {isPresent: accelerator_count}
then:
- --accelerator-count
- {inputValue: accelerator_count}
- '----output-paths'
- {outputPath: endpoint_name}
- {outputPath: endpoint_dict}
@@ -1,297 +0,0 @@
name: Upload PyTorch model archive to Google Cloud Vertex AI
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model_archive, type: PyTorchModelArchive}
- {name: torchserve_version, type: String, default: 0.6.0, optional: true}
- name: use_gpu
type: Boolean
default: "False"
optional: true
- {name: display_name, type: String, optional: true}
- {name: description, type: String, optional: true}
- {name: project, type: String, optional: true}
- {name: location, type: String, optional: true}
- {name: labels, type: JsonObject, optional: true}
- {name: staging_bucket, type: String, optional: true}
outputs:
- {name: model_name, type: String}
- {name: model_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.13.1' 'google-cloud-build==3.8.3' || PIP_DISABLE_PIP_VERSION_CHECK=1
python3 -m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.13.1'
'google-cloud-build==3.8.3' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI(
model_archive_path,
torchserve_version = "0.6.0",
use_gpu = False,
display_name = None,
description = None,
# Uncomment when anyone requests these:
# instance_schema_uri: str = None,
# parameters_schema_uri: str = None,
# prediction_schema_uri: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
project = None,
location = None,
labels = None,
# encryption_spec_key_name: str = None,
staging_bucket = None,
):
import json
import os
from google.cloud import aiplatform
if not location:
location = os.environ.get("CLOUD_ML_REGION")
if not labels:
labels = {}
labels["component-source"] = "github-com-ark-kun-pipeline-components"
container_image_tag = torchserve_version + "-" + ("gpu" if use_gpu else "cpu")
container_image_uri = f"pytorch/torchserve:{container_image_tag}"
# Vertex Endpoints refuse to support non-Google container registries.
# We have to work around this to reduce user frustration
# TODO: Remove this code when Vertex Endpoints service starts supporting other container registries.
def copy_container_image(
src_container_image_uri,
dst_container_image_uri,
project_id,
):
from google.cloud.devtools import cloudbuild
from google import protobuf
build_client = cloudbuild.CloudBuildClient()
build_config = cloudbuild.Build(
images=[dst_container_image_uri],
steps=[
cloudbuild.BuildStep(
name="gcr.io/cloud-builders/docker",
entrypoint="bash",
args=[
"-exc",
'docker pull --quiet "$0" && docker tag "$0" "$1"',
src_container_image_uri,
dst_container_image_uri,
],
),
],
timeout=protobuf.duration_pb2.Duration(
seconds=1800,
),
)
build_operation = build_client.create_build(
project_id=project_id,
build=build_config,
)
try:
result = build_operation.result()
except:
print(f"Logs are available at [{build_operation.metadata.build.log_url}].")
raise
return result
project_id = aiplatform.initializer.global_config.project
mirrored_container_uri = f"gcr.io/{project_id}/container_mirror/{container_image_uri}"
# FIX: Only mirror when image does not exist
# docker does is unable to get the registry data from inside container (it cannot connecto to docker socket):
# docker.errors.DockerException: Error while fetching server API version: ('Connection aborted.', FileNotFoundError(2, 'No such file or directory'))
# import docker
# try:
# docker_client = docker.from_env()
# docker_client.images.get_registry_data(mirrored_container_uri)
# except docker.errors.NotFound:
if True:
print(f"Mirroring {container_image_uri} to {mirrored_container_uri}")
copy_container_image(
src_container_image_uri=container_image_uri,
dst_container_image_uri=mirrored_container_uri,
project_id=project_id,
)
container_image_uri = mirrored_container_uri
# End of container image mirroring code
model_archive_file_name = os.path.basename(model_archive_path)
model_archive_dir = os.path.dirname(model_archive_path)
model = aiplatform.Model.upload(
# FIX: Use public image or mirror the official image
#serving_container_image_uri="gcr.io/avolkov-31337/mirror/pytorch/torchserve",
serving_container_image_uri=container_image_uri,
artifact_uri=model_archive_dir,
serving_container_command=[
"bash",
"-exc",
'''
model_archive_uri="$0"
#model_archive_local_path=$(mktemp --suffix ".mar")
# For some reason the model must already be inside the model-store directory.
model_archive_local_path=./model-store/model.mar
# Downloading the model archive from GCS
# TODO: Fix gsutil bugs (requires project ID, has auth issues) and use gsutil instead.
# gsutil cp "$model_archive_uri" "$model_archive_local_path"
pip install google-cloud-storage
python -c '
import sys
from google.cloud import storage
model_archive_uri = sys.argv[1]
model_archive_local_path = sys.argv[2]
storage_client = storage.Client()
blob = storage.Blob.from_string(uri=model_archive_uri, client=storage_client)
blob.download_to_filename(filename=model_archive_local_path)
' "$model_archive_uri" "$model_archive_local_path"
#Note: config.properties is owned by root. Our user is not root.
echo "
service_envelope=json
# Needed for external access
inference_address=http://0.0.0.0:8080
management_address=http://0.0.0.0:8081
" > config2.properties
torchserve --start --foreground --no-config-snapshots --models main-model="$model_archive_local_path" --model-store ./model-store/ --ts-config config2.properties
''',
"$(AIP_STORAGE_URI)/" + model_archive_file_name,
],
serving_container_predict_route="/predictions/main-model",
#serving_container_predict_route="/v1/models/main-model:predict",
serving_container_health_route="/ping",
serving_container_ports=[8080],
display_name=display_name,
description=description,
# instance_schema_uri=instance_schema_uri,
# parameters_schema_uri=parameters_schema_uri,
# prediction_schema_uri=prediction_schema_uri,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
project=project,
location=location,
labels=labels,
# encryption_spec_key_name=encryption_spec_key_name,
staging_bucket=staging_bucket,
)
model_json = json.dumps(model.to_dict(), indent=2)
print(model_json)
return (model.resource_name, model_json)
def _deserialize_bool(s) -> bool:
from distutils.util import strtobool
return strtobool(s) == 1
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import json
import argparse
_parser = argparse.ArgumentParser(prog='Upload PyTorch model archive to Google Cloud Vertex AI', description='')
_parser.add_argument("--model-archive", dest="model_archive_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--torchserve-version", dest="torchserve_version", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--use-gpu", dest="use_gpu", type=_deserialize_bool, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model-archive
- {inputPath: model_archive}
- if:
cond: {isPresent: torchserve_version}
then:
- --torchserve-version
- {inputValue: torchserve_version}
- if:
cond: {isPresent: use_gpu}
then:
- --use-gpu
- {inputValue: use_gpu}
- if:
cond: {isPresent: display_name}
then:
- --display-name
- {inputValue: display_name}
- if:
cond: {isPresent: description}
then:
- --description
- {inputValue: description}
- if:
cond: {isPresent: project}
then:
- --project
- {inputValue: project}
- if:
cond: {isPresent: location}
then:
- --location
- {inputValue: location}
- if:
cond: {isPresent: labels}
then:
- --labels
- {inputValue: labels}
- if:
cond: {isPresent: staging_bucket}
then:
- --staging-bucket
- {inputValue: staging_bucket}
- '----output-paths'
- {outputPath: model_name}
- {outputPath: model_dict}
@@ -1,181 +0,0 @@
name: Upload Scikit learn pickle model to Google Cloud Vertex AI
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model, type: ScikitLearnPickleModel}
- {name: sklearn_version, type: String, optional: true}
- {name: display_name, type: String, optional: true}
- {name: description, type: String, optional: true}
- {name: project, type: String, optional: true}
- {name: location, type: String, optional: true}
- {name: labels, type: JsonObject, optional: true}
- {name: staging_bucket, type: String, optional: true}
outputs:
- {name: model_name, type: String}
- {name: model_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.16.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.16.0'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI(
model_path,
sklearn_version = None,
display_name = None,
description = None,
# Uncomment when anyone requests these:
# instance_schema_uri: str = None,
# parameters_schema_uri: str = None,
# prediction_schema_uri: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
project = None,
location = None,
labels = None,
# encryption_spec_key_name: str = None,
staging_bucket = None,
):
import json
import os
import shutil
import tempfile
from google.cloud import aiplatform
if not location:
location = os.environ.get("CLOUD_ML_REGION")
if not labels:
labels = {}
labels["component-source"] = "github-com-ark-kun-pipeline-components"
# The serving container decides the model type based on the model file extension.
# So we need to rename the mode file (e.g. /tmp/inputs/model/data) to *.pkl
_, renamed_model_path = tempfile.mkstemp(suffix=".pkl")
shutil.copyfile(src=model_path, dst=renamed_model_path)
model = aiplatform.Model.upload_scikit_learn_model_file(
model_file_path=renamed_model_path,
sklearn_version=sklearn_version,
display_name=display_name,
description=description,
# instance_schema_uri=instance_schema_uri,
# parameters_schema_uri=parameters_schema_uri,
# prediction_schema_uri=prediction_schema_uri,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
project=project,
location=location,
labels=labels,
# encryption_spec_key_name=encryption_spec_key_name,
staging_bucket=staging_bucket,
)
model_json = json.dumps(model.to_dict(), indent=2)
print(model_json)
return (model.resource_name, model_json)
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import json
import argparse
_parser = argparse.ArgumentParser(prog='Upload Scikit learn pickle model to Google Cloud Vertex AI', description='')
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--sklearn-version", dest="sklearn_version", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model
- {inputPath: model}
- if:
cond: {isPresent: sklearn_version}
then:
- --sklearn-version
- {inputValue: sklearn_version}
- if:
cond: {isPresent: display_name}
then:
- --display-name
- {inputValue: display_name}
- if:
cond: {isPresent: description}
then:
- --description
- {inputValue: description}
- if:
cond: {isPresent: project}
then:
- --project
- {inputValue: project}
- if:
cond: {isPresent: location}
then:
- --location
- {inputValue: location}
- if:
cond: {isPresent: labels}
then:
- --labels
- {inputValue: labels}
- if:
cond: {isPresent: staging_bucket}
then:
- --staging-bucket
- {inputValue: staging_bucket}
- '----output-paths'
- {outputPath: model_name}
- {outputPath: model_dict}
@@ -1,190 +0,0 @@
name: Upload Tensorflow model to Google Cloud Vertex AI
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model, type: TensorflowSavedModel}
- {name: tensorflow_version, type: String, optional: true}
- name: use_gpu
type: Boolean
default: "False"
optional: true
- {name: display_name, type: String, optional: true}
- {name: description, type: String, optional: true}
- {name: project, type: String, optional: true}
- {name: location, type: String, optional: true}
- {name: labels, type: JsonObject, optional: true}
- {name: staging_bucket, type: String, optional: true}
outputs:
- {name: model_name, type: String}
- {name: model_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.16.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.16.0'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def upload_Tensorflow_model_to_Google_Cloud_Vertex_AI(
model_path,
tensorflow_version = None,
use_gpu = False,
display_name = None,
description = None,
# Uncomment when anyone requests these:
# instance_schema_uri: str = None,
# parameters_schema_uri: str = None,
# prediction_schema_uri: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
project = None,
location = None,
labels = None,
# encryption_spec_key_name: str = None,
staging_bucket = None,
):
import json
import os
from google.cloud import aiplatform
if not location:
location = os.environ.get("CLOUD_ML_REGION")
if not labels:
labels = {}
labels["component-source"] = "github-com-ark-kun-pipeline-components"
model = aiplatform.Model.upload_tensorflow_saved_model(
saved_model_dir=model_path,
tensorflow_version=tensorflow_version,
use_gpu=use_gpu,
display_name=display_name,
description=description,
# instance_schema_uri=instance_schema_uri,
# parameters_schema_uri=parameters_schema_uri,
# prediction_schema_uri=prediction_schema_uri,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
project=project,
location=location,
labels=labels,
# encryption_spec_key_name=encryption_spec_key_name,
staging_bucket=staging_bucket,
)
model_json = json.dumps(model.to_dict(), indent=2)
print(model_json)
return (model.resource_name, model_json)
def _deserialize_bool(s) -> bool:
from distutils.util import strtobool
return strtobool(s) == 1
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import json
import argparse
_parser = argparse.ArgumentParser(prog='Upload Tensorflow model to Google Cloud Vertex AI', description='')
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--tensorflow-version", dest="tensorflow_version", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--use-gpu", dest="use_gpu", type=_deserialize_bool, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model
- {inputPath: model}
- if:
cond: {isPresent: tensorflow_version}
then:
- --tensorflow-version
- {inputValue: tensorflow_version}
- if:
cond: {isPresent: use_gpu}
then:
- --use-gpu
- {inputValue: use_gpu}
- if:
cond: {isPresent: display_name}
then:
- --display-name
- {inputValue: display_name}
- if:
cond: {isPresent: description}
then:
- --description
- {inputValue: description}
- if:
cond: {isPresent: project}
then:
- --project
- {inputValue: project}
- if:
cond: {isPresent: location}
then:
- --location
- {inputValue: location}
- if:
cond: {isPresent: labels}
then:
- --labels
- {inputValue: labels}
- if:
cond: {isPresent: staging_bucket}
then:
- --staging-bucket
- {inputValue: staging_bucket}
- '----output-paths'
- {outputPath: model_name}
- {outputPath: model_dict}
@@ -1,181 +0,0 @@
name: Upload XGBoost model to Google Cloud Vertex AI
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model, type: XGBoostModel}
- {name: xgboost_version, type: String, optional: true}
- {name: display_name, type: String, optional: true}
- {name: description, type: String, optional: true}
- {name: project, type: String, optional: true}
- {name: location, type: String, optional: true}
- {name: labels, type: JsonObject, optional: true}
- {name: staging_bucket, type: String, optional: true}
outputs:
- {name: model_name, type: String}
- {name: model_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.16.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.16.0'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def upload_XGBoost_model_to_Google_Cloud_Vertex_AI(
model_path,
xgboost_version = None,
display_name = None,
description = None,
# Uncomment when anyone requests these:
# instance_schema_uri: str = None,
# parameters_schema_uri: str = None,
# prediction_schema_uri: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
project = None,
location = None,
labels = None,
# encryption_spec_key_name: str = None,
staging_bucket = None,
):
import json
import os
import shutil
import tempfile
from google.cloud import aiplatform
if not location:
location = os.environ.get("CLOUD_ML_REGION")
if not labels:
labels = {}
labels["component-source"] = "github-com-ark-kun-pipeline-components"
# The serving container decides the model type based on the model file extension.
# So we need to rename the mode file (e.g. /tmp/inputs/model/data) to *.pkl
_, renamed_model_path = tempfile.mkstemp(suffix=".pkl")
shutil.copyfile(src=model_path, dst=renamed_model_path)
model = aiplatform.Model.upload_xgboost_model_file(
model_file_path=renamed_model_path,
xgboost_version=xgboost_version,
display_name=display_name,
description=description,
# instance_schema_uri=instance_schema_uri,
# parameters_schema_uri=parameters_schema_uri,
# prediction_schema_uri=prediction_schema_uri,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
project=project,
location=location,
labels=labels,
# encryption_spec_key_name=encryption_spec_key_name,
staging_bucket=staging_bucket,
)
model_json = json.dumps(model.to_dict(), indent=2)
print(model_json)
return (model.resource_name, model_json)
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import json
import argparse
_parser = argparse.ArgumentParser(prog='Upload XGBoost model to Google Cloud Vertex AI', description='')
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--xgboost-version", dest="xgboost_version", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = upload_XGBoost_model_to_Google_Cloud_Vertex_AI(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model
- {inputPath: model}
- if:
cond: {isPresent: xgboost_version}
then:
- --xgboost-version
- {inputValue: xgboost_version}
- if:
cond: {isPresent: display_name}
then:
- --display-name
- {inputValue: display_name}
- if:
cond: {isPresent: description}
then:
- --description
- {inputValue: description}
- if:
cond: {isPresent: project}
then:
- --project
- {inputValue: project}
- if:
cond: {isPresent: location}
then:
- --location
- {inputValue: location}
- if:
cond: {isPresent: labels}
then:
- --labels
- {inputValue: labels}
- if:
cond: {isPresent: staging_bucket}
then:
- --staging-bucket
- {inputValue: staging_bucket}
- '----output-paths'
- {outputPath: model_name}
- {outputPath: model_dict}
@@ -1,35 +0,0 @@
name: Download from GCS
inputs:
- {name: GCS path, type: String}
outputs:
- {name: Data}
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml'
implementation:
container:
image: google/cloud-sdk
command:
- bash # Pattern comparison only works in Bash
- -ex
- -c
- |
if [ -n "${GOOGLE_APPLICATION_CREDENTIALS}" ]; then
gcloud auth activate-service-account --key-file="${GOOGLE_APPLICATION_CREDENTIALS}"
fi
uri="$0"
output_path="$1"
# Checking whether the URI points to a single blob, a directory or a URI pattern
# URI points to a blob when that URI does not end with slash and listing that URI only yields the same URI
if [[ "$uri" != */ ]] && (gsutil ls "$uri" | grep --fixed-strings --line-regexp "$uri"); then
mkdir -p "$(dirname "$output_path")"
gsutil -m cp -r "$uri" "$output_path"
else
mkdir -p "$output_path" # When source path is a directory, gsutil requires the destination to also be a directory
gsutil -m rsync -r "$uri" "$output_path" # gsutil cp has different path handling than Linux cp. It always puts the source directory (name) inside the destination directory. gsutil rsync does not have that problem.
fi
- inputValue: GCS path
- outputPath: Data
@@ -1,113 +0,0 @@
name: Binarize column using Pandas on CSV data
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/pandas/Binarize_column/in_CSV_format/component.yaml'}
inputs:
- {name: table, type: CSV}
- {name: column_name, type: String}
- {name: predicate, type: String, default: '> 0', optional: true}
- {name: new_column_name, type: String, optional: true}
- name: keep_original_column
type: Boolean
default: "False"
optional: true
outputs:
- {name: transformed_table, type: CSV}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
--no-warn-script-location 'pandas==1.4.3' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def binarize_column_using_Pandas_on_CSV_data(
table_path,
transformed_table_path,
column_name,
predicate = "> 0",
new_column_name = None,
keep_original_column = False,
):
import pandas
df = pandas.read_csv(table_path).convert_dtypes()
original_series = df[column_name]
# Dynamically executing the predicate code
# Variable namespace for code execution
namespace = dict(x=original_series)
# I though that there should be no space before `predicate` so that "dot" predicate methods like ".between(min, max)" work.
