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https://github.com/GoogleCloudPlatform/vertex-ai-samples.git
synced 2026-09-27 07:31:58 +00:00
Compare commits
2
Commits
| Author | SHA1 | Date | |
|---|---|---|---|
|
|
06daeb1575 | ||
|
|
2074fb56a9 |
@@ -1,29 +1,10 @@
|
||||
from typing import List
|
||||
from ratemate import RateLimit
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||||
import argparse
|
||||
|
||||
parser = argparse.ArgumentParser()
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||||
parser.add_argument("--dry_run",
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type=bool,
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||||
default=False)
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||||
args = parser.parse_args()
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||||
|
||||
|
||||
from resource_cleanup_manager import (
|
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DatasetResourceCleanupManager,
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||||
ModelResourceCleanupManager,
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||||
EndpointResourceCleanupManager,
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||||
ResourceCleanupManager,
|
||||
MatchingEngineIndexEndpointResourceCleanupManager,
|
||||
MatchingEngineIndexResourceCleanupManager,
|
||||
FeatureStoreCleanupManager,
|
||||
PipelineJobCleanupManager,
|
||||
TrainingJobCleanupManager,
|
||||
HyperparameterTuningCleanupManager,
|
||||
BatchPredictionJobCleanupManager,
|
||||
ExperimentCleanupManager,
|
||||
BucketCleanupManager,
|
||||
ArtifactRegistryCleanupManager
|
||||
)
|
||||
|
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rate_limit = RateLimit(max_count=25, per=60, greedy=False)
|
||||
@@ -40,6 +21,7 @@ def run_cleanup_managers(managers: List[ResourceCleanupManager], is_dry_run: boo
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try:
|
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if not manager.is_deletable(resource):
|
||||
continue
|
||||
|
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if is_dry_run:
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resource_name = manager.resource_name(resource)
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print(f"Will delete '{type_name}': {resource_name}")
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@@ -52,24 +34,16 @@ def run_cleanup_managers(managers: List[ResourceCleanupManager], is_dry_run: boo
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print("")
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||||
|
||||
|
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if args.dry_run:
|
||||
is_dry_run = False
|
||||
|
||||
if is_dry_run:
|
||||
print("Starting cleanup in dry run mode...")
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||||
|
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# List of all cleanup managers
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managers: List[ResourceCleanupManager] = [
|
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managers = [
|
||||
DatasetResourceCleanupManager(),
|
||||
EndpointResourceCleanupManager(),
|
||||
ModelResourceCleanupManager(), # ModelResourceCleanupManager must follow EndpointResourceCleanupManager due to deployed models blocking model deletion.
|
||||
MatchingEngineIndexEndpointResourceCleanupManager(),
|
||||
MatchingEngineIndexResourceCleanupManager(),
|
||||
FeatureStoreCleanupManager(),
|
||||
PipelineJobCleanupManager(),
|
||||
TrainingJobCleanupManager(),
|
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HyperparameterTuningCleanupManager(),
|
||||
BatchPredictionJobCleanupManager(),
|
||||
ExperimentCleanupManager(), # Experiment missing _resource_noun
|
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BucketCleanupManager(),
|
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ArtifactRegistryCleanupManager()
|
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]
|
||||
|
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run_cleanup_managers(managers=managers, is_dry_run=args.dry_run)
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run_cleanup_managers(managers=managers, is_dry_run=is_dry_run)
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|
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@@ -1,18 +1,8 @@
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'''
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READ FIRST BEFORE MAKING CHANGES
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- Create a convention for resources created from vertex-ai-samples GH. We already have one IIRC
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- Only delete those objects as part of our clean-up script.
|
||||
- Don't run any tests on python-docs-samples-tests project, especially ones that affect resources created outside of our purview
|
||||
- Add --dry-run option to the clean-up script. This option will just output the list of resources the script will delete instead of actually deleting the resources.
|
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- Have a larger conversation in DEE before touching any resources that were not created as part of vertex-ai-samples
|
||||
'''
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import os
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||||
import abc
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from typing import Any, Type
|
||||
|
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from google.cloud import aiplatform
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from google.cloud.aiplatform import base
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from google.cloud import storage
|
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from proto.datetime_helpers import DatetimeWithNanoseconds
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|
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# If a resource was updated within this number of seconds, do not delete.
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@@ -79,7 +69,7 @@ class VertexAIResourceCleanupManager(ResourceCleanupManager):
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def delete(self, resource):
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resource.delete()
|
||||
|
||||
def get_seconds_since_modification(self, resource: Any) -> float:
|
||||
def get_seconds_since_modification(self, resource: Any) -> bool:
|
||||
update_time = resource.update_time
|
||||
current_time = DatetimeWithNanoseconds.now(tz=update_time.tzinfo)
|
||||
return (current_time - update_time).total_seconds()
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||||
@@ -107,154 +97,15 @@ class EndpointResourceCleanupManager(VertexAIResourceCleanupManager):
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vertex_ai_resource = aiplatform.Endpoint
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||||
|
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def delete(self, resource):
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||||
# TODO: Remove this once https://github.com/googleapis/python-aiplatform/issues/1441 is fixed
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||||
resource._sync_gca_resource()
|
||||
for deployed_model_id in [
|
||||
models.id for models in resource._gca_resource.deployed_models
|
||||
]:
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resource._undeploy(deployed_model_id=deployed_model_id)
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|
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resource.delete(force=True)
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|
||||
|
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class ModelResourceCleanupManager(VertexAIResourceCleanupManager):
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vertex_ai_resource = aiplatform.Model
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||||
|
||||
|
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class MatchingEngineIndexResourceCleanupManager(VertexAIResourceCleanupManager):
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vertex_ai_resource = aiplatform.MatchingEngineIndex
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|
||||
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class MatchingEngineIndexEndpointResourceCleanupManager(VertexAIResourceCleanupManager):
|
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vertex_ai_resource = aiplatform.MatchingEngineIndexEndpoint
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|
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def delete(self, resource):
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resource.undeploy_all()
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resource.delete(force=True)
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|
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class FeatureStoreCleanupManager(VertexAIResourceCleanupManager):
|
||||
vertex_ai_resource = aiplatform.Featurestore
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|
||||
def resource_name(self, resource: Any) -> str:
|
||||
return resource.name
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||||
|
||||
class PipelineJobCleanupManager(VertexAIResourceCleanupManager):
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vertex_ai_resource = aiplatform.PipelineJob
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|
||||
class TrainingJobCleanupManager(VertexAIResourceCleanupManager):
|
||||
vertex_ai_resource = aiplatform.training_jobs._CustomTrainingJob
|
||||
|
||||
job_types = [
|
||||
aiplatform.AutoMLImageTrainingJob,
|
||||
aiplatform.AutoMLTextTrainingJob,
|
||||
aiplatform.AutoMLTabularTrainingJob,
|
||||
aiplatform.AutoMLVideoTrainingJob,
|
||||
aiplatform.AutoMLForecastingTrainingJob,
|
||||
aiplatform.CustomJob,
|
||||
aiplatform.CustomTrainingJob,
|
||||
aiplatform.CustomContainerTrainingJob,
|
||||
aiplatform.CustomPythonPackageTrainingJob
|
||||
]
|
||||
|
||||
def list(self) -> Any:
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||||
return [
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job
|
||||
for job_type in self.job_types
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for job in job_type.list()
|
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]
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|
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class HyperparameterTuningCleanupManager(VertexAIResourceCleanupManager):
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vertex_ai_resource = aiplatform.HyperparameterTuningJob
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|
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|
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class BatchPredictionJobCleanupManager(VertexAIResourceCleanupManager):
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vertex_ai_resource = aiplatform.BatchPredictionJob
|
||||
|
||||
class ExperimentCleanupManager(VertexAIResourceCleanupManager):
|
||||
vertex_ai_resource = aiplatform.Experiment
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||||
|
||||
@property
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||||
def type_name(self) -> str:
|
||||
return "Experiment"
|
||||
|
||||
def resource_name(self, resource: Any) -> str:
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||||
return resource.name
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||||
|
||||
def get_seconds_since_modification(self, resource: Any) -> float:
|
||||
update_time = resource._metadata_context.update_time
|
||||
current_time = DatetimeWithNanoseconds.now()
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return float(current_time.timestamp() - update_time.timestamp())
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||||
|
||||
class BucketCleanupManager(ResourceCleanupManager):
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vertex_ai_resource = storage.bucket.Bucket
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||||
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||||
def list(self) -> Any:
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storage_client = storage.Client()
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return list(storage_client.list_buckets())
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||||
|
||||
def delete(self, resource):
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try:
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resource.delete(force=True)
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||||
except Exception as e:
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||||
print(e)
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||||
|
||||
@property
|
||||
def type_name(self) -> str:
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||||
return "Bucket"
|
||||
|
||||
def get_seconds_since_modification(self, resource: Any) -> float:
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||||
# Bucket has no last_update property, only time created
|
||||
created_time = resource.time_created
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||||
current_time = DatetimeWithNanoseconds.now()
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||||
return float(current_time.timestamp() - created_time.timestamp())
|
||||
|
||||
def resource_name(self, resource: Any) -> str:
|
||||
return resource.name
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||||
|
||||
def is_deletable(self, resource: Any) -> bool:
|
||||
time_difference = self.get_seconds_since_modification(resource)
|
||||
|
||||
if not self.resource_name(resource).startswith('your-bucket-name'):
|
||||
print(f"Skipping '{resource}' not a Vertex AI notebook bucket")
|
||||
return False
|
||||
|
||||
# Check that it wasn't created too recently, to prevent race conditions
|
||||
if time_difference <= RESOURCE_UPDATE_BUFFER_IN_SECONDS:
|
||||
print(
|
||||
f"Skipping '{resource}' due to update_time being '{time_difference}', which is less than '{RESOURCE_UPDATE_BUFFER_IN_SECONDS}'."