# However Python allows spaces before dot: `df .isna()`.
# So having a space is not a problem
transform_code = f"""new_series_boolean = x {predicate}"""
# Note: exec() takes no keyword arguments
# exec(__source=transform_code, __globals=namespace)
exec(transform_code, namespace)
new_series_boolean = namespace["new_series_boolean"]
# There are multiple ways to convert boolean column to integer.
# .apply(int) might be faster. https://stackoverflow.com/a/49804868/1497385
# TODO: Do a proper benchmark.
new_series = new_series_boolean.apply(int)
# new_series = new_series_boolean.astype(int)
# new_series = new_series_boolean.replace({False: 0, True: 1})
if new_column_name:
df.insert(loc=0, column=new_column_name, value=new_series)
if not keep_original_column:
df = df.drop(columns=[column_name])
else:
df[column_name] = new_series
df.to_csv(transformed_table_path, index=False)
def _deserialize_bool(s) -> bool:
from distutils.util import strtobool
return strtobool(s) == 1
import argparse
_parser = argparse.ArgumentParser(prog='Binarize column using Pandas on CSV data', description='')
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--column-name", dest="column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--predicate", dest="predicate", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--new-column-name", dest="new_column_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--keep-original-column", dest="keep_original_column", type=_deserialize_bool, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--transformed-table", dest="transformed_table_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = binarize_column_using_Pandas_on_CSV_data(**_parsed_args)
args:
- --table
- {inputPath: table}
- --column-name
- {inputValue: column_name}
- if:
cond: {isPresent: predicate}
then:
- --predicate
- {inputValue: predicate}
- if:
cond: {isPresent: new_column_name}
then:
- --new-column-name
- {inputValue: new_column_name}
- if:
cond: {isPresent: keep_original_column}
then:
- --keep-original-column
- {inputValue: keep_original_column}
- --transformed-table
- {outputPath: transformed_table}
@@ -1,75 +0,0 @@
name: Fill all missing values using Pandas on CSV data
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml'}
inputs:
- {name: table, type: CSV}
- {name: replacement_value, type: String, default: '0', optional: true}
- {name: column_names, type: JsonArray, optional: true}
outputs:
- {name: transformed_table, type: CSV}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'pandas==1.4.1' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
--no-warn-script-location 'pandas==1.4.1' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def fill_all_missing_values_using_Pandas_on_CSV_data(
table_path,
transformed_table_path,
replacement_value = "0",
column_names = None,
):
import pandas
df = pandas.read_csv(
table_path,
dtype="string",
)
for column_name in column_names or df.columns:
df[column_name] = df[column_name].fillna(value=replacement_value)
df.to_csv(
transformed_table_path, index=False,
)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Fill all missing values using Pandas on CSV data', description='')
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--replacement-value", dest="replacement_value", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--column-names", dest="column_names", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--transformed-table", dest="transformed_table_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = fill_all_missing_values_using_Pandas_on_CSV_data(**_parsed_args)
args:
- --table
- {inputPath: table}
- if:
cond: {isPresent: replacement_value}
then:
- --replacement-value
- {inputValue: replacement_value}
- if:
cond: {isPresent: column_names}
then:
- --column-names
- {inputValue: column_names}
- --transformed-table
- {outputPath: transformed_table}
@@ -1,59 +0,0 @@
name: Select columns using Pandas on CSV data
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/pandas/Select_columns/in_CSV_format/component.yaml'}
inputs:
- {name: table, type: CSV}
- {name: column_names, type: JsonArray}
outputs:
- {name: transformed_table, type: CSV}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'pandas==1.4.2' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
--no-warn-script-location 'pandas==1.4.2' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def select_columns_using_Pandas_on_CSV_data(
table_path,
transformed_table_path,
column_names,
):
import pandas
df = pandas.read_csv(
table_path,
dtype="string",
)
df = df[column_names]
df.to_csv(transformed_table_path, index=False)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Select columns using Pandas on CSV data', description='')
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--column-names", dest="column_names", type=json.loads, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--transformed-table", dest="transformed_table_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = select_columns_using_Pandas_on_CSV_data(**_parsed_args)
args:
- --table
- {inputPath: table}
- --column-names
- {inputValue: column_names}
- --transformed-table
- {outputPath: transformed_table}
@@ -1,102 +0,0 @@
name: Create fully connected tensorflow network
description: Creates fully-connected network in Tensorflow SavedModel format
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/tensorflow/Create_fully_connected_network/component.yaml'}
inputs:
- {name: input_size, type: Integer}
- {name: hidden_layer_sizes, type: JsonArray, default: '[]', optional: true}
- {name: output_size, type: Integer, default: '1', optional: true}
- {name: activation_name, type: String, default: relu, optional: true}
- {name: output_activation_name, type: String, optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: model, type: TensorflowSavedModel}
implementation:
container:
image: tensorflow/tensorflow:2.7.0
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def create_fully_connected_tensorflow_network(
input_size,
model_path,
hidden_layer_sizes = [],
output_size = 1,
activation_name = "relu",
output_activation_name = None,
random_seed = 0,
):
"""Creates fully-connected network in Tensorflow SavedModel format"""
import tensorflow as tf
tf.random.set_seed(seed=random_seed)
model = tf.keras.models.Sequential()
model.add(tf.keras.Input(shape=(input_size,)))
for layer_size in hidden_layer_sizes:
model.add(tf.keras.layers.Dense(units=layer_size, activation=activation_name))
# The last layer is left without activation
model.add(tf.keras.layers.Dense(units=output_size, activation=output_activation_name))
print(model.summary())
# Using tf.keras.models.save_model instead of tf.saved_model.save to prevent downstream error:
#tf.saved_model.save(model, model_path)
# ValueError: Unable to create a Keras model from this SavedModel.
# This SavedModel was created with `tf.saved_model.save`, and lacks the Keras metadata.
# Please save your Keras model by calling `model.save`or `tf.keras.models.save_model`.
# See https://github.com/keras-team/keras/issues/16451
tf.keras.models.save_model(model, model_path)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Create fully connected tensorflow network', description='Creates fully-connected network in Tensorflow SavedModel format')
_parser.add_argument("--input-size", dest="input_size", type=int, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--hidden-layer-sizes", dest="hidden_layer_sizes", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--output-size", dest="output_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--activation-name", dest="activation_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--output-activation-name", dest="output_activation_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = create_fully_connected_tensorflow_network(**_parsed_args)
args:
- --input-size
- {inputValue: input_size}
- if:
cond: {isPresent: hidden_layer_sizes}
then:
- --hidden-layer-sizes
- {inputValue: hidden_layer_sizes}
- if:
cond: {isPresent: output_size}
then:
- --output-size
- {inputValue: output_size}
- if:
cond: {isPresent: activation_name}
then:
- --activation-name
- {inputValue: activation_name}
- if:
cond: {isPresent: output_activation_name}
then:
- --output-activation-name
- {inputValue: output_activation_name}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --model
- {outputPath: model}
@@ -1,100 +0,0 @@
name: Predict with TensorFlow model on CSV data
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/tensorflow/Predict/on_CSV/component.yaml'}
inputs:
- {name: dataset, type: CSV}
- {name: model, type: TensorflowSavedModel}
- {name: label_column_name, type: String, optional: true}
- {name: batch_size, type: Integer, default: '1000', optional: true}
outputs:
- {name: predictions}
implementation:
container:
image: tensorflow/tensorflow:2.9.1
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def predict_with_TensorFlow_model_on_CSV_data(
dataset_path,
model_path,
predictions_path,
label_column_name = None,
batch_size = 1000,
):
import numpy
import tensorflow as tf
model = tf.saved_model.load(export_dir=model_path)
dataset = tf.data.experimental.make_csv_dataset(
file_pattern=dataset_path,
batch_size=batch_size,
label_name=label_column_name,
header=True,
num_epochs=1,
shuffle=False,
ignore_errors=False,
)
def stack_feature_batches(features_batch):
# Need to stack individual feature columns to create a single feature tensor
# Need to cast all column tensor types to float to prevent errors.
list_of_feature_batches = list(
tf.cast(x=feature_batch, dtype=tf.float32)
for feature_batch in features_batch.values()
)
return tf.stack(list_of_feature_batches, axis=-1)
def transform_features_and_drop_labels(features_batch, labels_batch):
return stack_feature_batches(features_batch)
dataset_map_fn = (
transform_features_and_drop_labels
if label_column_name
else stack_feature_batches
)
dataset = dataset.map(dataset_map_fn)
with open(predictions_path, "w") as predictions_file:
for features_batch in dataset:
predictions_tensor = model(features_batch)
numpy.savetxt(predictions_file, predictions_tensor.numpy())
import argparse
_parser = argparse.ArgumentParser(prog='Predict with TensorFlow model on CSV data', description='')
_parser.add_argument("--dataset", dest="dataset_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--batch-size", dest="batch_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--predictions", dest="predictions_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = predict_with_TensorFlow_model_on_CSV_data(**_parsed_args)
args:
- --dataset
- {inputPath: dataset}
- --model
- {inputPath: model}
- if:
cond: {isPresent: label_column_name}
then:
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: batch_size}
then:
- --batch-size
- {inputValue: batch_size}
- --predictions
- {outputPath: predictions}
@@ -1,170 +0,0 @@
name: Train model using Keras on CSV
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml'}
inputs:
- {name: training_data, type: CSV}
- {name: model, type: TensorflowSavedModel}
- {name: label_column_name, type: String}
- {name: loss_function_name, type: String, default: mean_squared_error, optional: true}
- {name: number_of_epochs, type: Integer, default: '1', optional: true}
- {name: learning_rate, type: Float, default: '0.1', optional: true}
- {name: optimizer_name, type: String, default: Adadelta, optional: true}
- {name: optimizer_parameters, type: JsonObject, optional: true}
- {name: batch_size, type: Integer, default: '32', optional: true}
- {name: metric_names, type: JsonArray, optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: trained_model, type: TensorflowSavedModel}
implementation:
container:
image: tensorflow/tensorflow:2.8.0
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_model_using_Keras_on_CSV(
training_data_path,
model_path,
trained_model_path,
label_column_name,
loss_function_name = "mean_squared_error",
number_of_epochs = 1,
learning_rate = 0.1,
optimizer_name = "Adadelta",
optimizer_parameters = None,
batch_size = 32,
metric_names = None,
random_seed = 0,
):
import tensorflow as tf
tf.random.set_seed(seed=random_seed)
# Loading model using Keras. Model loaded using TensorFlow does not have .fit.
#model = tf.saved_model.load(export_dir=model_path)
keras_model = tf.keras.models.load_model(filepath=model_path)
optimizer_parameters = optimizer_parameters or {}
optimizer_parameters["learning_rate"] = learning_rate
optimizer_config = {
"class_name": optimizer_name,
"config": optimizer_parameters,
}
optimizer = tf.keras.optimizers.get(optimizer_config)
loss = tf.keras.losses.get(loss_function_name)
training_dataset = tf.data.experimental.make_csv_dataset(
file_pattern=training_data_path,
batch_size=batch_size,
label_name=label_column_name,
header=True,
# Need to specify num_epochs=1 otherwise the training becomes infinite
num_epochs=1,
shuffle=True,
shuffle_seed=random_seed,
ignore_errors=True,
)
def stack_feature_batches(features_batch, labels_batch):
# Need to stack individual feature columns to create a single feature tensor
# Need to cast all column tensor types to float to prevent error:
# TypeError: Tensors in list passed to 'values' of 'Pack' Op have types [int32, float32, float32, int32, int32] that don't all match.
list_of_feature_batches = list(tf.cast(x=feature_batch, dtype=tf.float32) for feature_batch in features_batch.values())
return tf.stack(list_of_feature_batches, axis=-1), labels_batch
training_dataset = training_dataset.map(stack_feature_batches)
# Need to compile the model to prevent error:
# ValueError: No gradients provided for any variable: [..., ...].
keras_model.compile(
optimizer=optimizer,
loss=loss,
metrics=metric_names,
)
keras_model.fit(
training_dataset,
epochs=number_of_epochs,
)
# Using tf.keras.models.save_model instead of tf.saved_model.save to prevent downstream error:
#tf.saved_model.save(keras_model, trained_model_path)
# ValueError: Unable to create a Keras model from this SavedModel.
# This SavedModel was created with `tf.saved_model.save`, and lacks the Keras metadata.
# Please save your Keras model by calling `model.save`or `tf.keras.models.save_model`.
# See https://github.com/keras-team/keras/issues/16451
tf.keras.models.save_model(keras_model, trained_model_path)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Train model using Keras on CSV', description='')
_parser.add_argument("--training-data", dest="training_data_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--loss-function-name", dest="loss_function_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--number-of-epochs", dest="number_of_epochs", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--learning-rate", dest="learning_rate", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--optimizer-name", dest="optimizer_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--optimizer-parameters", dest="optimizer_parameters", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--batch-size", dest="batch_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--metric-names", dest="metric_names", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--trained-model", dest="trained_model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = train_model_using_Keras_on_CSV(**_parsed_args)
args:
- --training-data
- {inputPath: training_data}
- --model
- {inputPath: model}
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: loss_function_name}
then:
- --loss-function-name
- {inputValue: loss_function_name}
- if:
cond: {isPresent: number_of_epochs}
then:
- --number-of-epochs
- {inputValue: number_of_epochs}
- if:
cond: {isPresent: learning_rate}
then:
- --learning-rate
- {inputValue: learning_rate}
- if:
cond: {isPresent: optimizer_name}
then:
- --optimizer-name
- {inputValue: optimizer_name}
- if:
cond: {isPresent: optimizer_parameters}
then:
- --optimizer-parameters
- {inputValue: optimizer_parameters}
- if:
cond: {isPresent: batch_size}
then:
- --batch-size
- {inputValue: batch_size}
- if:
cond: {isPresent: metric_names}
then:
- --metric-names
- {inputValue: metric_names}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --trained-model
- {outputPath: trained_model}
@@ -1,33 +0,0 @@
# PyTorch Efficient Training Examples
This folder provides PyTorch efficient training examples using ResNet-50 and ImageNet data.
## Requirements
```shell
pip install --upgrade pip
pip install -r requirements.txt
```
## Description
* resnet.py - Train ResNet-50 on single GPU.
* resnet_dp.py - Train ResNet-50 on single node multiple GPUs with `DataParallel` strategy.
* resnet_ddp.py - Train ResNet-50 on single node multiple GPUs with `DistributedDataParallel` strategy.
* resnet_ddp_wds.py - Train ResNet-50 on single node multiple GPUs with `DistributedDataParallel` strategy and `Webdataset`.
* resnet_fsdp.py - Train ResNet-50 on single node multiple GPUs with `FullyShardedDataParallel` strategy.
* resnet_fsdp_wds.py - Train ResNet-50 on single node multiple GPUs with `FullyShardedDataParallel` strategy and `Webdataset`.
* shard_imagenet.py - Shard ImagNet individual files into `tar` files.
## Benchmark
When run the benchmark on Nvidia T4 GPUs using ImageNet validation dataset, you can get the result like:
Strategy | Seconds/Epoch - Local Data | Seconds/Epoch - Cloud Data
---------------------- | -------------------------- | --------------------------
On 1 GPU | 489 | 804 (2x slower)
On 4 GPUs (DP) | 157 | 738 (5x slower)
On 4 GPUs (DDP) | 134 | 432 (3x slower)
On 4 GPUs (DDP + WDS) | 131 | 133 (same performance)
On 4 GPUs (FSDP) | 139 | 353 (3x slower)
On 4 GPUs (FSDP + WDS) | 138 | 135 (same performance)
@@ -1 +0,0 @@
webdataset == 0.2.26
@@ -1,197 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on single GPU."""
import argparse
import time
from PIL import Image
import torch
from torch import nn
import torchmetrics
import torchvision
from torchvision.models import resnet50
class ImageFolder(torchvision.datasets.ImageFolder):
"""Class for loading imagenet."""
def __init__(self, image_list_file, transform=None, target_transform=None):
self.samples = self._make_dataset(image_list_file)
self.loader = self._loader
self.imgs = self.samples
self.targets = [s[1] for s in self.samples]
self.transform = transform
self.target_transform = target_transform
def _make_dataset(self, image_list_file):
items = []
with open(image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
return items
def _loader(self, image_path):
with open(image_path, 'rb') as f:
img = Image.open(f)
img = img.convert('RGB')
return img
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image, target = image.to(device), target.to(device)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image, target = image.to(device), target.to(device)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def run_training(args):
"""Run training and evaluation."""