|
||||
)
|
||||
return False
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||||
return True
|
||||
|
||||
class ArtifactRegistryCleanupManager(ResourceCleanupManager):
|
||||
vertex_ai_resource = "Artifact Registry"
|
||||
|
||||
def list(self) -> Any:
|
||||
import subprocess
|
||||
|
||||
result = subprocess.run(["gcloud artifacts repositories list --location=us-central1"],
|
||||
shell=True, capture_output=True, text=True)
|
||||
|
||||
ret = []
|
||||
lines = result.stdout.split('\n')[2:]
|
||||
for line in lines:
|
||||
repo = line.split(' ')[0]
|
||||
if repo.startswith("my-docker-repo"):
|
||||
ret.append(repo)
|
||||
|
||||
return ret
|
||||
|
||||
def delete(self, resource):
|
||||
os.system(f"! gcloud artifacts repositories delete {resource} --location=us-central1")
|
||||
|
||||
@property
|
||||
def type_name(self) -> str:
|
||||
return "ArtifactRepository"
|
||||
|
||||
def resource_name(self, resource: Any) -> str:
|
||||
return resource
|
||||
|
||||
# delete repository regardless of age
|
||||
def get_seconds_since_modification(self, resource: Any) -> float:
|
||||
return RESOURCE_UPDATE_BUFFER_IN_SECONDS + 1
|
||||
|
||||
def is_deleteable(self, resource: Any) -> bool:
|
||||
return True
|
||||
|
||||
|
||||
@@ -17,7 +17,6 @@
|
||||
|
||||
import argparse
|
||||
import pathlib
|
||||
import os
|
||||
|
||||
import execute_changed_notebooks_helper
|
||||
|
||||
@@ -40,19 +39,6 @@ parser.add_argument(
|
||||
help="The path to the file that has newline-limited folders of notebooks that should be tested.",
|
||||
required=True,
|
||||
)
|
||||
parser.add_argument(
|
||||
"--test_percent",
|
||||
type=int,
|
||||
help="The percent of notebooks to be tested (between 1 and 100).",
|
||||
required=False,
|
||||
default=100,
|
||||
)
|
||||
parser.add_argument(
|
||||
"--build_id",
|
||||
type=str,
|
||||
help="The build id (which may be a Cloud Build job specific or user explicit.",
|
||||
required=True
|
||||
)
|
||||
parser.add_argument(
|
||||
"--base_branch",
|
||||
help="The base git branch to diff against to find changed files.",
|
||||
@@ -121,60 +107,24 @@ parser.add_argument(
|
||||
default=True,
|
||||
help="Should run notebooks in parallel.",
|
||||
)
|
||||
parser.add_argument(
|
||||
"--concurrent_notebooks",
|
||||
type=int,
|
||||
help="Maximum number of parallel notebook executions per minute",
|
||||
default=10,
|
||||
required=False,
|
||||
)
|
||||
parser.add_argument(
|
||||
"--dry_run",
|
||||
type=str2bool,
|
||||
default=False,
|
||||
help="Dry run for testing - no execution",
|
||||
)
|
||||
|
||||
args = parser.parse_args()
|
||||
|
||||
changed_notebooks = execute_changed_notebooks_helper.get_changed_notebooks(
|
||||
notebooks = execute_changed_notebooks_helper.get_changed_notebooks(
|
||||
test_paths_file=args.test_paths_file,
|
||||
base_branch=args.base_branch,
|
||||
)
|
||||
|
||||
|
||||
results_bucket = f"{args.artifacts_bucket}"
|
||||
# artifacts_bucket may get set by trigger to a full gs:// folder path
|
||||
if results_bucket.startswith("gs://"):
|
||||
results_bucket = results_bucket[5:]
|
||||
results_bucket = results_bucket.split('/')[0]
|
||||
results_file = f"build_results/{args.build_id}.json"
|
||||
|
||||
if args.test_percent == 100:
|
||||
notebooks = changed_notebooks
|
||||
accumulative_results = {}
|
||||
else:
|
||||
accumulative_results = execute_changed_notebooks_helper.load_results(results_bucket, results_file)
|
||||
|
||||
notebooks = [changed_notebook for changed_notebook in changed_notebooks if execute_changed_notebooks_helper.select_notebook(changed_notebook, accumulative_results, args.test_percent)]
|
||||
|
||||
if args.dry_run:
|
||||
print("Dry run ...\n")
|
||||
for notebook in notebooks:
|
||||
print(f"Would execute: {notebook}")
|
||||
else:
|
||||
execute_changed_notebooks_helper.process_and_execute_notebooks(
|
||||
notebooks=notebooks,
|
||||
container_uri=args.container_uri,
|
||||
staging_bucket=args.staging_bucket,
|
||||
artifacts_bucket=args.artifacts_bucket,
|
||||
results_file=results_file,
|
||||
should_parallelize=args.should_parallelize,
|
||||
timeout=args.timeout,
|
||||
variable_project_id=args.variable_project_id,
|
||||
variable_region=args.variable_region,
|
||||
variable_service_account=args.variable_service_account,
|
||||
variable_vpc_network=args.variable_vpc_network,
|
||||
private_pool_id=args.private_pool_id,
|
||||
concurrent_notebooks=args.concurrent_notebooks,
|
||||
execute_changed_notebooks_helper.process_and_execute_notebooks(
|
||||
notebooks=notebooks,
|
||||
container_uri=args.container_uri,
|
||||
staging_bucket=args.staging_bucket,
|
||||
artifacts_bucket=args.artifacts_bucket,
|
||||
should_parallelize=args.should_parallelize,
|
||||
timeout=args.timeout,
|
||||
variable_project_id=args.variable_project_id,
|
||||
variable_region=args.variable_region,
|
||||
variable_service_account=args.variable_service_account,
|
||||
variable_vpc_network=args.variable_vpc_network,
|
||||
private_pool_id=args.private_pool_id,
|
||||
)
|
||||
|
||||
@@ -21,30 +21,24 @@ import json
|
||||
import git
|
||||
import operator
|
||||
import os
|
||||
import io
|
||||
import json
|
||||
import pathlib
|
||||
import re
|
||||
import subprocess
|
||||
import random
|
||||
from google.cloud import storage
|
||||
import utils
|
||||
from typing import List, Optional, Dict, Any
|
||||
from typing import List, Optional
|
||||
from utils import util
|
||||
|
||||
import execute_notebook_helper
|
||||
import execute_notebook_remote
|
||||
import nbformat
|
||||
from google.cloud.devtools.cloudbuild_v1.types import BuildOperationMetadata
|
||||
from ratemate import RateLimit
|
||||
from tabulate import tabulate
|
||||
from utils import NotebookProcessors, util
|
||||
|
||||
# A buffer so that workers finish before the orchestrating job
|
||||
WORKER_TIMEOUT_BUFFER_IN_SECONDS: int = 60 * 60
|
||||
PYTHON_VERSION = "3.9" # Set default python version
|
||||
|
||||
# rolling time window for accumulating build results for selecting notebooks
|
||||
MAX_RESULTS_AGE_SECONDS: int = (60 * 60) * 24 * 60 # 60 days
|
||||
PYTHON_VERSION = "3.9" # Set default python version
|
||||
|
||||
|
||||
def format_timedelta(delta: datetime.timedelta) -> str:
|
||||
@@ -71,9 +65,7 @@ def format_timedelta(delta: datetime.timedelta) -> str:
|
||||
@dataclasses.dataclass
|
||||
class NotebookExecutionResult:
|
||||
name: str
|
||||
path: str
|
||||
duration: datetime.timedelta
|
||||
start_time: datetime.datetime
|
||||
is_pass: bool
|
||||
log_url: str
|
||||
output_uri: str
|
||||
@@ -89,75 +81,6 @@ class NotebookExecutionResult:
|
||||
return None
|
||||
|
||||
|
||||
def load_results(results_bucket: str,
|
||||
results_file: str) -> Dict[str, Any]:
|
||||
'''
|
||||
Load accumulated notebook test results
|
||||
'''
|
||||
|
||||
print("Loading existing accumulative results ...")
|
||||
accumulative_results = {}
|
||||
try:
|
||||
client = storage.Client()
|
||||
bucket = client.bucket(results_bucket)
|
||||
|
||||
build_results_dir = os.path.dirname(results_file)
|
||||
blobs = client.list_blobs(results_bucket, prefix=build_results_dir)
|
||||
for blob in blobs:
|
||||
time_created = blob.time_created.replace(tzinfo=None)
|
||||
if (datetime.datetime.now().replace(tzinfo=None) - time_created).total_seconds() > MAX_RESULTS_AGE_SECONDS:
|
||||
continue
|
||||
|
||||
content = util.download_blob_into_memory(results_bucket, blob.name, download_as_text=True)
|
||||
|
||||
try:
|
||||
build_results = json.loads(content)
|
||||
except:
|
||||
continue # skip corrupted build results files
|
||||
for notebook in build_results:
|
||||
if notebook in accumulative_results:
|
||||
accumulative_results[notebook]['passed'] += build_results[notebook]['passed']
|
||||
accumulative_results[notebook]['failed'] += build_results[notebook]['failed']
|
||||
else:
|
||||
accumulative_results[notebook] = build_results[notebook]
|
||||
|
||||
print(accumulative_results)
|
||||
except Exception as e:
|
||||
print(e)
|
||||
|
||||
# If there are no accumulative results, an empty dict is returned
|
||||
return accumulative_results
|
||||
|
||||
def select_notebook(changed_notebook: str,
|
||||
accumulative_results: Dict[str, Any],
|
||||
test_percent: int) -> bool:
|
||||
'''
|
||||
Algorithm to randomly select a notebook, but weight the propbability of selected based on past failures
|
||||
'''
|
||||
|
||||
if changed_notebook in accumulative_results:
|
||||
pass_count = accumulative_results[changed_notebook]['passed']
|
||||
fail_count = accumulative_results[changed_notebook]['failed']
|
||||
else:
|
||||
pass_count = 1
|
||||
fail_count = 0
|
||||
|
||||
inferred_failure_rate = fail_count / (pass_count + fail_count)
|
||||
|
||||
# If failure rate is high, the chance of testing should be higher
|
||||
should_test_due_to_failure = random.uniform(0, 1) <= inferred_failure_rate
|
||||
|
||||