# Create model.
model = resnet50(weights=None)
model = model.to(args.device)
# Create train dataloader.
train_dataset = ImageFolder(
image_list_file=args.train_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.RandomResizedCrop(224),
torchvision.transforms.RandomHorizontalFlip(),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
train_dataloader = torch.utils.data.DataLoader(
dataset=train_dataset,
batch_size=args.train_batch_size,
shuffle=True,
num_workers=args.dataloader_num_workers,
pin_memory=True)
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
f'num workers: {train_dataloader.num_workers}, '
f'batch size: {args.train_batch_size}, '
f'batches/epoch: {len(train_dataloader)}')
# Create eval dataloader.
eval_dataset = ImageFolder(
image_list_file=args.eval_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.Resize(256),
torchvision.transforms.CenterCrop(224),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
eval_dataloader = torch.utils.data.DataLoader(
dataset=eval_dataset,
batch_size=args.eval_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
drop_last=True)
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
f'num workers: {eval_dataloader.num_workers}, '
f'batch size: {args.eval_batch_size}, '
f'batches/epoch: {len(eval_dataloader)}')
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
print(f'Running epoch {epoch}')
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--epochs',
default=1,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation')
args = parser.parse_args()
return args
def main():
args = create_args()
args.device = torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')
print('Launch job on 1 GPU')
run_training(args)
if __name__ == '__main__':
main()
@@ -1,234 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on multiple GPUs with DDP."""
import argparse
import os
import time
from PIL import Image
import torch
from torch import nn
import torch.distributed as dist
import torch.multiprocessing as mp
import torchmetrics
import torchvision
from torchvision.models import resnet50
class ImageFolder(torchvision.datasets.ImageFolder):
"""Class for loading imagenet."""
def __init__(self, image_list_file, transform=None, target_transform=None):
self.samples = self._make_dataset(image_list_file)
self.loader = self._loader
self.imgs = self.samples
self.targets = [s[1] for s in self.samples]
self.transform = transform
self.target_transform = target_transform
def _make_dataset(self, image_list_file):
items = []
with open(image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
return items
def _loader(self, image_path):
with open(image_path, 'rb') as f:
img = Image.open(f)
img = img.convert('RGB')
return img
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def worker(gpu, args):
"""Run training and evaluation."""
# Init process group.
print(f'Initiating process {gpu}')
dist.init_process_group(
backend='nccl',
init_method='env://',
world_size=args.gpus,
rank=gpu)
# Create model.
model = resnet50(weights=None)
torch.cuda.set_device(gpu)
model.to(args.device)
model = torch.nn.SyncBatchNorm.convert_sync_batchnorm(model)
model = nn.parallel.DistributedDataParallel(model, device_ids=[gpu])
# Create train dataloader.
train_dataset = ImageFolder(
image_list_file=args.train_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.RandomResizedCrop(224),
torchvision.transforms.RandomHorizontalFlip(),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
train_sampler = torch.utils.data.distributed.DistributedSampler(
train_dataset, num_replicas=args.gpus, rank=gpu)
train_dataloader = torch.utils.data.DataLoader(
dataset=train_dataset,
batch_size=args.train_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
sampler=train_sampler)
if gpu == 0:
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
f'num workers: {train_dataloader.num_workers}, '
f'global batch size: {args.train_batch_size * args.gpus}, '
f'batches/epoch: {len(train_dataloader)}')
# Create eval dataloader.
eval_dataset = ImageFolder(
image_list_file=args.eval_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.Resize(256),
torchvision.transforms.CenterCrop(224),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
eval_sampler = torch.utils.data.distributed.DistributedSampler(
eval_dataset, num_replicas=args.gpus, rank=gpu)
eval_dataloader = torch.utils.data.DataLoader(
dataset=eval_dataset,
batch_size=args.eval_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
drop_last=True,
sampler=eval_sampler)
if gpu == 0:
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
f'num workers: {eval_dataloader.num_workers}, '
f'batch size: {args.eval_batch_size}, '
f'batches/epoch: {len(eval_dataloader)}')
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
if gpu == 0:
print(f'Running epoch {epoch}')
train_sampler.set_epoch(epoch)
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
if gpu == 0:
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
if gpu == 0:
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
if gpu == 0:
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=1,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
args = parser.parse_args()
return args
def main():
args = create_args()
os.environ['MASTER_ADDR'] = 'localhost'
os.environ['MASTER_PORT'] = '8888'
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
print(f'Launch job on {args.gpus} GPUs with DDP')
mp.spawn(worker, nprocs=args.gpus, args=(args,))
if __name__ == '__main__':
main()
@@ -1,249 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on multiple GPUs with DDP."""
import argparse
import functools
import itertools
import math
import os
import time
import torch
from torch import nn
import torch.distributed as dist
import torch.multiprocessing as mp
import torchmetrics
from torchvision.models import resnet50
from torchvision.transforms import transforms
import webdataset as wds
def wds_split(src, rank, world_size):
"""Shards split function for webdataset."""
# The context of caller of this function is within multiple processes
# (by DDP world_size) and multiple workers (by dataloader_num_workers).
# So we totally have (world_size * num_workers) workers for processing data.
# NOTE: Raw data should be sharded to enough shards to make sure one process
# can handle at least one shard, otherwise the process may hang.
worker_id = 0
num_workers = 1
worker_info = torch.utils.data.get_worker_info()
if worker_info:
worker_id = worker_info.id
num_workers = worker_info.num_workers
for s in itertools.islice(src, rank * num_workers + worker_id, None,
world_size * num_workers):
yield s
def identity(x):
return x
def create_wds_dataloader(rank, args, mode):
"""Create webdataset dataset and dataloader."""
if mode == 'train':
transform = transforms.Compose([
transforms.RandomResizedCrop(224),
transforms.RandomHorizontalFlip(),
transforms.ToTensor(),
transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
])
data_path = args.train_data_path
data_size = args.train_data_size
batch_size_local = args.train_batch_size
batch_size_global = args.train_batch_size * args.gpus
# Since webdataset disallows partial batch, we pad the last batch for train.
batches = int(math.ceil(data_size / batch_size_global))
else:
transform = transforms.Compose([
transforms.Resize(256),
transforms.CenterCrop(224),
transforms.ToTensor(),
transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
])
data_path = args.eval_data_path
data_size = args.eval_data_size
batch_size_local = args.eval_batch_size
batch_size_global = args.eval_batch_size * args.gpus
# Since webdataset disallows partial batch, we drop the last batch for eval.
batches = int(data_size / batch_size_global)
dataset = wds.DataPipeline(
wds.SimpleShardList(data_path),
functools.partial(wds_split, rank=rank, world_size=args.gpus),
wds.tarfile_to_samples(),
wds.decode('pil'),
wds.to_tuple('jpg;png;jpeg cls'),
wds.map_tuple(transform, identity),
wds.batched(batch_size_local, partial=False),
)
num_workers = args.dataloader_num_workers
dataloader = wds.WebLoader(
dataset=dataset,
batch_size=None,
shuffle=False,
num_workers=num_workers,
persistent_workers=True if num_workers > 0 else False,
pin_memory=True).repeat(nbatches=batches)
print(f'{mode} dataloader | samples: {data_size}, '
f'num_workers: {num_workers}, '
f'local batch size: {batch_size_local}, '
f'global batch size: {batch_size_global}, '
f'batches: {batches}')
return dataloader
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def worker(gpu, args):
"""Run training and evaluation."""
# Init process group.
print(f'Initiating process {gpu}')
dist.init_process_group(
backend='nccl',
init_method='env://',
world_size=args.gpus,
rank=gpu)
# Create model.
model = resnet50(weights=None)
torch.cuda.set_device(gpu)
model.to(args.device)
model = torch.nn.SyncBatchNorm.convert_sync_batchnorm(model)
model = nn.parallel.DistributedDataParallel(model, device_ids=[gpu])
# Create dataloader.
train_dataloader = create_wds_dataloader(gpu, args, 'train')
eval_dataloader = create_wds_dataloader(gpu, args, 'eval')
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
if gpu == 0:
print(f'Running epoch {epoch}')
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
if gpu == 0:
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
if gpu == 0:
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
if gpu == 0:
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=1,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--train_data_size',
default=50000,
type=int,
help='data size for training')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
parser.add_argument(
'--eval_data_size',
default=50000,
type=int,
help='data size for evaluation')
args = parser.parse_args()
return args
def main():
args = create_args()
os.environ['MASTER_ADDR'] = 'localhost'
os.environ['MASTER_PORT'] = '8888'
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
print(f'Launch job on {args.gpus} GPUs with DDP')
mp.spawn(worker, nprocs=args.gpus, args=(args,))
if __name__ == '__main__':
main()
@@ -1,207 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on multiple GPUs with DP."""
import argparse
import time
from PIL import Image
import torch
from torch import nn
import torchmetrics
import torchvision
from torchvision.models import resnet50
class ImageFolder(torchvision.datasets.ImageFolder):
"""Class for loading imagenet."""
def __init__(self, image_list_file, transform=None, target_transform=None):
self.samples = self._make_dataset(image_list_file)
self.loader = self._loader
self.imgs = self.samples
self.targets = [s[1] for s in self.samples]
self.transform = transform
self.target_transform = target_transform
def _make_dataset(self, image_list_file):
items = []
with open(image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
return items
def _loader(self, image_path):
with open(image_path, 'rb') as f:
img = Image.open(f)
img = img.convert('RGB')
return img
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image, target = image.to(device), target.to(device)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image, target = image.to(device), target.to(device)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def run_training(args):
"""Run training and evaluation."""
# Create model.
model = resnet50(weights=None)
model = nn.DataParallel(model)
model = model.to(args.device)
# Create train dataloader.
train_dataset = ImageFolder(
image_list_file=args.train_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.RandomResizedCrop(224),
torchvision.transforms.RandomHorizontalFlip(),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
train_dataloader = torch.utils.data.DataLoader(
dataset=train_dataset,
batch_size=args.train_batch_size,
shuffle=True,
num_workers=args.dataloader_num_workers,
pin_memory=True)
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
f'num workers: {train_dataloader.num_workers}, '
f'global batch size: {args.train_batch_size}, '
f'batches/epoch: {len(train_dataloader)}')
# Create eval dataloader.
eval_dataset = ImageFolder(
image_list_file=args.eval_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.Resize(256),
torchvision.transforms.CenterCrop(224),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
eval_dataloader = torch.utils.data.DataLoader(
dataset=eval_dataset,
batch_size=args.eval_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
drop_last=True)
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
f'num workers: {eval_dataloader.num_workers}, '
f'global batch size: {args.eval_batch_size}, '
f'batches/epoch: {len(eval_dataloader)}')
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
print(f'Running epoch {epoch}')
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=1,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
args = parser.parse_args()
return args
def main():
args = create_args()
args.device = torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')
args.train_batch_size *= args.gpus
args.eval_batch_size *= args.gpus
args.dataloader_num_workers *= args.gpus
print(f'Launch job on {args.gpus} GPU with nn.DataParallel')
run_training(args)
if __name__ == '__main__':
main()
@@ -1,242 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on multiple GPUs with FSDP."""
import argparse
import functools
import os
import time
from PIL import Image
import torch
from torch import nn
import torch.distributed as dist
from torch.distributed.fsdp import FullyShardedDataParallel as FSDP
from torch.distributed.fsdp.wrap import size_based_auto_wrap_policy
import torch.multiprocessing as mp
import torchmetrics
import torchvision
from torchvision.models import resnet50
class ImageFolder(torchvision.datasets.ImageFolder):
"""Class for loading imagenet."""
def __init__(self, image_list_file, transform=None, target_transform=None):
self.samples = self._make_dataset(image_list_file)
self.loader = self._loader
self.imgs = self.samples
self.targets = [s[1] for s in self.samples]
self.transform = transform
self.target_transform = target_transform
def _make_dataset(self, image_list_file):
items = []
with open(image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
return items
def _loader(self, image_path):
with open(image_path, 'rb') as f:
img = Image.open(f)
img = img.convert('RGB')
return img
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def worker(gpu, args):
"""Run training and evaluation."""
# Init process group.
print(f'Initiating process {gpu}')
dist.init_process_group(
backend='nccl',
init_method='env://',
world_size=args.gpus,
rank=gpu)
# Create train dataloader.
train_dataset = ImageFolder(
image_list_file=args.train_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.RandomResizedCrop(224),
torchvision.transforms.RandomHorizontalFlip(),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
train_sampler = torch.utils.data.distributed.DistributedSampler(
train_dataset, num_replicas=args.gpus, rank=gpu)
train_dataloader = torch.utils.data.DataLoader(
dataset=train_dataset,
batch_size=args.train_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
sampler=train_sampler)
if gpu == 0:
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
f'num workers: {train_dataloader.num_workers}, '
f'global batch size: {args.train_batch_size * args.gpus}, '
f'batches/epoch: {len(train_dataloader)}')
# Create eval dataloader.
eval_dataset = ImageFolder(
image_list_file=args.eval_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.Resize(256),
torchvision.transforms.CenterCrop(224),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
eval_sampler = torch.utils.data.distributed.DistributedSampler(
eval_dataset, num_replicas=args.gpus, rank=gpu)
eval_dataloader = torch.utils.data.DataLoader(
dataset=eval_dataset,
batch_size=args.eval_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
drop_last=True,
sampler=eval_sampler)
if gpu == 0:
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
f'num workers: {eval_dataloader.num_workers}, '
f'batch size: {args.eval_batch_size}, '
f'batches/epoch: {len(eval_dataloader)}')
# Wrap policy.
my_auto_wrap_policy = functools.partial(
size_based_auto_wrap_policy, min_num_params=100)
torch.cuda.set_device(gpu)
# Create model.
model = resnet50(weights=None)
model.to(args.device)
model = FSDP(model, auto_wrap_policy=my_auto_wrap_policy)
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
if gpu == 0:
print(f'Running epoch {epoch}')
train_sampler.set_epoch(epoch)
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
if gpu == 0:
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
if gpu == 0:
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
if gpu == 0:
print('Done')
dist.destroy_process_group()
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=2,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
args = parser.parse_args()
return args
def main():
args = create_args()
os.environ['MASTER_ADDR'] = 'localhost'
os.environ['MASTER_PORT'] = '8888'
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
print(f'Launch job on {args.gpus} GPUs with FSDP')
mp.spawn(worker, nprocs=args.gpus, args=(args,))
if __name__ == '__main__':
main()
@@ -1,240 +0,0 @@
"""Train resnet on multiple GPUs with DDP."""
import argparse
import functools
import itertools
import math
import os
import time
import torch
from torch import nn
import torch.distributed as dist
from torch.distributed.fsdp import FullyShardedDataParallel as FSDP
from torch.distributed.fsdp.wrap import size_based_auto_wrap_policy
import torch.multiprocessing as mp
import torchmetrics
from torchvision.models import resnet50
from torchvision.transforms import transforms
import webdataset as wds
def wds_split(src, rank, world_size):
"""Shards split function for webdataset."""
# The context of caller of this function is within multiple processes
# (by DDP world_size) and multiple workers (by dataloader_num_workers).
# So we totally have (world_size * num_workers) workers for processing data.
# NOTE: Raw data should be sharded to enough shards to make sure one process
# can handle at least one shard, otherwise the process may hang.
worker_id = 0
num_workers = 1
worker_info = torch.utils.data.get_worker_info()
if worker_info:
worker_id = worker_info.id
num_workers = worker_info.num_workers
for s in itertools.islice(src, rank * num_workers + worker_id, None,
world_size * num_workers):
yield s
def identity(x):
return x
def create_wds_dataloader(rank, args, mode):
"""Create webdataset dataset and dataloader."""
if mode == 'train':
transform = transforms.Compose([
transforms.RandomResizedCrop(224),
transforms.RandomHorizontalFlip(),
transforms.ToTensor(),
transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
])
data_path = args.train_data_path
data_size = args.train_data_size
batch_size_local = args.train_batch_size
batch_size_global = args.train_batch_size * args.gpus
# Since webdataset disallows partial batch, we pad the last batch for train.
batches = int(math.ceil(data_size / batch_size_global))
else:
transform = transforms.Compose([
transforms.Resize(256),
transforms.CenterCrop(224),
transforms.ToTensor(),
transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
])
data_path = args.eval_data_path
data_size = args.eval_data_size
batch_size_local = args.eval_batch_size
batch_size_global = args.eval_batch_size * args.gpus
# Since webdataset disallows partial batch, we drop the last batch for eval.
batches = int(data_size / batch_size_global)
dataset = wds.DataPipeline(
wds.SimpleShardList(data_path),
functools.partial(wds_split, rank=rank, world_size=args.gpus),
wds.tarfile_to_samples(),
wds.decode('pil'),
wds.to_tuple('jpg;png;jpeg cls'),
wds.map_tuple(transform, identity),
wds.batched(batch_size_local, partial=False),
)
num_workers = args.dataloader_num_workers
dataloader = wds.WebLoader(
dataset=dataset,
batch_size=None,
shuffle=False,
num_workers=num_workers,
persistent_workers=True if num_workers > 0 else False,
pin_memory=True).repeat(nbatches=batches)
print(f'{mode} dataloader | samples: {data_size}, '
f'num_workers: {num_workers}, '
f'local batch size: {batch_size_local}, '
f'global batch size: {batch_size_global}, '
f'batches: {batches}')
return dataloader
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def worker(gpu, args):
"""Run training and evaluation."""
# Init process group.
print(f'Initiating process {gpu}')
dist.init_process_group(
backend='nccl',
init_method='env://',
world_size=args.gpus,
rank=gpu)
# Create dataloader.
train_dataloader = create_wds_dataloader(gpu, args, 'train')
eval_dataloader = create_wds_dataloader(gpu, args, 'eval')
# Wrap policy.
my_auto_wrap_policy = functools.partial(
size_based_auto_wrap_policy, min_num_params=100)
torch.cuda.set_device(gpu)
# Create model.
model = resnet50(weights=None)
model.to(args.device)
model = FSDP(model, auto_wrap_policy=my_auto_wrap_policy)
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
if gpu == 0:
print(f'Running epoch {epoch}')
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
if gpu == 0:
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
if gpu == 0:
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
if gpu == 0:
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=2,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--train_data_size',
default=50000,
type=int,
help='data size for training')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
parser.add_argument(
'--eval_data_size',
default=50000,
type=int,
help='data size for evaluation')
args = parser.parse_args()
return args
def main():
args = create_args()
os.environ['MASTER_ADDR'] = 'localhost'
os.environ['MASTER_PORT'] = '8888'
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
print(f'Launch job on {args.gpus} GPUs with FSDP')
mp.spawn(worker, nprocs=args.gpus, args=(args,))
if __name__ == '__main__':
main()
@@ -1,98 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
r"""Main function to shard ImageNet dataset.