# Additionally, only test a percentage of these
|
||||
should_test_due_to_random_subset = random.uniform(0, 1) <= (test_percent / 100)
|
||||
|
||||
if should_test_due_to_failure or should_test_due_to_random_subset:
|
||||
print(f"Selected: {changed_notebook}, {should_test_due_to_failure}, {should_test_due_to_random_subset}")
|
||||
return True
|
||||
else:
|
||||
print(f"Not Selected: {changed_notebook}, pass {pass_count}, fail {fail_count}")
|
||||
return False
|
||||
|
||||
|
||||
def _process_notebook(
|
||||
notebook_path: str,
|
||||
variable_project_id: str,
|
||||
@@ -179,7 +102,6 @@ def _process_notebook(
|
||||
"VPC_NETWORK": variable_vpc_network,
|
||||
},
|
||||
)
|
||||
unique_strings_preprocessor = NotebookProcessors.UniqueStringsPreprocessor()
|
||||
|
||||
# Use no-execute preprocessor
|
||||
(
|
||||
@@ -188,7 +110,6 @@ def _process_notebook(
|
||||
) = remove_no_execute_cells_preprocessor.preprocess(nb)
|
||||
|
||||
(nb, resources) = update_variables_preprocessor.preprocess(nb, resources)
|
||||
(nb, resources) = unique_strings_preprocessor.preprocess(nb, resources)
|
||||
|
||||
with open(notebook_path, mode="w", encoding="utf-8") as new_file:
|
||||
nbformat.write(nb, new_file)
|
||||
@@ -206,15 +127,13 @@ def _get_notebook_python_version(notebook_path: str) -> str:
|
||||
src = file.read()
|
||||
nb_json = json.loads(src)
|
||||
|
||||
# Iterate over the cells in the ipynb
|
||||
for cell in nb_json["cells"]:
|
||||
if cell["cell_type"] == "markdown":
|
||||
markdown = str.join("", cell["source"])
|
||||
#Iterate over the cells in the ipynb
|
||||
for cell in nb_json['cells']:
|
||||
if cell['cell_type'] == 'markdown':
|
||||
markdown = str.join('', cell['source'])
|
||||
|
||||
# Look for the python version specification pattern
|
||||
re_match = re.search(
|
||||
"python version = (\d\.\d)", markdown, flags=re.IGNORECASE
|
||||
)
|
||||
re_match = re.search('python version = (\d\.\d)', markdown, flags=re.IGNORECASE)
|
||||
if re_match:
|
||||
# get the version number
|
||||
python_version = re_match.group(1)
|
||||
@@ -233,6 +152,7 @@ def _create_tag(filepath: str) -> str:
|
||||
return tag
|
||||
|
||||
|
||||
rate_limit = RateLimit(max_count=50, per=60, greedy=True)
|
||||
|
||||
|
||||
def process_and_execute_notebook(
|
||||
@@ -248,6 +168,7 @@ def process_and_execute_notebook(
|
||||
notebook: str,
|
||||
should_get_tail_logs: bool = False,
|
||||
) -> NotebookExecutionResult:
|
||||
rate_limit.wait() # wait before creating the task
|
||||
|
||||
print(f"Running notebook: {notebook}")
|
||||
|
||||
@@ -266,9 +187,7 @@ def process_and_execute_notebook(
|
||||
|
||||
result = NotebookExecutionResult(
|
||||
name=tag,
|
||||
path=notebook,
|
||||
duration=datetime.timedelta(seconds=0),
|
||||
start_time=datetime.datetime.now(),
|
||||
is_pass=False,
|
||||
output_uri=notebook_output_uri,
|
||||
log_url="",
|
||||
@@ -278,12 +197,11 @@ def process_and_execute_notebook(
|
||||
)
|
||||
|
||||
# TODO: Handle cases where multiple notebooks have the same name
|
||||
time_start = datetime.datetime.now()
|
||||
operation = None
|
||||
try:
|
||||
# Get the python version for running the notebook if specified
|
||||
notebook_exec_python_version = _get_notebook_python_version(
|
||||
notebook_path=notebook
|
||||
)
|
||||
notebook_exec_python_version = _get_notebook_python_version(notebook_path=notebook)
|
||||
print(f"Running notebook with python {notebook_exec_python_version}")
|
||||
|
||||
# Pre-process notebook by substituting variable names
|
||||
@@ -312,7 +230,7 @@ def process_and_execute_notebook(
|
||||
private_pool_id=private_pool_id,
|
||||
private_pool_region=variable_region,
|
||||
timeout_in_seconds=timeout_in_seconds,
|
||||
python_version=notebook_exec_python_version,
|
||||
python_version=notebook_exec_python_version
|
||||
)
|
||||
|
||||
operation_metadata = BuildOperationMetadata(mapping=operation.metadata)
|
||||
@@ -321,12 +239,11 @@ def process_and_execute_notebook(
|
||||
result.logs_bucket = operation_metadata.build.logs_bucket
|
||||
|
||||
# Block and wait for the result
|
||||
operation_result = operation.result(timeout=timeout_in_seconds)
|
||||
operation_result = operation.result()
|
||||
|
||||
result.duration = datetime.datetime.now() - result.start_time
|
||||
result.duration = datetime.datetime.now() - time_start
|
||||
result.is_pass = True
|
||||
print(f"{notebook} PASSED in {format_timedelta(result.duration)}.")
|
||||
|
||||
except Exception as error:
|
||||
result.error_message = str(error)
|
||||
|
||||
@@ -345,7 +262,7 @@ def process_and_execute_notebook(
|
||||
except Exception as error:
|
||||
result.error_message = str(error)
|
||||
|
||||
result.duration = datetime.datetime.now() - result.start_time
|
||||
result.duration = datetime.datetime.now() - time_start
|
||||
result.is_pass = False
|
||||
|
||||
print(
|
||||
@@ -413,44 +330,12 @@ def get_changed_notebooks(
|
||||
|
||||
return notebooks
|
||||
|
||||
def _save_results(results: List[NotebookExecutionResult],
|
||||
artifacts_bucket: str,
|
||||
results_file: str):
|
||||
|
||||
artifacts_bucket = artifacts_bucket.replace("gs://", "").split('/')[0]
|
||||
|
||||
print("Updating build results ...")
|
||||
build_results = {}
|
||||
for result in results:
|
||||
if result.is_pass:
|
||||
pass_count = 1
|
||||
fail_count = 0
|
||||
else:
|
||||
pass_count = 0
|
||||
fail_count = 1
|
||||
build_results[result.path] = {
|
||||
'duration': result.duration.total_seconds(),
|
||||
'start_time': str(result.start_time),
|
||||
'passed': pass_count,
|
||||
'failed': fail_count
|
||||
}
|
||||
print(f"adding {result.path}")
|
||||
|
||||
print("Saving accumulative results ...")
|
||||
content = json.dumps(build_results)
|
||||
|
||||
client = storage.Client()
|
||||
bucket = client.get_bucket(artifacts_bucket)
|
||||
bucket.blob(str(results_file)).upload_from_string(content, 'text/json')
|
||||
|
||||
|
||||
|
||||
def process_and_execute_notebooks(
|
||||
notebooks: List[str],
|
||||
container_uri: str,
|
||||
staging_bucket: str,
|
||||
artifacts_bucket: str,
|
||||
results_file: str,
|
||||
should_parallelize: bool,
|
||||
timeout: int,
|
||||
variable_project_id: str,
|
||||
@@ -458,7 +343,6 @@ def process_and_execute_notebooks(
|
||||
variable_service_account: str,
|
||||
variable_vpc_network: Optional[str] = None,
|
||||
private_pool_id: Optional[str] = None,
|
||||
concurrent_notebooks: Optional[int] = 10,
|
||||
):
|
||||
"""
|
||||
Run the notebooks that exist under the folders defined in the test_paths_file.
|
||||
@@ -479,8 +363,6 @@ def process_and_execute_notebooks(
|
||||
Required. The GCS staging bucket to write source code to.
|
||||
artifacts_bucket (str):
|
||||
Required. The GCS staging bucket to write executed notebooks to.
|
||||
results_file (str):
|
||||
Required: The path to the artifacts bucket to save results
|
||||
variable_project_id (str):
|
||||
Required. The value for PROJECT_ID to inject into notebooks.
|
||||
variable_region (str):
|
||||
@@ -489,7 +371,6 @@ def process_and_execute_notebooks(
|
||||
Required. Should run notebooks in parallel using a thread pool as opposed to in sequence.
|
||||
timeout (str):
|
||||
Required. Timeout string according to https://cloud.google.com/build/docs/build-config-file-schema#timeout.
|
||||
concurrent_notebooks (int): Max number of notebooks per minute to run in parallel.
|
||||
"""
|
||||
|
||||
# Calculate deadline
|
||||
@@ -506,9 +387,7 @@ def process_and_execute_notebooks(
|
||||
print(
|
||||
"Running notebooks in parallel, so no logs will be displayed. Please wait..."