Example usage:
python3 -u shard_imagenet.py \
--image_list_file=/home/jupyter/data/imagenet/train_list.txt \
--output_pattern=/home/jupyter/data/imagenet/validation-%06d.tar
"""
import argparse
import os
import random
import webdataset as wds # version: 0.2.26
# NOTE: only supports writing to local path,
# need gcsfuse mounting if want to write to gcs bucket.
def write_shards(args):
"""Shard individual data files."""
output_dir = os.path.dirname(args.output_pattern)
if not os.path.isdir(output_dir):
os.makedirs(output_dir)
items = []
# Image list file is a text file, each line is a pair (image_path, label).
with open(args.image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
# Shuffle items to avoid any large sequences of a single class
# in the dataset.
random.shuffle(items)
def _read_image(image_path):
with open(image_path, 'rb') as f:
return f.read()
with wds.ShardWriter(pattern=args.output_pattern,
maxcount=args.max_images_per_shard,
maxsize=args.max_bytes_per_shard) as sink:
for i, (image_path, target) in enumerate(items):
key = str(i)
image = _read_image(image_path)
sample = {'__key__': key, 'jpg': image, 'cls': target}
sink.write(sample)
if len(items) != sink.total:
raise ValueError('Items read {} != items written {}'.format(
len(items), sink.total))
def create_args():
"""Creates arg parser."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--image_list_file',
default='',
type=str,
help='path to image list file')
parser.add_argument(
'--output_pattern',
default='',
type=str,
help='the pattern for output shards, like /path/to/train-%06d.tar')
parser.add_argument(
'--max_images_per_shard',
default=10 * 1024,
type=int,
help='max number of images per shard')
parser.add_argument(
'--max_bytes_per_shard',
default=300 * 1024 * 1024,
type=int,
help='max bytes per shard')
args = parser.parse_args()
return args
def main():
args = create_args()
write_shards(args)
if __name__ == '__main__':
main()
@@ -0,0 +1,474 @@
{
"cells": [
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "a6b56b1c7b76"
},
"outputs": [],
"source": [
"# Copyright 2021 Google LLC\n",
"#\n",
"# Licensed under the Apache License, Version 2.0 (the \"License\");\n",
"# you may not use this file except in compliance with the License.\n",
"# You may obtain a copy of the License at\n",
"#\n",
"# https://www.apache.org/licenses/LICENSE-2.0\n",
"#\n",
"# Unless required by applicable law or agreed to in writing, software\n",
"# distributed under the License is distributed on an \"AS IS\" BASIS,\n",
"# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n",
"# See the License for the specific language governing permissions and\n",
"# limitations under the License."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "c414a395a19b"
},
"source": [
"# PyTorch Image Classification Multi-Node Distributed Data Parallel Training on CPU using Vertex Training with Custom Container"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "b98238e32cf7"
},
"source": [
"<table align=\"left\">\n",
" <td>\n",
" <a href=\"https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/master/community-content/pytorch_image_classification_distributed_data_parallel_training_with_vertex_sdk/multi_node_ddp_gloo_vertex_training_with_custom_container.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/github-logo-32px.png\" alt=\"GitHub logo\">\n",
" View on GitHub\n",
" </a>\n",
" </td>\n",
"</table>"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "03d216c7f7b1"
},
"source": [
"## Setup"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "c5ac73516218"
},
"outputs": [],
"source": [
"PROJECT_ID = \"YOUR PROJECT ID\"\n",
"BUCKET_NAME = \"gs://YOUR BUCKET NAME\"\n",
"REGION = \"YOUR REGION\"\n",
"SERVICE_ACCOUNT = \"YOUR SERVICE ACCOUNT\""
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "0b5ae674177e"
},
"outputs": [],
"source": [
"! gsutil ls -al $BUCKET_NAME"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "19a9b3bdd553"
},
"outputs": [],
"source": [
"content_name = \"pt-img-cls-multi-node-ddp-cust-cont\""
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "57bf6f8b4361"
},
"source": [
"## Local Training"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "e5d8a3443da0"
},
"outputs": [],
"source": [
"! ls trainer"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "07f79309472d"
},
"outputs": [],
"source": [
"! cat trainer/requirements.txt"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "e16cd8bb7483"
},
"outputs": [],
"source": [
"! pip install -r trainer/requirements.txt"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "0b8a210718c4"
},
"outputs": [],
"source": [
"! cat trainer/task.py"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "c0c6e7dfb3c6"
},
"outputs": [],
"source": [
"%run trainer/task.py --epochs 5 --no-cuda --local-mode"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "31dfdeede587"
},
"outputs": [],
"source": [
"! ls ./tmp"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "48d56ec621cc"
},
"outputs": [],
"source": [
"! rm -rf ./tmp"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "8f3ea1210749"
},
"source": [
"## Vertex Training using Vertex SDK and Custom Container"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "93002a20a2a6"
},
"source": [
"### Build Custom Container"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "4130ce43fd08"
},
"outputs": [],
"source": [
"hostname = \"gcr.io\"\n",
"image_name = content_name\n",
"tag = \"latest\"\n",
"\n",
"custom_container_image_uri = f\"{hostname}/{PROJECT_ID}/{image_name}:{tag}\""
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "2f1fc5b05240"
},
"outputs": [],
"source": [
"! cd trainer && docker build -t $custom_container_image_uri -f Dockerfile ."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "b4f274f499ac"
},
"outputs": [],
"source": [
"! docker run --rm $custom_container_image_uri --epochs 5 --no-cuda --local-mode"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "ee1a0a06d0b4"
},
"outputs": [],
"source": [
"! docker push $custom_container_image_uri"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "cb763be12fc9"
},
"outputs": [],
"source": [
"! gcloud container images list --repository $hostname/$PROJECT_ID"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "10c8cc6b3334"
},
"source": [
"### Initialize Vertex SDK"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "1a12348169fa"
},
"outputs": [],
"source": [
"! pip install -r requirements.txt"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "42e981cefe41"
},
"outputs": [],
"source": [
"from google.cloud import aiplatform\n",
"\n",
"aiplatform.init(\n",
" project=PROJECT_ID,\n",
" staging_bucket=BUCKET_NAME,\n",
" location=REGION,\n",
")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "73c92c9298e9"
},
"source": [
"### Create a Vertex Tensorboard Instance"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "bde509558cd5"
},
"outputs": [],
"source": [
"content_name = content_name + \"-cpu\""
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "6d7908c0083c"
},
"outputs": [],
"source": [
"tensorboard = aiplatform.Tensorboard.create(\n",
" display_name=content_name,\n",
")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "a1f0a4f54037"
},
"source": [
"#### Option: Use a Previously Created Vertex Tensorboard Instance\n",
"\n",
"```\n",
"tensorboard_name = \"Your Tensorboard Resource Name or Tensorboard ID\"\n",
"tensorboard = aiplatform.Tensorboard(tensorboard_name=tensorboard_name)\n",
"```"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "a4cac84e04ac"
},
"source": [
"### Run a Vertex SDK CustomContainerTrainingJob"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "f92e8fdd44ee"
},
"outputs": [],
"source": [
"display_name = content_name\n",
"gcs_output_uri_prefix = f\"{BUCKET_NAME}/{display_name}\"\n",
"\n",
"replica_count = 4\n",
"machine_type = \"n1-standard-4\"\n",
"\n",
"args = [\n",
" \"--backend\",\n",
" \"gloo\",\n",
" \"--no-cuda\",\n",
" \"--batch-size\",\n",
" \"128\",\n",
" \"--epochs\",\n",
" \"25\",\n",
"]"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "ae4c57df7e07"
},
"outputs": [],
"source": [
"custom_container_training_job = aiplatform.CustomContainerTrainingJob(\n",
" display_name=display_name,\n",
" container_uri=custom_container_image_uri,\n",
")"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "35cf3ecdf0df"
},
"outputs": [],
"source": [
"custom_container_training_job.run(\n",
" args=args,\n",
" base_output_dir=gcs_output_uri_prefix,\n",
" replica_count=replica_count,\n",
" machine_type=machine_type,\n",
" tensorboard=tensorboard.resource_name,\n",
" service_account=SERVICE_ACCOUNT,\n",
")"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "49d10dded73b"
},
"outputs": [],
"source": [
"print(f\"Custom Training Job Name: {custom_container_training_job.resource_name}\")\n",
"print(f\"GCS Output URI Prefix: {gcs_output_uri_prefix}\")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "78398f52807b"
},
"source": [
"### Training Output Artifact"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "fc74422de1d1"
},
"outputs": [],
"source": [
"! gsutil ls $gcs_output_uri_prefix"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "5e99a6a05b10"
},
"source": [
"## Clean Up Artifact"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "b0c1b3f7466b"
},
"outputs": [],
"source": [
"! gsutil rm -rf $gcs_output_uri_prefix"
]
}
],
"metadata": {
"colab": {
"name": "multi_node_ddp_gloo_vertex_training_with_custom_container.ipynb",
"toc_visible": true
},
"kernelspec": {
"display_name": "Python 3",
"name": "python3"
}
},
"nbformat": 4,
"nbformat_minor": 0
}
@@ -0,0 +1,347 @@
{
"cells": [
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "a6b56b1c7b76"
},
"outputs": [],
"source": [
"# Copyright 2021 Google LLC\n",
"#\n",
"# Licensed under the Apache License, Version 2.0 (the \"License\");\n",
"# you may not use this file except in compliance with the License.\n",
"# You may obtain a copy of the License at\n",
"#\n",
"# https://www.apache.org/licenses/LICENSE-2.0\n",
"#\n",
"# Unless required by applicable law or agreed to in writing, software\n",
"# distributed under the License is distributed on an \"AS IS\" BASIS,\n",
"# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n",
"# See the License for the specific language governing permissions and\n",
"# limitations under the License."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "20a5ea0081d0"
},
"source": [
"# PyTorch Image Classification Multi-Node Distributed Data Parallel Training on GPU using Vertex Training with Custom Container"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "8752d4a255fb"
},
"source": [
"<table align=\"left\">\n",
" <td>\n",
" <a href=\"https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/master/community-content/pytorch_image_classification_distributed_data_parallel_training_with_vertex_sdk/multi_node_ddp_nccl_vertex_training_with_custom_container.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/github-logo-32px.png\" alt=\"GitHub logo\">\n",
" View on GitHub\n",
" </a>\n",
" </td>\n",
"</table>"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "03d216c7f7b1"
},
"source": [
"## Setup"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "c5ac73516218"
},
"outputs": [],
"source": [
"PROJECT_ID = \"YOUR PROJECT ID\"\n",
"BUCKET_NAME = \"gs://YOUR BUCKET NAME\"\n",
"REGION = \"YOUR REGION\"\n",
"SERVICE_ACCOUNT = \"YOUR SERVICE ACCOUNT\""
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "0b5ae674177e"
},
"outputs": [],
"source": [
"! gsutil ls -al $BUCKET_NAME"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "19a9b3bdd553"
},
"outputs": [],
"source": [
"content_name = \"pt-img-cls-multi-node-ddp-cust-cont\""
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "5307fe28b633"
},
"source": [
"## Vertex Training using Vertex SDK and Custom Container"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "46cb58c7fbf9"
},
"source": [
"### Built Custom Container"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "97e66e9f9bab"
},
"outputs": [],
"source": [
"hostname = \"gcr.io\"\n",
"image_name = content_name\n",
"tag = \"latest\"\n",
"\n",
"custom_container_image_uri = f\"{hostname}/{PROJECT_ID}/{image_name}:{tag}\""
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "ae9b29c4773f"
},
"source": [
"### Initialize Vertex SDK"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "dc1e84d5dec2"
},
"outputs": [],
"source": [
"! pip install -r requirements.txt"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "6964be27b98e"
},
"outputs": [],
"source": [
"from google.cloud import aiplatform\n",
"\n",
"aiplatform.init(\n",
" project=PROJECT_ID,\n",
" staging_bucket=BUCKET_NAME,\n",
" location=REGION,\n",
")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "594a91f438f2"
},
"source": [
"### Create a Vertex Tensorboard Instance"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "93134273261e"
},
"outputs": [],
"source": [
"content_name = content_name + \"-gpu\""
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "c2bd82dbcd9b"
},
"outputs": [],
"source": [
"tensorboard = aiplatform.Tensorboard.create(\n",
" display_name=content_name,\n",
")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "ebc593c6472e"
},
"source": [
"#### Option: Use a Previously Created Vertex Tensorboard Instance\n",
"\n",
"```\n",
"tensorboard_name = \"Your Tensorboard Resource Name or Tensorboard ID\"\n",
"tensorboard = aiplatform.Tensorboard(tensorboard_name=tensorboard_name)\n",
"```"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "0769e8e34c2f"
},
"source": [
"### Run a Vertex SDK CustomContainerTrainingJob"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "023f33ece826"
},
"outputs": [],
"source": [
"display_name = content_name\n",
"gcs_output_uri_prefix = f\"{BUCKET_NAME}/{display_name}\"\n",
"\n",
"replica_count = 1\n",
"machine_type = \"n1-standard-4\"\n",
"accelerator_count = 4\n",
"accelerator_type = \"NVIDIA_TESLA_K80\"\n",
"\n",
"args = [\n",
" \"--backend\",\n",
" \"nccl\",\n",
" \"--batch-size\",\n",
" \"128\",\n",
" \"--epochs\",\n",
" \"25\",\n",
"]"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "d4b599e726ef"
},
"outputs": [],
"source": [
"custom_container_training_job = aiplatform.CustomContainerTrainingJob(\n",
" display_name=display_name,\n",
" container_uri=custom_container_image_uri,\n",
")"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "81321e3bdf7f"
},
"outputs": [],
"source": [
"custom_container_training_job.run(\n",
" args=args,\n",
" base_output_dir=gcs_output_uri_prefix,\n",
" replica_count=replica_count,\n",
" machine_type=machine_type,\n",
" accelerator_count=accelerator_count,\n",
" accelerator_type=accelerator_type,\n",
" tensorboard=tensorboard.resource_name,\n",
" service_account=SERVICE_ACCOUNT,\n",
")"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "5100712c2c4c"
},
"outputs": [],
"source": [
"print(f\"Custom Training Job Name: {custom_container_training_job.resource_name}\")\n",
"print(f\"GCS Output URI Prefix: {gcs_output_uri_prefix}\")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "f9b77676e5a6"
},
"source": [
"### Training Output Artifact"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "0e171ce95ace"
},
"outputs": [],
"source": [
"! gsutil ls $gcs_output_uri_prefix"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "cf1b74a12b87"
},
"source": [
"## Clean Up Artifact"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "a0b15089c341"
},
"outputs": [],
"source": [
"! gsutil rm -rf $gcs_output_uri_prefix"
]
}
],
"metadata": {
"colab": {
"name": "multi_node_ddp_nccl_vertex_training_with_custom_container.ipynb",
"toc_visible": true
},
"kernelspec": {
"display_name": "Python 3",
"name": "python3"
}
},
"nbformat": 4,
"nbformat_minor": 0
}
@@ -1,30 +0,0 @@
# PyTorch Deployment on Google Cloud: Text Classification
**This is an Experimental release**, covered by the Pre-GA Offerings Terms of your Google Cloud Platform [Terms of Service](https://cloud.google.com/terms).
Experiments are focused on validating a prototype and are not guaranteed to be released. They are not intended for production use or covered by any SLA, support obligation, or deprecation policy and might be subject to backward-incompatible changes.
**Kindly drop us a note before you run any scale tests.**
**Do not hesitate to contact vertexai-prediction-preview-feedback@google.com if you have any questions or run into any issues.**
The projects need to be added to the allowlist in order to deploy PyTorch models using Vertex AI Prediction pre-built PyTorch images. If you are interested in the feature, please send an email to vertexai-prediction-preview-feedback@google.com to provide your project numbers OR project ids.
## Overview
In the PyTorch on Google Cloud series of blog posts, we aim to share how to deploy PyTorch models at scale on [Vertex AI](https://cloud.google.com/vertex-ai).
This tutorial on text classification shows how to deploy a PyTorch based text classification model on [Vertex AI](https://cloud.google.com/vertex-ai/docs/start/client-libraries#python) using Vertex SDK and [`gcloud ai`](https://cloud.google.com/sdk/gcloud/reference/beta/ai).
## Notebooks
| <h4>Notebook</h4> | <h4>Description</h4> |
| :-------- | :------- |
| [pytorch-text-classification-vertex-ai-deploy.ipynb](./pytorch-text-classification-vertex-ai-deploy.ipynb) | Notebook to show deploying a PyTorch model on Vertex AI |
## Folders
| <h4>Folder Name</h4> | <h4>Description</h4> |
| :-------- | :------- |
| [`predictor`](./predictor) | Folder with custom prediction handler to deploy a PyTorch model to Vertex Prediction. In the [notebook](./pytorch-text-classification-vertex-ai-deploy.ipynb), this folder is used for deploying a PyTorch model on Vertex AI using Vertex Prediction pre-built PyTorch images |
@@ -1,91 +0,0 @@
import os
import json
import logging
import torch
from transformers import AutoModelForSequenceClassification, AutoTokenizer
from ts.torch_handler.base_handler import BaseHandler
logger = logging.getLogger(__name__)
class TransformersClassifierHandler(BaseHandler):
"""
The handler takes an input string and returns the classification text
based on the serialized transformers checkpoint.
"""
def __init__(self):
super(TransformersClassifierHandler, self).__init__()
self.initialized = False
def initialize(self, ctx):
""" Loads the model.pt file and initialized the model object.
Instantiates Tokenizer for preprocessor to use
Loads labels to name mapping file for post-processing inference response
"""
self.manifest = ctx.manifest
properties = ctx.system_properties
model_dir = properties.get("model_dir")
self.device = torch.device("cuda:" + str(properties.get("gpu_id")) if torch.cuda.is_available() else "cpu")
# Read model serialize/pt file
serialized_file = self.manifest["model"]["serializedFile"]
model_pt_path = os.path.join(model_dir, serialized_file)
if not os.path.isfile(model_pt_path):
raise RuntimeError("Missing the model.pt or pytorch_model.bin file")
# Load model
self.model = AutoModelForSequenceClassification.from_pretrained(model_dir)
self.model.to(self.device)
self.model.eval()
logger.debug('Transformer model from path {0} loaded successfully'.format(model_dir))
# Ensure to use the same tokenizer used during training
self.tokenizer = AutoTokenizer.from_pretrained('bert-base-cased')
# Read the mapping file, index to object name
mapping_file_path = os.path.join(model_dir, "index_to_name.json")
if os.path.isfile(mapping_file_path):
with open(mapping_file_path) as f:
self.mapping = json.load(f)
else:
logger.warning('Missing the index_to_name.json file. Inference output will default.')
self.mapping = {"0": "Negative", "1": "Positive"}
self.initialized = True
def preprocess(self, data):
""" Preprocessing input request by tokenizing
Extend with your own preprocessing steps as needed
"""
text = data[0].get("data")
if text is None:
text = data[0].get("body")
sentences = text.decode('utf-8')
logger.info("Received text: '%s'", sentences)
# Tokenize the texts
tokenizer_args = ((sentences,))
inputs = self.tokenizer(*tokenizer_args,
padding='max_length',
max_length=128,
truncation=True,
return_tensors = "pt")
return inputs
def inference(self, inputs):
""" Predict the class of a text using a trained transformer model.
"""
prediction = self.model(inputs['input_ids'].to(self.device))[0].argmax().item()
if self.mapping:
prediction = self.mapping[str(prediction)]
logger.info("Model predicted: '%s'", prediction)
return [prediction]
def postprocess(self, inference_output):
return inference_output
@@ -1,5 +0,0 @@
{
"0": "Negative",
"1": "Positive"
}
@@ -658,8 +658,8 @@
},
"outputs": [],
"source": [
"dataset = load_dataset(\"imdb\")\n",
"dataset"
"datasets = load_dataset(\"imdb\")\n",
"datasets"
]
},
{
@@ -668,7 +668,7 @@
"id": "RzfPtOMoIrIu"
},
"source": [
"The `dataset` object itself is [`DatasetDict`](https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasetdict), which contains one key for the training, validation and test set."
"The `datasets` object itself is [`DatasetDict`](https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasetdict), which contains one key for the training, validation and test set."
]
},
{
@@ -681,12 +681,12 @@
"source": [
"print(\n",
" \"Total # of rows in training dataset {} and size {:5.2f} MB\".format(\n",
" dataset[\"train\"].shape[0], dataset[\"train\"].size_in_bytes / (1024 * 1024)\n",
" datasets[\"train\"].shape[0], datasets[\"train\"].size_in_bytes / (1024 * 1024)\n",
" )\n",
")\n",
"print(\n",
" \"Total # of rows in test dataset {} and size {:5.2f} MB\".format(\n",
" dataset[\"test\"].shape[0], dataset[\"test\"].size_in_bytes / (1024 * 1024)\n",
" datasets[\"test\"].shape[0], datasets[\"test\"].size_in_bytes / (1024 * 1024)\n",
" )\n",
")"
]
@@ -708,7 +708,7 @@
},
"outputs": [],
"source": [
"dataset[\"train\"][0]"
"datasets[\"train\"][0]"
]
},
{
@@ -728,7 +728,7 @@
},
"outputs": [],
"source": [
"label_list = dataset[\"train\"].unique(\"label\")\n",
"label_list = datasets[\"train\"].unique(\"label\")\n",
"label_list"
]
},
@@ -779,7 +779,7 @@
},
"outputs": [],
"source": [
"show_random_elements(dataset[\"train\"])"
"show_random_elements(datasets[\"train\"])"
]
},
{
@@ -883,7 +883,7 @@
},
"outputs": [],
"source": [
"example = dataset[\"train\"][4]\n",
"example = datasets[\"train\"][4]\n",
"print(example)"
]
},
@@ -920,7 +920,7 @@
"source": [
"# Dataset loading repeated here to make this cell idempotent\n",
"# Since we are over-writing datasets variable\n",
"dataset = load_dataset(\"imdb\")\n",
"datasets = load_dataset(\"imdb\")\n",
"\n",
"# Mapping labels to ids\n",
"# NOTE: We can extract this automatically but the `Unique` method of the datasets\n",
@@ -948,7 +948,7 @@
"\n",
"\n",
"# apply preprocessing function to input examples\n",
"dataset = dataset.map(preprocess_function, batched=True, load_from_cache_file=True)"
"datasets = datasets.map(preprocess_function, batched=True, load_from_cache_file=True)"
]
},
{
@@ -1091,8 +1091,8 @@
"trainer = Trainer(\n",
" model,\n",
" args,\n",
" train_dataset=dataset[\"train\"],\n",
" eval_dataset=dataset[\"test\"],\n",
" train_dataset=datasets[\"train\"],\n",
" eval_dataset=datasets[\"test\"],\n",
" data_collator=default_data_collator,\n",
" tokenizer=tokenizer,\n",
" compute_metrics=compute_metrics,\n",
-102
View File
@@ -1,102 +0,0 @@
# Administrative Howto notes on CI Notebook Ingestion
This readme covers administrative actions that are performed on an as-needed basis.
## Team: vertex-ai-owners
Members of the vertex-ai-owners (git team) have administrative privileges.
### Viewing members
1. Goto the repo
2. From top-level menu, select: (Settings -> Collaborators and Teams)[https://github.com/GoogleCloudPlatform/vertex-ai-samples/settings/access]
### Adding a new member
If another member needs to be added:
- Have the new member make a request to join the team.
- vertex-ai-owners with the `Maintainer` tag may add the new member.
## Executing CI notebook ingestion checks on a PR
### Killing a stuck PR
If the CI notebook ingestion test is stuck (not terminating), you can kill the process by:
1. Goto the PR
2. Under checks, find the entry: vertex-ai-notebook-execution-test (python-docs-samples-tests) In progress —> Summary
3. Select Details
4. At bottom of details page, select: View more details on Google Cloud Build
5. In Cloud Build history page, select Cancel on the top menu bar.
### Restart a PR test
There are two ways to restart the CI notebook ingestion tests on an open PR.
1. In Cloud Build history page, select Rebuild on the top menu bar.
2. or, in a comment in the PR enter: /gcbrun
## Bypassing CI notebook ingestion checks on a PR
We strongly discourage this, unless there is a compelling reason that would impact the integrity of the quality process.
There are two ways of doing this. In both cases, you do:
1. Goto the repo
2. From top-level menu, select: (Settings -> Branches)[https://github.com/GoogleCloudPlatform/vertex-ai-samples/settings/branches]
3. Under Branch Protection Rules, select the `main` branch.
### Allowing a member to disable requirements for merging
Specific member(s) can be assigned the ability to override requirements and merge a PR, by:
1. Select Edit for the `main` branch in Branch Protection Rules.
2. Find the entry "Allow specified actors to bypass required pull requests".
3. Under this entry, add the member's git LDAP.
4. Select SAVE.
5. The "Squash and Merge" button will now be enabled on all PRs viewed by that member.
### Temporarily disable checks.
You can disable requirement checks temporarily on all PRs.
1. Select Edit for the `main` branch in Branch Protection Rules.
2. Uncheck:
- Require approvals
- Require review from Code Owners
- Require status checks to pass before merging
3. Select SAVE
4. Now all members will see a green "Squash and Merge" on all PRs viewed by that member.
To reverse, recheck the settings you unchecked above.
## Linting
To execute the identical lint image locally, from the CI notebook ingestion checks, do:
1. Goto the corresponding local folder in the repo.
2. Run: `docker run -v ${PWD}:/setup/app gcr.io/python-docs-samples-tests/notebook_linter:latest <your_notebooks>`
## Install dependency issues
Some packages (and combinations) have dependencies that fail on the virgin VM image used for the CI notebook ingestion test.
### TFDV
If the notebook installs and uses tensorflow_data_validation, install as follows:
! pip3 install -q {USER_FLAG} google-cloud-aiplatform \
tensorflow-data-validation \
protobuf==3.20.3
! pip3 install -q {USER_FLAG} cachetools==5.2.0
+3 -13
View File
@@ -7,33 +7,23 @@
/gapic @andrewferlitsch
/gapic/custom/showcase_custom_image_classification_online_explain_example_based_api.ipynb @inardini
/ml_ops @andrewferlitsch
/model_monitoring/* @andrewferlitsch
/model_monitoring/* @mco-gh
/structured_data/rapid_prototyping_* @rafael-carvalho
/managed_notebooks/
/bigquery_ml/ @polong
/sdk/SDK_FBProphet_Forecasting_Online.ipynb @brianchunkang
/pipelines/google_cloud_pipeline_components_TPU_model_train_upload_deploy.ipynb @brianchunkang
/explainable_ai/SDK_Custom_Container_XAI.ipynb @brianchunkang
/matching_engine/sdk_matching_engine_for_indexing.ipynb @ivanmkc
/matching_engine/matching_engine_for_indexing.ipynb @yinghsienwu
/matching_engine/stream_update_for_matching_engine.ipynb @peterping666
/sdk/pytorch_lightning_custom_container_training.ipynb @brianchunkang
/sdk/sdk_pytorch_torchrun_custom_container_training_imagenet.ipynb @brianchunkang
/tensorboard @yfang1
/feature_store @nayaknishant @morgandu
/prediction @googleapis/vertex-prediction-team
/vertex_endpoints/tf_hub_obj_detection/deploy_tfhub_object_detection_on_vertex_endpoints.ipynb @entrpn
/vertex_endpoints/find_ideal_machine_type/find_ideal_machine_type/find_ideal_machine_type.ipynb @entrpn
/vertex_endpoints/nvidia-triton/nvidia-triton-custom-container-prediction.ipynb @RajeshThallam
/vertex_endpoints/optimized_tensorflow_runtime @vlasenkoalexey
/notebooks/community/ml_ops/stage2/get_started_with_visionapi_and_automl.ipynb @mansari
/notebooks/community/neo4j/graph_paysim.ipynb @benofben @laeg
/notebooks/community/ml_ops/stage1/get_started_with_visionapi_and_vertex_datasets.ipynb @mansari
/notebooks/community/pipelines/google_cloud_pipeline_components_bqml_pipeline_demand_forecasting.ipynb @inardini
/notebooks/community/ml_ops/stage2/get_started_vertex_hpt_r_kernel.ipynb @fhirschmann
/notebooks/community/ml_ops/stage2/get_started_vertex_training_r_using_r_kernel.ipynb @fhirschmann
/notebooks/community/vertex-ai-samples/notebooks/community/model_registry/vertex_ai_model_registry_bqml_custom_model_versioning.ipynb @inardini
/notebooks/community/vertex-ai-samples/notebooks/community/model_registry/vertex_ai_model_registry_automl_model_versioning.ipynb @inardini
/notebooks/community/vizier/conversions_vertex_vizier_and_open_source_vizier.ipynb @halio-g
/notebooks/community/experiments/vertex_ai_model_experimentation.ipynb @inardini @asobran
/notebooks/community/pipelines/google_cloud_pipeline_components_bqml_pipeline_anomaly_detection.ipynb @inardini
/notebooks/community/pipelines/google_cloud_pipeline_components_bqml_pipeline_demand_forecasting.ipynb @inardini
File diff suppressed because it is too large Load Diff
@@ -29,28 +29,18 @@
"id": "JAPoU8Sm5E6e"
},
"source": [
"# Using Vertex AI Feature Store with Pandas Dataframe\n",
"\n",
"<table align=\"left\">\n",
" <td>\n",
" <a href=\"https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/official/feature_store/sdk-feature-store-pandas.ipynb\">\n",
" <td>\n",
" <a href=\"https://colab.research.google.com/github/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/feature_store/sdk-feature-store-pandas.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/colab-logo-32px.png\" alt=\"Colab logo\"> Run in Colab\n",
" </a>\n",
" </td>\n",
" <td>\n",
" <a href=\"https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/feature_store/sdk-feature-store-pandas.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/github-logo-32px.png\" alt=\"GitHub logo\">\n",
" View on GitHub\n",
" </a>\n",
" </td>\n",
" \n",
" <td>\n",
" <a href=\"https://colab.research.google.com/github/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/official/feature_store/sdk-feature-store-pandas.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/colab-logo-32px.png\" alt=\"Colab logo\"> \n",
" Run in Colab\n",
" </a>\n",
" </td>\n",
" <td>\n",
" <a href=\"https://console.cloud.google.com/vertex-ai/workbench/deploy-notebook?download_url=https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/notebooks/official/feature_store/sdk-feature-store-pandas.ipynb\">\n",
" <img src=\"https://lh3.googleusercontent.com/UiNooY4LUgW_oTvpsNhPpQzsstV5W8F7rYgxgGBD85cWJoLmrOzhVs_ksK_vgx40SHs7jCqkTkCk=e14-rj-sc0xffffff-h130-w32\" alt=\"Vertex AI logo\">\n",
" Open in Vertex AI Workbench\n",
" </a>\n",
" </td>\n",
"</table>"
]
},
@@ -62,33 +52,7 @@
"source": [
"## Overview\n",
"\n",
"This notebook introduces Pandas support for Feature Store using Vertex AI SDK. For pre-requisites and introduction on Vertex AI SDK and Feature Store native support, please go through this [Colab notebook](https://colab.sandbox.google.com/github/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/feature_store/sdk-feature-store.ipynb). "
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "DxF5JWRVT5PP"
},
"source": [
"### Objective\n",
"\n",
"In this notebook, you learn how to use `Vertex AI Feature Store` with pandas Dataframe.\n",
"\n",
"This tutorial uses the following Google Cloud ML services and resources:\n",
"\n",
"- Vertex AI Feature Store\n",
"\n",
"The steps performed include:\n",
"\n",
"- Ingest Feature values from Pandas DataFrame into Feature Store's Entity types.\n",
"- Read Entity feature values from Online Feature Store into Pandas DataFrame.\n",
"- Batch serve feature values from your Feature Store into Pandas DataFrame.\n",
"\n",
"You also learn how Vertex AI Feature Store can be useful in the below scenarios:\n",
"\n",
"- Online serving with updated feature values.\n",
"- Point-in-time correctness to fetch feature values for training."
"This Colab introduces Pandas support of Vertex AI SDK Feature Store. For pre-requisite and introduction for Vertex AI SDK Feature Store native support, please see this [Colab](https://colab.sandbox.google.com/github/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/feature_store/sdk-feature-store.ipynb). "
]
},
{
@@ -99,7 +63,27 @@
"source": [
"### Dataset\n",
"\n",
"This tutorial is a part of the Feature Store tutorial notebooks. It uses a movie recommendation dataset as an example for demonstrating various functionalities of Feature Store. The original task is to train a model to predict if a user is going to watch a movie, and serve the model online."
"This Colab uses a movie recommendation dataset as an example throughout all the sessions. The task is to train a model to predict if a user is going to watch a movie and serve this model online."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "DxF5JWRVT5PP"
},
"source": [
"### Objective\n",
"\n",
"In this notebook, you will learn how to:\n",
"\n",
" * Ingest Feature Values from Pandas DataFrame into featurestore's entity types.\n",
" * Read Entity Feature Values from Online Feature Store into Pandas DataFrame.\n",
" * Batch Serve Feature Values from your featurestore to Pandas DataFrame.\n",
"\n",
"We will also discuss how Vertex AI Feature Store can be useful in the below scenarios:\n",
"\n",
" * online serving with updated feature values\n",
" * point-in-time correctness to fetch feature values for training"
]
},
{
@@ -113,9 +97,11 @@
"This tutorial uses billable components of Google Cloud:\n",
"\n",
"* Vertex AI\n",
"* Cloud BigQuery\n",
"\n",
"Learn about [Vertex AI\n",
"pricing](https://cloud.google.com/vertex-ai/pricing) and use the [Pricing\n",
"pricing](https://cloud.google.com/vertex-ai/pricing) and [Cloud Storage\n",
"pricing](https://cloud.google.com/storage/pricing), and use the [Pricing\n",
"Calculator](https://cloud.google.com/products/calculator/)\n",
"to generate a cost estimate based on your projected usage."
]
@@ -137,7 +123,7 @@
"source": [
"### Install additional packages\n",
"\n",
"To run this notebook, you need to install the following packages for Python."
"For this Colab, you need the Vertex SDK for Python."
]
},
{
@@ -150,23 +136,41 @@
"source": [
"import os\n",
"\n",
"# The Vertex AI Workbench Notebook product has specific requirements\n",
"IS_WORKBENCH_NOTEBOOK = os.getenv(\"DL_ANACONDA_HOME\")\n",
"IS_USER_MANAGED_WORKBENCH_NOTEBOOK = os.path.exists(\n",
" \"/opt/deeplearning/metadata/env_version\"\n",
")\n",
"# The Google Cloud Notebook product has specific requirements\n",
"IS_GOOGLE_CLOUD_NOTEBOOK = os.path.exists(\"/opt/deeplearning/metadata/env_version\")\n",
"\n",
"# Vertex AI Notebook requires dependencies to be installed with '--user'\n",
"# Google Cloud Notebook requires dependencies to be installed with '--user'\n",
"USER_FLAG = \"\"\n",
"if IS_WORKBENCH_NOTEBOOK:\n",
" USER_FLAG = \"--user\"\n",
" \n",
"! pip install -U {USER_FLAG} --upgrade google-cloud-aiplatform \\\n",
" google-cloud-bigquery \\\n",
" google-cloud-bigquery-storage \\\n",
" avro \\\n",
" pyarrow \\\n",
" pandas -q"
"if IS_GOOGLE_CLOUD_NOTEBOOK:\n",
" USER_FLAG = \"--user\""
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "Kd0kgDqVZyRe"
},
"outputs": [],
"source": [
"! pip uninstall {USER_FLAG} -y google-cloud-aiplatform\n",
"! pip uninstall {USER_FLAG} -y google-cloud-bigquery\n",
"! pip uninstall {USER_FLAG} -y google-cloud-bigquery-storage\n",
"! pip uninstall {USER_FLAG} -y google-cloud-aiplatform"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "wUswAmpiN2l-"
},
"outputs": [],
"source": [
"! pip install {USER_FLAG} --upgrade google-cloud-aiplatform\n",
"! pip install {USER_FLAG} --upgrade google-cloud-bigquery\n",
"! pip install {USER_FLAG} --upgrade google-cloud-bigquery-storage\n",
"! pip install {USER_FLAG} avro"
]
},
{
@@ -177,7 +181,7 @@
"source": [
"### Restart the kernel\n",
"\n",
"After you install the packages, you need to restart the notebook kernel so that it can find the packages."