|
||||
)
|
||||
|
||||
|
||||
with concurrent.futures.ThreadPoolExecutor(max_workers=concurrent_notebooks) as executor:
|
||||
with concurrent.futures.ThreadPoolExecutor(max_workers=100) as executor:
|
||||
print(f"Max workers: {executor._max_workers}")
|
||||
|
||||
notebook_execution_results = list(
|
||||
@@ -564,7 +443,7 @@ def process_and_execute_notebooks(
|
||||
result.log_url,
|
||||
result.output_uri,
|
||||
result.output_uri_web,
|
||||
result.logs_bucket,
|
||||
result.logs_bucket
|
||||
]
|
||||
for result in results_sorted
|
||||
],
|
||||
@@ -575,38 +454,34 @@ def process_and_execute_notebooks(
|
||||
"log_url",
|
||||
"output_uri",
|
||||
"output_uri_web",
|
||||
"logs_bucket",
|
||||
"logs_bucket"
|
||||
],
|
||||
)
|
||||
)
|
||||
|
||||
if len(notebooks) == 1:
|
||||
print("=" * 100)
|
||||
print("The notebook execution build log:\n")
|
||||
print("=" * 100)
|
||||
print("="*100)
|
||||
print("The notebook execution build log:\n")
|
||||
print("="*100)
|
||||
|
||||
build_id = results_sorted[0].build_id
|
||||
logs_bucket_name = (results_sorted[0].logs_bucket).replace("gs://", "")
|
||||
log_file_name = f"log-{build_id}.txt"
|
||||
build_id = results_sorted[0].build_id
|
||||
logs_bucket_name = (results_sorted[0].logs_bucket).removeprefix("gs://")
|
||||
log_file_name = f"log-{build_id}.txt"
|
||||
|
||||
log_contents = util.download_blob_into_memory(
|
||||
bucket_name=logs_bucket_name,
|
||||
blob_name=log_file_name,
|
||||
download_as_text=True,
|
||||
log_contents = util.download_blob_into_memory(
|
||||
bucket_name=logs_bucket_name,
|
||||
blob_name=log_file_name,
|
||||
download_as_text=True
|
||||
)
|
||||
|
||||
# Remove extra steps from the log
|
||||
match = re.search("starting Step #4", log_contents, flags=re.IGNORECASE)
|
||||
# Remove extra steps from the log
|
||||
match = re.search("starting Step #4", log_contents, flags=re.IGNORECASE)
|
||||
|
||||
if match is not None:
|
||||
match_index = match.span()[0]
|
||||
print(log_contents[match_index:])
|
||||
else:
|
||||
print(log_contents)
|
||||
|
||||
_save_results(results_sorted,
|
||||
artifacts_bucket,
|
||||
results_file)
|
||||
if match is not None:
|
||||
match_index = match.span()[0]
|
||||
print(log_contents[match_index:])
|
||||
else:
|
||||
print(log_contents)
|
||||
|
||||
print("\n=== END RESULTS===\n")
|
||||
|
||||
|
||||
@@ -36,7 +36,7 @@ steps:
|
||||
- -c
|
||||
- |
|
||||
. workspace/env/bin/activate &&
|
||||
python3 .cloud-build/execute_changed_notebooks_cli.py --test_paths_file "${_TEST_PATHS_FILE}" --base_branch "${_FORCED_BASE_BRANCH}" --container_uri ${_PYTHON_IMAGE} --staging_bucket ${_GCS_STAGING_BUCKET} --artifacts_bucket ${_GCS_STAGING_BUCKET}/executed_notebooks/PR_${_PR_NUMBER}/BUILD_${BUILD_ID} --variable_project_id ${PROJECT_ID} --variable_region ${_GCP_REGION} --variable_service_account ${_GCP_SERVICE_ACCOUNT} --variable_vpc_network "${_GPC_VPC_NETWORK_NAME}" `if [ ! -z "${_PRIVATE_POOL_NAME}" ]; then echo "--private_pool_id ${_PRIVATE_POOL_NAME}"; fi` --build_id ${BUILD_ID} --test_percent=${_TEST_PERCENT} --concurrent_notebooks=${_CONCURRENT_NOTEBOOKS}
|
||||
python3 .cloud-build/execute_changed_notebooks_cli.py --test_paths_file "${_TEST_PATHS_FILE}" --base_branch "${_FORCED_BASE_BRANCH}" --container_uri ${_PYTHON_IMAGE} --staging_bucket ${_GCS_STAGING_BUCKET} --artifacts_bucket ${_GCS_STAGING_BUCKET}/executed_notebooks/PR_${_PR_NUMBER}/BUILD_${BUILD_ID} --variable_project_id ${PROJECT_ID} --variable_region ${_GCP_REGION} --variable_service_account ${_GCP_SERVICE_ACCOUNT} --variable_vpc_network "${_GPC_VPC_NETWORK_NAME}" `if [ ! -z "${_PRIVATE_POOL_NAME}" ]; then echo "--private_pool_id ${_PRIVATE_POOL_NAME}"; fi`
|
||||
env:
|
||||
- 'IS_TESTING=1'
|
||||
timeout: 86400s
|
||||
|
||||
@@ -3,15 +3,11 @@ numpy