"After you install the SDK, you need to restart the notebook kernel so it can find the packages. You can restart kernel from *Kernel -> Restart Kernel*, or running the following:"
]
},
{
@@ -215,7 +219,7 @@
"\n",
"1. [Enable the Vertex AI API and Compute Engine API](https://console.cloud.google.com/flows/enableapi?apiid=aiplatform.googleapis.com,compute_component).\n",
"\n",
"1. If you are running this notebook locally, you need to install the [Cloud SDK](https://cloud.google.com/sdk).\n",
"1. If you are running this notebook locally, you will need to install the [Cloud SDK](https://cloud.google.com/sdk).\n",
"\n",
"1. Enter your project ID in the cell below. Then run the cell to make sure the\n",
"Cloud SDK uses the right project for all the commands in this notebook.\n",
@@ -234,17 +238,6 @@
"**If you don't know your project ID**, you may be able to get your project ID using `gcloud`."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "dcdfccf50581"
},
"outputs": [],
"source": [
"PROJECT_ID = \"[your-project-id]\" # @param {type:\"string\"}"
]
},
{
"cell_type": "code",
"execution_count": null,
@@ -253,56 +246,37 @@
},
"outputs": [],
"source": [
"if PROJECT_ID == \"\" or PROJECT_ID is None or PROJECT_ID == \"[your-project-id]\":\n",
" # Get your GCP project id from gcloud\n",
" shell_output = ! gcloud config list --format 'value(core.project)' 2>/dev/null\n",
"import os\n",
"\n",
"PROJECT_ID = \"\"\n",
"\n",
"# Get your Google Cloud project ID from gcloud\n",
"if not os.getenv(\"IS_TESTING\"):\n",
" shell_output = !gcloud config list --format 'value(core.project)' 2>/dev/null\n",
" PROJECT_ID = shell_output[0]\n",
" print(\"Project ID:\", PROJECT_ID)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "09021c90b34c"
},
"outputs": [],
"source": [
"! gcloud config set project $PROJECT_ID"
" print(\"Project ID: \", PROJECT_ID)"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "f41eda68c379"
"id": "qJYoRfYng0XZ"
},
"source": [
"#### Region\n",
"\n",
"You can also change the `REGION` variable, which is used for operations\n",
"throughout the rest of this notebook. Below are regions supported for Vertex AI. It is recommended that you choose the region closest to you.\n",
"\n",
"- Americas: `us-central1`\n",
"- Europe: `europe-west4`\n",
"- Asia Pacific: `asia-east1`\n",
"\n",
"You may not use a multi-regional bucket for training with Vertex AI. Not all regions provide support for all Vertex AI services.\n",
"\n",
"Learn more about [Vertex AI regions](https://cloud.google.com/vertex-ai/docs/general/locations)."
"Otherwise, set your project ID here."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "5c615e53149f"
"id": "riG_qUokg0XZ"
},
"outputs": [],
"source": [
"REGION = \"[your-region]\" # @param {type: \"string\"}\n",
"\n",
"if REGION == \"[your-region]\":\n",
" REGION = \"us-central1\""
"if PROJECT_ID == \"\" or PROJECT_ID is None:\n",
" PROJECT_ID = \"\" # @param {type:\"string\"}\n",
"print(\"Project ID: \", PROJECT_ID)"
]
},
{
@@ -311,29 +285,10 @@
"id": "dr--iN2kAylZ"
},
"source": [
"#### UUID\n",
"### Authenticate your Google Cloud account\n",
"\n",
"If you are in a live tutorial session, you might be using a shared test account or project. To avoid name collisions between users on resources created, you create a uuid for each instance session, and append it onto the name of resources you create in this tutorial."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "4e166d927e36"
},
"outputs": [],
"source": [
"import random\n",
"import string\n",
"\n",
"\n",
"# Generate a uuid of a specifed length(default=8)\n",
"def generate_uuid(length: int = 8) -> str:\n",
" return \"\".join(random.choices(string.ascii_lowercase + string.digits, k=length))\n",
"\n",
"\n",
"UUID = generate_uuid()"
"**If you are using Google Cloud Notebooks**, your environment is already\n",
"authenticated. Skip this step."
]
},
{
@@ -342,11 +297,6 @@
"id": "sBCra4QMA2wR"
},
"source": [
"### Authenticate your Google Cloud account\n",
"\n",
"**If you are using Vertex AI Workbench Notebooks**, your environment is already\n",
"authenticated. \n",
"\n",
"**If you are using Colab**, run the cell below and follow the instructions\n",
"when prompted to authenticate your account via oAuth.\n",
"\n",
@@ -364,7 +314,7 @@
"into the filter box, and select\n",
" **Vertex AI Administrator**. Type \"Storage Object Admin\" into the filter box, and select **Storage Object Admin**.\n",
"\n",
"5. Click *Create*. A JSON file that contains your key downloads to your\n",
"5. Click **Create**. A JSON file that contains your key downloads to your\n",
"local environment.\n",
"\n",
"6. Enter the path to your service account key as the\n",
@@ -379,19 +329,19 @@
},
"outputs": [],
"source": [
"import os\n",
"import sys\n",
"\n",
"# If you are running this notebook in Colab, run this cell and follow the\n",
"# instructions to authenticate your GCP account. This provides access to your\n",
"# Cloud Storage bucket and lets you submit training jobs and prediction\n",
"# requests.\n",
"\n",
"import os\n",
"import sys\n",
"# The Google Cloud Notebook product has specific requirements\n",
"IS_GOOGLE_CLOUD_NOTEBOOK = os.path.exists(\"/opt/deeplearning/metadata/env_version\")\n",
"\n",
"# If on Vertex AI Workbench, then don't execute this code\n",
"IS_COLAB = \"google.colab\" in sys.modules\n",
"if not os.path.exists(\"/opt/deeplearning/metadata/env_version\") and not os.getenv(\n",
" \"DL_ANACONDA_HOME\"\n",
"):\n",
"# If on Google Cloud Notebooks, then don't execute this code\n",
"if not IS_GOOGLE_CLOUD_NOTEBOOK:\n",
" if \"google.colab\" in sys.modules:\n",
" from google.colab import auth as google_auth\n",
"\n",
@@ -401,7 +351,7 @@
" # path to your service account key and run this cell to authenticate your GCP\n",
" # account.\n",
" elif not os.getenv(\"IS_TESTING\"):\n",
" %env GOOGLE_APPLICATION_CREDENTIALS '[your-service-account-key-path]'"
" %env GOOGLE_APPLICATION_CREDENTIALS ''"
]
},
{
@@ -410,7 +360,7 @@
"id": "XoEqT2Y4DJmf"
},
"source": [
"### Import libraries"
"### Import libraries and define constants"
]
},
{
@@ -424,31 +374,20 @@
"import datetime\n",
"\n",
"import pandas as pd\n",
"from avro.datafile import DataFileReader\n",
"from avro.io import DatumReader\n",
"from google.cloud import aiplatform"
"from google.cloud import aiplatform\n",
"\n",
"REGION = \"\" # @param {type:\"string\"}\n",
"\n",
"aiplatform.init(project=PROJECT_ID, location=REGION)"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "138407556b22"
"id": "9UvxYyGUimKw"
},
"source": [
"### Initialize Vertex AI SDK for Python\n",
"\n",
"Initialize the Vertex AI SDK for Python for your project and region."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "8d2077ffee78"
},
"outputs": [],
"source": [
"aiplatform.init(project=PROJECT_ID, location=REGION)"
"## Create Feature Store Resources"
]
},
{
@@ -457,12 +396,11 @@
"id": "buQBIv3ZL3A0"
},
"source": [
"## Create a Feature Store\n",
"### Create Featurestore\n",
"\n",
"The method to create a Feature Store in Vertex AI returns a\n",
"[long-running operation](https://google.aip.dev/151) (LRO). An LRO starts an asynchronous job. LROs are returned for other API methods too, such as updating or deleting a featurestore. \n",
"\n",
"Running the code cell below creates a featurestore and prints the process' logs."
"The method to create a Featurestore returns a\n",
"[long-running operation](https://google.aip.dev/151) (LRO). An LRO starts an asynchronous job. LROs are returned for other API\n",
"methods too, such as updating or deleting a featurestore. Running the code cell will create a featurestore and print the process log."
]
},
{
@@ -473,9 +411,9 @@
},
"outputs": [],
"source": [
"# Create featurestore\n",
"movie_predictions_feature_store = aiplatform.Featurestore.create(\n",
" featurestore_id=f\"movie_predictions_{UUID}\", online_store_fixed_node_count=1\n",
" featurestore_id=\"movie_predictions\",\n",
" online_store_fixed_node_count=1,\n",
")"
]
},
@@ -485,9 +423,9 @@
"id": "EpmJq75zXjmT"
},
"source": [
"## Create Entity types\n",
"### Create Entity Types\n",
"\n",
"Entity types can be created within the Featurestore class. Below, you create the `Users` entity type and `Movies` entity type. Process logs are printed in the output for each cell."
"Entity types can be created within the Featurestore class. Below, create the Users entity type and Movies entity type. A process log will be printed out."
]
},
{
@@ -498,7 +436,6 @@
},
"outputs": [],
"source": [
"# Create users entity type\n",
"users_entity_type = movie_predictions_feature_store.create_entity_type(\n",
" entity_type_id=\"users\",\n",
" description=\"Users entity\",\n",
@@ -513,7 +450,6 @@
},
"outputs": [],
"source": [
"# Create movies entity type\n",
"movies_entity_type = movie_predictions_feature_store.create_entity_type(\n",
" entity_type_id=\"movies\",\n",
" description=\"Movies entity\",\n",
@@ -526,11 +462,8 @@
"id": "FJW4q-0jO2Xf"
},
"source": [
"## Create Features\n",
"Features can be created within each entity type. Add defined features to the `Users` entity type and `Movies` entity type by using the following methods.\n",
"\n",
"### Add features using *create_feature* method\n",
"Provide the feature information like id, type and description to the `create_feature` method of entity type."
"### Create Features\n",
"Features can be created within each entity type. Add defining features to the Users entity type and Movies entity type by using the following methods."
]
},
{
@@ -541,21 +474,18 @@
},
"outputs": [],
"source": [
"# Create age feature\n",
"users_feature_age = users_entity_type.create_feature(\n",
" feature_id=\"age\",\n",
" value_type=\"INT64\",\n",
" description=\"User age\",\n",
")\n",
"\n",
"# Create gender feature\n",
"users_feature_gender = users_entity_type.create_feature(\n",
" feature_id=\"gender\",\n",
" value_type=\"STRING\",\n",
" description=\"User gender\",\n",
")\n",
"\n",
"# Create liked_genres feature\n",
"users_feature_liked_genres = users_entity_type.create_feature(\n",
" feature_id=\"liked_genres\",\n",
" value_type=\"STRING_ARRAY\",\n",
@@ -563,18 +493,6 @@
")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "ecb141839033"
},
"source": [
"### Add features using batch method\n",
"You can also create features using a config map in a dictionary format and the `batch_create_features` method. This way, you can add multiple features at once. \n",
"\n",
"Below, you define and create *title*, *genres* and *average_rating* features using the batch method."
]
},
{
"cell_type": "code",
"execution_count": null,
@@ -596,8 +514,17 @@
" \"value_type\": \"DOUBLE\",\n",
" \"description\": \"The average rating for the movie, range is [1.0-5.0]\",\n",
" },\n",
"}\n",
"\n",
"}"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "YhfOKJL_BvuM"
},
"outputs": [],
"source": [
"movie_features = movies_entity_type.batch_create_features(\n",
" feature_configs=movies_feature_configs,\n",
")"
@@ -609,15 +536,18 @@
"id": "K3n5XdK8Xjmw"
},
"source": [
"## Ingest Feature values into Entity types from dataframes\n",
"## Ingest Feature Values into Entity Type from a Pandas DataFrame\n",
"\n",
"You need to ingest feature values into your entity type containing the features. It is so that you can later `read` (online) or `batch serve` (offline) the feature values from the entity type. \n",
"\n",
"In this step, you learn how to ingest feature values from a Pandas dataframe into an entity type. You can also import feature values from BigQuery or Google Cloud Storage.\n",
"\n",
"### Get data from source\n",
"\n",
"Define the public data sources for users and movies and copy them locally into *avro* files."
"You need to ingest feature values into your entity type containing the features, so you can later `read` (online) or `batch serve` (offline) the feature values from the entity type. In this step, you will learn how to ingest feature values from a Pandas DataFrame into an entity type. We can also import feature values from BigQuery or Google Cloud Storage.\n"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "BlqJ-QdTcs6W"
},
"source": [
"#### Entity Type Source Files"
]
},
{
@@ -636,8 +566,17 @@
")\n",
"\n",
"USERS_AVRO_FN = \"users.avro\"\n",
"MOVIES_AVRO_FN = \"movies.avro\"\n",
"\n",
"MOVIES_AVRO_FN = \"movies.avro\""
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "KqIH_bS-5OW5"
},
"outputs": [],
"source": [
"! gsutil cp $GCS_USERS_AVRO_URI $USERS_AVRO_FN\n",
"! gsutil cp $GCS_MOVIES_AVRO_URI $MOVIES_AVRO_FN"
]
@@ -648,9 +587,7 @@
"id": "Fd6Z0jfR5OW5"
},
"source": [
"### Load data from avro files \n",
"\n",
"Load users and movies data from avro files into Pandas dataframes."
"#### Load Avro Files into Pandas DataFrames"
]
},
{
@@ -661,7 +598,10 @@
},
"outputs": [],
"source": [
"# Define a class for reading the avro data\n",
"from avro.datafile import DataFileReader\n",
"from avro.io import DatumReader\n",
"\n",
"\n",
"class AvroReader:\n",
" def __init__(self, data_file):\n",
" self.avro_reader = DataFileReader(open(data_file, \"rb\"), DatumReader())\n",
@@ -679,7 +619,6 @@
},
"outputs": [],
"source": [
"# Load users data from avro file\n",
"users_avro_reader = AvroReader(data_file=USERS_AVRO_FN)\n",
"users_source_df = users_avro_reader.to_dataframe()\n",
"print(users_source_df)"
@@ -693,7 +632,6 @@
},
"outputs": [],
"source": [
"# Load movies data from avro file\n",
"movies_avro_reader = AvroReader(data_file=MOVIES_AVRO_FN)\n",
"movies_source_df = movies_avro_reader.to_dataframe()\n",
"print(movies_source_df)"
@@ -705,9 +643,7 @@
"id": "bgb0WGwX5OW6"
},
"source": [
"### Ingest Feature values into Entity types\n",
"\n",
"Load the feature values into `users` entity type providing the id fields and time field."
"#### Ingest Feature Values into Users Entity Type"
]
},
{
@@ -732,7 +668,7 @@
"id": "PCAdQ3cF5OW6"
},
"source": [
"Load the feature values into `movie` entity type providing the id fields and time field."
"#### Ingest Feature Values into Movies Entity Type"
]
},
{
@@ -757,12 +693,10 @@
"id": "pIYLZwao5OW6"
},
"source": [
"## Read/serve Entity's feature values online from Feature Store\n",
"## Read/Online Serve Entity's Feature Values from Vertex AI Online Feature Store\n",
"\n",
"Feature Store allows [online serving](https://cloud.google.com/vertex-ai/docs/featurestore/serving-online)\n",
"which lets you read feature values for small batches of entities. It works well when you want to read values of selected features from an entity or multiple entities in an entity type.\n",
"\n",
"### Read feature values for users"
"which lets you read feature values for small batches of entities. It works well when you want to read values of selected features from an entity or multiple entities in an entity type."
]
},
{
@@ -779,15 +713,6 @@
"print(users_read_df)"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "b2cfa09ef11d"
},
"source": [
"### Read feature values for movies"
]
},
{
"cell_type": "code",
"execution_count": null,
@@ -809,13 +734,18 @@
"id": "AK2Glzkq5OW7"
},
"source": [
"## Batch serve feature values from Feature Store\n",
"## Batch Serve Featurestore's Feature Values from Vertex AI Feature Store\n",
"\n",
"Batch Serving is used to fetch a large batch of feature values for high-throughput, and is typically used for training a model or batch prediction. In this section, you learn how to prepare training examples by using the Feature Store's batch serve function.\n",
"\n",
"### Read instances from source file\n",
"\n",
"Define the source file and destination file. "
"Batch Serving is used to fetch a large batch of feature values for high-throughput, and is typically used for training a model or batch prediction. In this section, you will learn how to prepare for training examples by using the Featurestore's batch serve function."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "hxsotHUe5OW7"
},
"source": [
"#### Read Instances Source File"
]
},
{
@@ -826,17 +756,7 @@
},
"outputs": [],
"source": [
"GCS_READ_INSTANCES_CSV_URI = \"gs://cloud-samples-data-us-central1/vertex-ai/feature-store/datasets/movie_prediction.csv\"\n",
"READ_INSTANCES_CSV_FN = \"data.csv\""
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "3f2c558b649f"
},
"source": [
"Copy the instances from the source file to the destination file locally."
"GCS_READ_INSTANCES_CSV_URI = \"gs://cloud-samples-data-us-central1/vertex-ai/feature-store/datasets/movie_prediction.csv\""
]
},
{
@@ -856,9 +776,7 @@
"id": "T5DW1MFt5OW7"
},
"source": [
"### Load the instances\n",
"\n",
"Load the instances from CSV file into a Pandas dataframe."
"#### Load Csv File into a Pandas DataFrame"
]
},
{
@@ -869,7 +787,7 @@
},
"outputs": [],
"source": [
"read_instances_df = pd.read_csv(READ_INSTANCES_CSV_FN)\n",
"read_instances_df = pd.read_csv(read_instances_csv_fn)\n",
"print(read_instances_df)"
]
},
@@ -879,9 +797,7 @@
"id": "LsgNNH8G5OW8"
},
"source": [
"### Change the data type\n",
"\n",
"Change the data type of the timestamp field from `Timestamp` to `Datetime64`."
"#### Change the Dtype of `Timestamp` to `Datetime64`"
]
},
{
@@ -903,9 +819,7 @@
"id": "ao1dC5Pc5OW8"
},
"source": [
"### Batch serve feature values from Feature Store\n",
"\n",
"Serve the batch response to a dataframe and display the data."
"#### Batch Serve Feature Values from Movie Predictions Featurestore"
]
},
{
@@ -926,21 +840,42 @@
"movie_predictions_df"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "29gLNORP5OW8"
},
"source": [
"## Read the Updated Feature Values"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "XN84znoI5OW8"
},
"source": [
"## Read the latest feature values\n",
"\n",
"In Feature Store, you access the latest or the last available feature values unless a specific time is provided. Now, you test this feature by ingesting new data to the entity types and reading it from the Feature Store.\n",
"\n",
"### Ingest updated feature values\n",
"\n",
"Now, you update the feature values by running the following cell. \n",
"\n",
"**Note:** For comparison, you can try printing the feature values read from the entity types earlier (those in `movies_read_df` variable). "
"#### Recall Read from the Entity Type Shows Feature Values from the Last Ingestion"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "wtmshq_n5OW9"
},
"outputs": [],
"source": [
"print(movies_read_df)"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "feTUJjqG5OW9"
},
"source": [
"#### Ingest Updated Feature Values"
]
},
{
@@ -951,13 +886,21 @@
},
"outputs": [],
"source": [
"# Create a dataframe for the new data\n",
"update_movies_df = pd.DataFrame(\n",
" data=[[\"movie_03\", 4.3], [\"movie_04\", 4.8]],\n",
" columns=[\"movie_id\", \"average_rating\"],\n",
")\n",
"\n",
"# Ingest the new data from the dataframe\n",
"print(update_movies_df)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "aKKhSzUc5OW9"
},
"outputs": [],
"source": [
"movies_entity_type.ingest_from_df(\n",
" feature_ids=[\"average_rating\"],\n",
" feature_time=datetime.datetime.now(),\n",
@@ -972,9 +915,7 @@
"id": "s47WCIvL5OW9"
},
"source": [
"### Fetch the latest feature values\n",
"\n",
"Reading from the entity type gives you the updated feature values from the latest ingestion."
"#### Read from the Entity Type Shows Updated Feature Values from the Latest Ingestion"
]
},
{
@@ -992,18 +933,22 @@
"print(update_movies_read_df)"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "wsvCRzn_5OW9"
},
"source": [
"## Point-in-Time Correctness"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "R1YGRNsW5OW9"
},
"source": [
"## Point-in-time correctness\n",
"\n",
"Vertex AI Feature Store captures feature values for a feature at a specific point in time. In case there are missing values in your past data, you can backfill them using batch serving.\n",
"\n",
"### Missing data\n",
"Recall that response from the batch serve from last ingestion has some missing data in it."
"#### Recall Batch Serve From the Last Ingestion Has Missing Data"
]
},
{
@@ -1014,7 +959,6 @@
},
"outputs": [],
"source": [
"# Print the response\n",
"print(movie_predictions_df)"
]
},
@@ -1024,9 +968,7 @@
"id": "abQRF6mx5OW-"
},
"source": [
"### Backfill/correct point-in-time data\n",
"\n",
"Impute the missing data based on the timestamps."
"#### Backfill/Correct Point-in-Time Data"
]
},
{
@@ -1037,7 +979,6 @@
},
"outputs": [],
"source": [
"# Impute the users data\n",
"backfill_users_df = pd.DataFrame(\n",
" data=[[\"bob\", 34, \"Male\", [\"Drama\"], \"2020-02-13 09:35:15\"]],\n",
" columns=[\"user_id\", \"age\", \"gender\", \"liked_genres\", \"update_time\"],\n",
@@ -1054,7 +995,6 @@
},
"outputs": [],
"source": [
"# Impute the movies data\n",
"backfill_movies_df = pd.DataFrame(\n",
" data=[[\"movie_04\", 4.2, \"The Dark Knight\", \"Action\", \"2020-02-13 09:35:15\"]],\n",
" columns=[\"movie_id\", \"average_rating\", \"title\", \"genres\", \"update_time\"],\n",
@@ -1069,9 +1009,7 @@
"id": "WXb4JUhu5OW-"
},
"source": [
"### Ingest the backfilled/corrected data\n",
"\n",
"Ingest the imputed point-in-time data from dataframe to the entity types in feature store."
"#### Ingest Backfill/Correct Point-in-Time Data"
]
},
{
@@ -1082,7 +1020,6 @@
},
"outputs": [],
"source": [
"# Ingest the users data\n",
"users_entity_type.ingest_from_df(\n",
" feature_ids=[\"age\", \"gender\", \"liked_genres\"],\n",
" feature_time=\"update_time\",\n",
@@ -1099,7 +1036,6 @@
},
"outputs": [],
"source": [
"# Ingest the users data\n",
"movies_entity_type.ingest_from_df(\n",
" feature_ids=[\"average_rating\", \"title\", \"genres\"],\n",
" feature_time=\"update_time\",\n",
@@ -1114,8 +1050,7 @@
"id": "1e62Ku6W5OW_"
},
"source": [
"### Fetch the latest data\n",
"Batch serve the latest ingested data with backfill/correction to a dataframe to ensure the feature store is updated. "
"#### Batch Serve From the Latest Ingestion with Backfill/Correction Has Reduced Missing Data"
]
},
{
@@ -1147,7 +1082,7 @@
"To clean up all Google Cloud resources used in this project, you can [delete the Google Cloud\n",
"project](https://cloud.google.com/resource-manager/docs/creating-managing-projects#shutting_down_projects) you used for the tutorial.\n",
"\n",
"Otherwise, you can delete the individual resources you created in this tutorial:"
"You can also keep the project but delete the featurestore by running the code below:"
]
},
{
@@ -1158,7 +1093,6 @@
},
"outputs": [],
"source": [
"# Delete the feature store\n",
"movie_predictions_feature_store.delete(force=True)"
]
}

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@@ -1,55 +1,29 @@
{
"cells": [
{
"cell_type": "code",
"execution_count": null,
"cell_type": "markdown",
"metadata": {
"id": "503077811e70"
},
"outputs": [],
"source": [
"# Copyright 2022 Google LLC\n",
"#\n",
"# Licensed under the Apache License, Version 2.0 (the \"License\");\n",
"# you may not use this file except in compliance with the License.\n",
"# You may obtain a copy of the License at\n",
"#\n",
"# https://www.apache.org/licenses/LICENSE-2.0\n",
"#\n",
"# Unless required by applicable law or agreed to in writing, software\n",
"# distributed under the License is distributed on an \"AS IS\" BASIS,\n",
"# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n",
"# See the License for the specific language governing permissions and\n",
"# limitations under the License."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "e885ac09bc73"
},
"source": [
"# Train a multi-class classification model for ads-targeting\n",
"<table align=\"left\">\n",
"\n",
" <td>\n",
" <a href=\"https://colab.research.google.com/github/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/official/workbench/ads_targetting/training-multi-class-classification-model-for-ads-targeting-usecase.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/colab-logo-32px.png\" alt=\"Colab logo\"> Run in Colab\n",
" </a>\n",
" </td>\n",
" <td>\n",
" <a href=\"https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/official/workbench/ads_targetting/training-multi-class-classification-model-for-ads-targeting-usecase.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/github-logo-32px.png\" alt=\"GitHub logo\">\n",
" View on GitHub\n",
" </a>\n",
" </td>\n",
" <td>\n",
"<a href=\"https://console.cloud.google.com/vertex-ai/workbench/deploy-notebook?download_url=https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/notebooks/official/workbench/ads_targetting/training-multi-class-classification-model-for-ads-targeting-usecase.ipynb\" target='_blank'>\n",
" <img src=\"https://lh3.googleusercontent.com/UiNooY4LUgW_oTvpsNhPpQzsstV5W8F7rYgxgGBD85cWJoLmrOzhVs_ksK_vgx40SHs7jCqkTkCk=e14-rj-sc0xffffff-h130-w32\" alt=\"Vertex AI logo\">\n",
" Open in Vertex AI Workbench\n",
" </a>\n",
" </td> \n",
"</table>"
"## Table of contents\n",
"\n",
"* [Overview](#section-1)\n",
"* [Dataset](#section-2)\n",
"* [Objective](#section-3)\n",
"* [Costs](#section-4)\n",
"* [Tutorial](#section-5)\n",
"\t- [Fetch the data from BigQuery](#section-5)\n",
" - [Preprocess the data](#section-6)\n",
" - [Train a TensorFlow model](#section-7)\n",
" - [Run the model on test data](#section-8)\n",
" - [Automating the execution of the notebook using executor](#section-9)\n",
" - [Scheduled runs on executor](#section-10)\n",
" - [Parameterizing the variables](#section-11)\n",
"* [Save the model to a Cloud Storage path](#section-12)\n",
"* [Clean up](#section-13)\n"
]
},
{
@@ -59,27 +33,25 @@
},
"source": [
"## Overview\n",
"<a name=\"section-1\"></a>\n",
"\n",
"This tutorial demonstrates how to build a machine learning model for an ads-targeting use case. Ads-targeting is an advertisement technique where chosen or tailor-made ads are shown to the customers based on their past behavior and preferences. Targeted ads are meant to reach specific customers based on demographics, psychographics, behavior, and other second-order activities that are learned usually through data collected from the customers.\n",
"\n",
"*Note: If you are using [Vertex AI Workbench managed notebooks](https://cloud.google.com/vertex-ai/docs/workbench/managed/create-instance) instance use the `TensorFlow 2 (Local)` kernel. Some components of this notebook may not work in other notebook environments.*\n"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "1bea2b6e9b25"
},
"source": [
"### Objective\n",
"*Note: This notebook file was designed to run in a [Vertex AI Workbench managed notebooks](https://cloud.google.com/vertex-ai/docs/workbench/managed/create-instance) instance using the `TensorFlow 2 (Local)` kernel. Some components of this notebook may not work in other notebook environments.*\n",
"\n",
"In this tutorial, you learn how to collect data from BigQuery, preprocess it, and train a multi-class classification model on an e-commerce dataset. \n",
"## Dataset\n",
"<a name=\"section-2\"></a>\n",
"\n",
"This tutorial uses the following Google Cloud ML services and resources:\n",
"This tutorial uses the `looker-private-demo.ecomm` dataset in BigQuery. The dataset consists of information about various advertisement campaigns including the demographics of users who have clicked and made some purchases after seeing the ads. For this tutorial, the top three campaigns from the USA are selected from this dataset and user information for those who have made purchases shall be used to train a model with the campaigns as the classes. The idea is to see if the advertisement and the user data can be used to identify which campaign is best-suited for the user.\n",
"\n",
"- BigQuery\n",
"The dataset can be accessed by pinning the `looker-private-demo` project in BigQuery. Instead of going to the BigQuery user interface, this process can be performed from the JupyterLab user interface on a Vertex AI Workbench managed notebooks instance. Vertex AI Workbench managed notebooks instances support browsing through the datasets and tables from BigQuery through its BigQuery integration. \n",
"\n",
"The steps performed include:\n",
"<img src=\"images/Bigquery_UI_new.PNG\"></img>\n",
"\n",
"## Objective\n",
"<a name=\"section-3\"></a>\n",
"\n",
"This tutorial demonstrates how to collect data from BigQuery, preprocess it, and train a multi-class classification model on an E-commerce dataset. The steps performed include the following:\n",
"\n",
"- Fetch the required data from BigQuery\n",
"- Preprocess the data\n",
@@ -87,31 +59,10 @@
"- Evaluate the loss for the trained model\n",
"- Automate the notebook execution using the executor feature\n",
"- Save the model to a Cloud Storage path\n",
"- Clean up the created resources"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "34d623e6dfa3"
},
"source": [
"## Dataset\n",
"- Clean up the created resources\n",
"\n",
"This tutorial uses the `looker-private-demo.ecomm` dataset in BigQuery. The dataset consists of information about various advertisement campaigns including the demographics of users who have clicked and made some purchases after seeing the ads. For this tutorial, the top three campaigns from the USA are selected from this dataset and user information for those who have made purchases shall be used to train a model with the campaigns as the classes. The idea is to see if the advertisement and the user data can be used to identify which campaign is best-suited for the user.\n",
"\n",
"The dataset can be accessed by pinning the `looker-private-demo` project in BigQuery. If you are using Vertex AI Workbench managed notebooks instance, instead of going to the BigQuery user interface, this process can be performed from the JupyterLab user interface. Vertex AI Workbench managed notebooks instances support browsing through the datasets and tables from BigQuery through its BigQuery integration. \n",
"\n",
"<img src=\"images/Bigquery_UI_new.PNG\"></img>"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "ee02650bb7fd"
},
"source": [
"### Costs \n",
"<a name=\"section-4\"></a>\n",
"\n",
"This tutorial uses billable components of Google Cloud:\n",
"\n",
@@ -127,144 +78,6 @@
"to generate a cost estimate based on your projected usage."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "y320EIk-kXT7"
},
"source": [
"### Set up your local development environment\n",
"\n",
"**If you are using Colab or Vertex AI Workbench Notebooks**, your environment already meets\n",
"all the requirements to run this notebook. You can skip this step.\n",
"\n",
"**Otherwise**, make sure your environment meets this notebook's requirements.\n",
"You need the following:\n",
"\n",
"* The Google Cloud SDK\n",
"* Git\n",
"* Python 3\n",
"* virtualenv\n",
"* Jupyter notebook running in a virtual environment with Python 3\n",
"\n",
"The Google Cloud guide to [Setting up a Python development\n",
"environment](https://cloud.google.com/python/setup) and the [Jupyter\n",
"installation guide](https://jupyter.org/install) provide detailed instructions\n",
"for meeting these requirements. The following steps provide a condensed set of\n",
"instructions:\n",
"\n",
"1. [Install and initialize the Cloud SDK.](https://cloud.google.com/sdk/docs/)\n",
"\n",
"1. [Install Python 3.](https://cloud.google.com/python/setup#installing_python)\n",
"\n",
"1. [Install\n",
" virtualenv](https://cloud.google.com/python/setup#installing_and_using_virtualenv)\n",
" and create a virtual environment that uses Python 3. Activate the virtual environment.\n",
"\n",
"1. To install Jupyter, run `pip3 install jupyter` on the\n",
"command-line in a terminal shell.\n",
"\n",
"1. To launch Jupyter, run `jupyter notebook` on the command-line in a terminal shell.\n",
"\n",
"1. Open this notebook in the Jupyter Notebook Dashboard."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "1DouUvNOkXT8"
},
"source": [
"### Install additional packages\n"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "Ayt1jhFXkXT9"
},
"outputs": [],
"source": [
"import os\n",
"\n",
"# The Vertex AI Workbench Notebook product has specific requirements\n",
"IS_WORKBENCH_NOTEBOOK = os.getenv(\"DL_ANACONDA_HOME\")\n",
"IS_USER_MANAGED_WORKBENCH_NOTEBOOK = os.path.exists(\n",
" \"/opt/deeplearning/metadata/env_version\"\n",
")\n",
"\n",
"# Vertex AI Notebook requires dependencies to be installed with '--user'\n",
"USER_FLAG = \"\"\n",
"if IS_WORKBENCH_NOTEBOOK:\n",
" USER_FLAG = \"--user\"\n",
"\n",
"! pip3 install {USER_FLAG} --upgrade pandas-gbq 'google-cloud-bigquery[bqstorage,pandas]' tensorflow scikit-learn protobuf==3.20.3 -q"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "aNeMRbpukXUA"
},
"source": [
"### Restart the kernel\n",
"\n",
"After you install the additional packages, you need to restart the notebook kernel so it can find the packages."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "dJ_yvi_9kXUB"
},
"outputs": [],
"source": [
"# Automatically restart kernel after installs\n",
"import os\n",
"\n",
"if not os.getenv(\"IS_TESTING\"):\n",
" # Automatically restart kernel after installs\n",
" import IPython\n",
"\n",
" app = IPython.Application.instance()\n",
" app.kernel.do_shutdown(True)"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "a47846030fef"
},
"source": [
"## Before you begin"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "71b29797836c"
},
"source": [
"### Set up your Google Cloud project\n",
"\n",
"**The following steps are required, regardless of your notebook environment.**\n",
"\n",
"1. <a href=\"https://console.cloud.google.com/cloud-resource-manager\" target=\"_blank\">Select or create a Google Cloud project</a>. When you first create an account, you get a $300 free credit towards your compute/storage costs.\n",
"\n",
"1. <a href=\"https://cloud.google.com/billing/docs/how-to/modify-project\" target=\"_blank\">Make sure that billing is enabled for your project</a>.\n",
"\n",
"1. <a href=\"https://console.cloud.google.com/flows/enableapi?apiid=aiplatform.googleapis.com\" target=\"_blank\">Enable the Vertex AI API</a>.\n",
"\n",
"1. If you are running this notebook locally, you will need to install the <a href=\"https://cloud.google.com/sdk\" target=\"_blank\">Cloud SDK</a>.\n",
"\n",
"1. Enter your project ID in the cell below. Then run the cell to make sure the\n",
"Cloud SDK uses the right project for all the commands in this notebook.\n",
"\n",
"**Note**: Jupyter runs lines prefixed with `!` as shell commands, and it interpolates Python variables prefixed with `$` into these commands."
]
},
{
"cell_type": "markdown",
"metadata": {
@@ -276,32 +89,6 @@
"**If you don't know your project ID**, you may be able to get your project ID using `gcloud`."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "3c8049930470"
},
"outputs": [],
"source": [
"PROJECT_ID = \"[your-project-id]\" # @param {type:\"string\"}"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "a36c4b991a39"
},
"outputs": [],
"source": [
"if PROJECT_ID == \"\" or PROJECT_ID is None or PROJECT_ID == \"[your-project-id]\":\n",
" # Get your GCP project id from gcloud\n",
" shell_output = ! gcloud config list --format 'value(core.project)' 2>/dev/null\n",
" PROJECT_ID = shell_output[0]\n",
" print(\"Project ID:\", PROJECT_ID)"
]
},
{
"cell_type": "code",
"execution_count": null,
@@ -310,41 +97,34 @@
},
"outputs": [],
"source": [
"! gcloud config set project $PROJECT_ID"
"PROJECT_ID = \"\"\n",
"\n",
"# Get your Google Cloud project ID from gcloud\n",
"if not os.getenv(\"IS_TESTING\"):\n",
" shell_output=!gcloud config list --format 'value(core.project)' 2>/dev/null\n",
" PROJECT_ID = shell_output[0]\n",
" print(\"Project ID: \", PROJECT_ID)"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "03d8d65b914d"
"id": "d0058f55f8cf"
},
"source": [
"#### Region\n",
"\n",
"You can also change the `REGION` variable, which is used for operations\n",
"throughout the rest of this notebook. Below are regions supported for Vertex AI. We recommend that you choose the region closest to you.\n",
"\n",
"- Americas: `us-central1`\n",
"- Europe: `europe-west4`\n",
"- Asia Pacific: `asia-east1`\n",
"\n",
"You may not use a multi-regional bucket for training with Vertex AI. Not all regions provide support for all Vertex AI services.\n",
"\n",
"Learn more about [Vertex AI regions](https://cloud.google.com/vertex-ai/docs/general/locations)."
"Otherwise, set your project ID here."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "3281bedf6d3c"
"id": "19579640c063"
},
"outputs": [],
"source": [
"REGION = \"us-central1\" # @param {type: \"string\"}\n",
"\n",
"if REGION == \"[your-region]\":\n",
" REGION = \"us-central1\""
"if PROJECT_ID == \"\" or PROJECT_ID is None:\n",
" PROJECT_ID = \"[your-project-id]\" # @param {type:\"string\"}"
]
},
{
@@ -353,9 +133,9 @@
"id": "b2b04f364669"
},
"source": [
"#### UUID\n",
"#### Timestamp\n",
"\n",
"If you are in a live tutorial session, you might be using a shared test account or project. To avoid name collisions between users on resources created, you create a UUID for each instance session, and append it onto the name of resources you create in this tutorial."
"If you are in a live tutorial session, you might be using a shared test account or project. To avoid name collisions between users on resources created, you create a timestamp for each instance session, and append it onto the name of resources you create in this tutorial."
]
},
{
@@ -366,84 +146,9 @@
},
"outputs": [],
"source": [
"import random\n",
"import string\n",
"from datetime import datetime\n",
"\n",
"\n",
"# Generate a uuid of a specifed length(default=8)\n",
"def generate_uuid(length: int = 8) -> str:\n",
" return \"\".join(random.choices(string.ascii_lowercase + string.digits, k=length))\n",
"\n",
"\n",
"UUID = generate_uuid()"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "OoPGk5KOkXUG"
},
"source": [
"### Authenticate your Google Cloud account\n",
"\n",
"**If you are using Vertex AI Workbench Notebooks**, your environment is already\n",
"authenticated. Skip this step.\n",
"\n",
"**If you are using Colab**, run the cell below and follow the instructions\n",
"when prompted to authenticate your account via oAuth.\n",
"\n",
"**Otherwise**, follow these steps:\n",
"\n",
"1. In the Cloud Console, go to the [**Create service account key**\n",
" page](https://console.cloud.google.com/apis/credentials/serviceaccountkey).\n",
"\n",
"2. Click **Create service account**.\n",
"\n",
"3. In the **Service account name** field, enter a name, and\n",
" click **Create**.\n",
"\n",
"4. In the **Grant this service account access to project** section, click the **Role** drop-down list. Type \"Vertex AI\"\n",
"into the filter box, and select\n",
" **Vertex AI Administrator**. Type \"Storage Object Admin\" into the filter box, and select **Storage Object Admin**.\n",
"\n",
"5. Click *Create*. A JSON file that contains your key downloads to your\n",
"local environment.\n",
"\n",
"6. Enter the path to your service account key as the\n",
"`GOOGLE_APPLICATION_CREDENTIALS` variable in the cell below and run the cell."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "Teyy6LGqkXUG"
},
"outputs": [],
"source": [
"# If you are running this notebook in Colab, run this cell and follow the\n",
"# instructions to authenticate your GCP account. This provides access to your\n",
"# Cloud Storage bucket and lets you submit training jobs and prediction\n",
"# requests.\n",
"\n",
"import os\n",
"import sys\n",
"\n",
"# If on Vertex AI Workbench, then don't execute this code\n",
"IS_COLAB = \"google.colab\" in sys.modules\n",
"if not os.path.exists(\"/opt/deeplearning/metadata/env_version\") and not os.getenv(\n",
" \"DL_ANACONDA_HOME\"\n",
"):\n",
" if \"google.colab\" in sys.modules:\n",
" from google.colab import auth as google_auth\n",
"\n",
" google_auth.authenticate_user()\n",
"\n",
" # If you are running this notebook locally, replace the string below with the\n",
" # path to your service account key and run this cell to authenticate your GCP\n",
" # account.\n",
" elif not os.getenv(\"IS_TESTING\"):\n",
" %env GOOGLE_APPLICATION_CREDENTIALS ''"
"TIMESTAMP = datetime.now().strftime(\"%Y%m%d%H%M%S\")"
]
},
{
@@ -456,8 +161,20 @@
"\n",
"**The following steps are required, regardless of your notebook environment.**\n",
"\n",
"When you submit a training job using the Cloud SDK, you upload a Python package\n",
"containing your training code to a Cloud Storage bucket. Vertex AI runs\n",
"the code from this package. In this tutorial, Vertex AI also saves the\n",
"trained model that results from your job in the same bucket. Using this model artifact, you can then\n",
"create Vertex AI model and endpoint resources in order to serve\n",
"online predictions.\n",
"\n",
"Set the name of your Cloud Storage bucket below. It must be unique across all\n",
"Cloud Storage buckets.\n"
"Cloud Storage buckets.\n",
"\n",
"You may also change the `REGION` variable, which is used for operations\n",
"throughout the rest of this notebook. Make sure to [choose a region where Vertex AI services are\n",
"available](https://cloud.google.com/vertex-ai/docs/general/locations#available_regions). You may\n",
"not use a Multi-Regional Storage bucket for training with Vertex AI."
]
},
{
@@ -468,8 +185,8 @@
},
"outputs": [],
"source": [
"BUCKET_NAME = \"[your-bucket-name]\" # @param {type:\"string\"}\n",
"BUCKET_URI = f\"gs://{BUCKET_NAME}\""
"BUCKET_NAME = \"gs://[your-bucket-name]\" # @param {type:\"string\"}\n",
"REGION = \"[your-region]\" # @param {type:\"string\"}"
]
},
{
@@ -480,9 +197,8 @@
},
"outputs": [],
"source": [
"if BUCKET_NAME == \"\" or BUCKET_NAME is None or BUCKET_NAME == \"[your-bucket-name]\":\n",
" BUCKET_NAME = PROJECT_ID + \"aip-\" + UUID\n",
" BUCKET_URI = f\"gs://{BUCKET_NAME}\""
"if BUCKET_NAME == \"\" or BUCKET_NAME is None or BUCKET_NAME == \"gs://[your-bucket-name]\":\n",
" BUCKET_NAME = \"gs://\" + PROJECT_ID + \"aip-\" + TIMESTAMP"
]
},
{
@@ -502,7 +218,7 @@
},
"outputs": [],
"source": [
"! gsutil mb -l $REGION $BUCKET_URI"
"! gsutil mb -l $REGION $BUCKET_NAME"
]
},
{
@@ -522,37 +238,7 @@
},
"outputs": [],
"source": [
"! gsutil ls -al $BUCKET_URI"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "bmnMD2MjkXUJ"
},
"source": [
"### Import libraries and define constants"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "oqtZRqDEkXUJ"
},
"outputs": [],
"source": [
"import warnings\n",
"\n",
"import pandas as pd\n",
"from google.cloud.bigquery import Client\n",
"from sklearn.model_selection import train_test_split\n",
"from sklearn.preprocessing import StandardScaler\n",
"from tensorflow.keras import Sequential\n",
"from tensorflow.keras.layers import Dense\n",
"from tensorflow.keras.utils import to_categorical\n",
"\n",
"warnings.filterwarnings(\"ignore\")"
"! gsutil ls -al $BUCKET_NAME"
]
},
{
@@ -564,7 +250,7 @@
"## Tutorial\n",
"\n",
"### Fetch the data from BigQuery \n",
"If you are using ***Vertex AI Workbench managed notebooks instance***, below cell which starts with \"#@bigquery\" will be a SQL Query. If you are using Vertex AI Workbench user managed notebooks instance or Colab it will be a markdown cell."
"<a name=\"section-5\"></a>"
]
},
{
@@ -645,22 +331,11 @@
"id": "923fdd823683"
},
"source": [
"If you are using Vertex AI Workbench managed notebooks instance, once the results from BigQuery are displayed in the above cell, click the **Query and load as DataFrame** button and execute the generated code stub to fetch the data into the current notebook as a dataframe.\n",
"Once the results from BigQuery are displayed in the above cell, click the **Query and load as DataFrame** button and execute the generated code stub to fetch the data into the current notebook as a dataframe.\n",
"\n",
"*Note: By default the data is loaded into a `df` variable, though this can be changed before executing the cell if required.*"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "3d44a10b6884"
},
"outputs": [],
"source": [
"client = Client(project=PROJECT_ID)"
]
},
{
"cell_type": "code",
"execution_count": null,
@@ -669,6 +344,12 @@
},
"outputs": [],
"source": [
"# The following two lines are only necessary to run once.\n",
"# Comment out otherwise for speed-up.\n",
"from google.cloud.bigquery import Client\n",
"\n",
"client = Client()\n",
"\n",
"query = \"\"\"WITH traindata AS (\n",
"SELECT b.* except(ad_event_id, user_id), c.* except(id), d.* except(keyword_id, ad_id), a.amount, a.device_type, e.name\n",
"FROM `looker-private-demo.ecomm.ad_events` a\n",
@@ -698,7 +379,45 @@
},
"source": [
"### Preprocess the data\n",
"Select the necessary columns from the e-commerce data and divide them based on their type (numerical/categorical)."
"<a name=\"section-6\"></a>"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "e8503e799eec"
},
"source": [
"Import the required libraries."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "5b11973ccf76"
},
"outputs": [],
"source": [
"import warnings\n",
"\n",
"import pandas as pd\n",
"from sklearn.model_selection import train_test_split\n",
"from sklearn.preprocessing import StandardScaler\n",
"from tensorflow.keras import Sequential\n",
"from tensorflow.keras.layers import Dense\n",
"from tensorflow.keras.utils import to_categorical\n",
"\n",
"warnings.filterwarnings(\"ignore\")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "e48d156d8bb6"
},
"source": [
"Select the necessary columns from the E-commerce data and divide them based on their type (numerical/categorical)."
]
},
{
@@ -728,8 +447,7 @@
"id": "ace612851261"
},
"source": [
"#### Select top three campaigns\n",
"From the current dataset, only the top three campaigns will be chosen to target the users. All the relevant information about the advertisement and the user who purchased an item after seeing the advertisement is available in the dataframe already. "
"From the current dataset, only the top three camapigns will be chosen to target the users. All the relevant information about the advertisement and the user who purchased an item after seeing the advertisement is available in the dataframe already. "
]
},
{
@@ -749,7 +467,7 @@
"id": "f89106348ffe"
},
"source": [
"#### Encode the target variable."
"Encode the target variable."
]
},
{
@@ -766,11 +484,10 @@
{
"cell_type": "markdown",
"metadata": {
"id": "c2d5338b1b95"
"id": "8902f763d1ca"
},
"source": [
"#### One-hot encode the categorical variables\n",
"After one-hot encoding, the first level-column is dropped to avoid the [dummy-variable trap](https://en.wikipedia.org/wiki/Dummy_variable_(statistics)) scenario. This process is called *dummy-encoding*."
"One-hot encode the categorical variables. After one-hot encoding, the first level-column is dropped to avoid the [dummy-variable trap](https://en.wikipedia.org/wiki/Dummy_variable_(statistics)) scenario. This process is called *dummy-encoding*."
]
},
{
@@ -804,7 +521,7 @@
"id": "3abf027eda2d"
},
"source": [
"#### Split the data into train and test"
"Split the data into train and test."
]
},
{
@@ -829,7 +546,7 @@
"id": "d1a32b9d9640"
},
"source": [
"#### Scale the data"
"Scale the data."
]
},
{
@@ -852,6 +569,15 @@
},
"source": [
"### Train a TensorFlow model\n",
"<a name=\"section-7\"></a>"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "3e7656556a48"
},
"source": [
"Convert the target column to a categorical encoded colum (one-hot encoded)."
]
},
@@ -873,7 +599,7 @@
"id": "3dd0014a7e1d"
},
"source": [
"#### Define hyperparameters for model training\n",
"Define hyperparameters for model training. \n",
"\n",
"*Note: Comment or remove the parameters from the following cell if they are provided already as an input parameter through the executor feature.*"
]
@@ -898,7 +624,7 @@
"id": "406b731f576b"
},
"source": [
"#### Define the architecture and compile the model"
"Define the architecture and compile the model."
]
},
{
@@ -938,7 +664,7 @@
"id": "4ab12c34f258"
},
"source": [
"#### Train the model"
"Fit the model."
]
},
{
@@ -952,13 +678,23 @@
"history = model.fit(X_train, y_train_categ, epochs=50, verbose=1)"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "51a2d0b52df3"
},
"source": [
"### Run the model on test data\n",
"<a name=\"section-8\"></a>"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "f08445f2cd02"
},
"source": [
"### Evaluate the model on test data."
"Evaluate the model on test data."
]
},
{
@@ -973,24 +709,16 @@
"print(f\"Test results - Loss: {test_results}\")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "81ef0e081340"
},
"source": [
"**Note:** Please note that executor feature is available only in Vertex AI Workbench managed notebooks"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "9769168778e8"
},
"source": [
"### Automating the execution of the notebook using executor in Vertex AI Workbench managed notebooks instance\n",
"### Automating the execution of the notebook using executor\n",
"<a name=\"section-9\"></a>\n",
"\n",
"If you are using Vertex AI Workbench managed notebooks instance, the executor can help you run a notebook file from start to end, with your choice of the environment, machine type, input parameters, and other characteristics. After setting up an execution, the notebook is executed as a job in Vertex AI custom training. Your jobs can be monitored from the <b>Notebook Executor</b> pane in the menu on the left.\n",
"The executor can help you run a notebook file from start to end, with your choice of the environment, machine type, input parameters, and other characteristics. After setting up an execution, the notebook is executed as a job in Vertex AI custom training. Your jobs can be monitored from the <b>Notebook Executor</b> pane in the menu on the left.\n",
"\n",
"<img src=\"images/executor.png\"></img>\n",
"\n",
@@ -1003,9 +731,10 @@
"id": "cf486c351581"
},
"source": [
"### Scheduled runs on executor in Vertex AI Workbench managed notebooks instance\n",
"### Scheduled runs on executor\n",
"<a name=\"section-10\"></a>\n",
"\n",
"Vertex AI Workbench managed noteboook runs can also be scheduled recurringly with the executor. To do so, select <b>Schedule-based recurring executions</b> as the run type instead of <b>One-time execution</b>. The frequency of the job and the time when it executes is provided when you create the execution.\n",
"Notebook runs can also be scheduled recurringly with the executor. To do so, select <b>Schedule-based recurring executions</b> as the run type instead of <b>One-time execution</b>. The frequency of the job and the time when it executes is provided when you create the execution.\n",
"\n",
"<img src=\"images/executor_scheduled_runs2.png\"></img>"
]
@@ -1017,8 +746,9 @@
},
"source": [
"### Parameterizing the variables\n",
"<a name=\"section-11\"></a>\n",
"\n",
"If you are using Vertex AI Workbench managed notebooks instance, executor lets you run a notebook with different sets of input parameters. If required, constants in the notebook can be treated as arguments to a function, and when you submit the execution, you can provide those constants as input parameters.\n",
"Executor lets you run a notebook with different sets of input parameters. If required, constants in the notebook can be treated as arguments to a function, and when you submit the execution, you can provide those constants as input parameters.\n",
"\n",
"<img src=\"images/executor_input_parameters.png\"></img>\n",
"\n",
@@ -1032,6 +762,7 @@
},
"source": [
"### Save the model to a Cloud Storage path\n",
"<a name=\"section-12\"></a>\n",
"\n",
"TensorFlow's `model.save()` method supports Cloud Storage paths as well as the local file paths while writing the model object to a file. It needs to be ensured that the service account being used to run this notebook has `write` permissions to the specified Cloud Storage path."
]
@@ -1044,7 +775,7 @@
},
"outputs": [],
"source": [
"GCS_PATH = BUCKET_URI + \"/path-to-save/\"\n",
"GCS_PATH = \"gs://\" + BUCKET_NAME + \"/[path-to-save]/\"\n",
"model.save(GCS_PATH)"
]
},
@@ -1054,7 +785,8 @@
"id": "29c0ca2a517a"
},
"source": [
"## Cleaning up\n",
"## Clean up\n",
"<a name=\"section-13\"></a>\n",
"\n",
"To clean up all Google Cloud resources used in this project, you can [delete the Google Cloud\n",
"project](https://cloud.google.com/resource-manager/docs/creating-managing-projects#shutting_down_projects) you used for the tutorial.\n",
@@ -1070,11 +802,7 @@
},
"outputs": [],
"source": [
"# Delete the Cloud Storage bucket\n",
"\n",
"delete_bucket = False\n",
"if delete_bucket or os.getenv(\"IS_TESTING\"):\n",
" ! gsutil -m rm -r $BUCKET_URI"
"! gsutil -m rm -r [cloud-storage-folder-path-to-delete]"
]
}
],

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