|
||||
jupyter
|
||||
nbconvert
|
||||
papermill
|
||||
pandas
|
||||
matplotlib
|
||||
tabulate
|
||||
google-cloud-aiplatform
|
||||
google-cloud-storage
|
||||
google-cloud-build
|
||||
google-cloud-storage
|
||||
ratemate
|
||||
GitPython
|
||||
tqdm
|
||||
fsspec
|
||||
pandas
|
||||
|
||||
GitPython
|
||||
@@ -1,40 +0,0 @@
|
||||
notebooks/official/training/pytorch_gcs_data_training.ipynb
|
||||
notebooks/official/custom/custom_training_tensorboard_profiler.ipynb
|
||||
notebooks/official/custom/custom-tabular-bq-managed-dataset.ipynb
|
||||
notebooks/official/ml_metadata/sdk-metric-parameter-tracking-for-locally-trained-models.ipynb
|
||||
notebooks/official/ml_metadata/sdk-metric-parameter-tracking-for-custom-jobs.ipynb
|
||||
notebooks/official/tabnet/tabnet_vertex_tutorial.ipynb
|
||||
notebooks/official/tabnet/get_started_with_tabnet.ipynb
|
||||
notebooks/official/pipelines/google_cloud_pipeline_components_automl_text.ipynb
|
||||
notebooks/official/pipelines/multicontender_vs_champion_deployment_method.ipynb
|
||||
notebooks/official/pipelines/google_cloud_pipeline_components_automl_images.ipynb
|
||||
notebooks/official/pipelines/rapid_prototyping_bqml_automl.ipynb
|
||||
notebooks/official/pipelines/challenger_vs_blessed_deployment_method.ipynb
|
||||
notebooks/official/matching_engine/sdk_matching_engine_create_stack_overflow_embeddings.ipynb
|
||||
notebooks/official/matching_engine/sdk_matching_engine_for_indexing.ipynb
|
||||
notebooks/official/matching_engine/sdk_matching_engine_create_text_to_image_embeddings.ipynb
|
||||
notebooks/official/explainable_ai/sdk_custom_image_classification_online_explain.ipynb
|
||||
notebooks/official/explainable_ai/xai_image_classification_feature_attributions.ipynb
|
||||
notebooks/official/explainable_ai/sdk_custom_image_classification_batch_explain.ipynb
|
||||
notebooks/official/tabular_workflows/tabnet_on_vertex_pipelines.ipynb
|
||||
notebooks/official/model_registry/get_started_with_model_registry.ipynb
|
||||
notebooks/official/model_registry/bqml_vertexai_model_registry.ipynb
|
||||
notebooks/official/sdk/SDK_Custom_Training_Python_Package_Managed_Text_Dataset_Tensorflow_Serving_Container.ipynb
|
||||
notebooks/official/model_monitoring/batch_prediction_model_monitoring.ipynb
|
||||
notebooks/official/model_monitoring/get_started_with_model_monitoring_setup.ipynb
|
||||
notebooks/official/model_monitoring/get_started_with_model_monitoring_custom.ipynb
|
||||
notebooks/official/model_monitoring/get_started_with_model_monitoring_custom_tf_serving.ipynb
|
||||
notebooks/official/model_monitoring/model_monitoring.ipynb
|
||||
notebooks/official/tensorboard/tensorboard_profiler_custom_training_with_prebuilt_container.ipynb
|
||||
notebooks/official/tensorboard/tensorboard_hyperparameter_tuning_with_hparams.ipynb
|
||||
notebooks/official/tensorboard/tensorboard_profiler_custom_training.ipynb
|
||||
notebooks/official/model_evaluation/custom_tabular_regression_model_evaluation.ipynb
|
||||
notebooks/official/model_evaluation/custom_tabular_classification_model_evaluation.ipynb
|
||||
notebooks/official/model_evaluation/automl_video_classification_model_evaluation.ipynb
|
||||
notebooks/official/experiments/comparing_local_trained_models.ipynb
|
||||
notebooks/official/automl/automl_image_classification_online_online_prediction.ipynb
|
||||
notebooks/official/automl/automl-text-classification.ipynb
|
||||
notebooks/official/automl/sdk_automl_video_object_tracking_batch.ipynb
|
||||
notebooks/official/feature_store/sdk-feature-store-pandas.ipynb
|
||||
notebooks/official/prediction/custom_batch_prediction_feature_filter.ipynb
|
||||
notebooks/official/prediction/pytorch_image_classification_with_prebuilt_serving_containers.ipynb
|
||||
@@ -2,4 +2,5 @@ notebooks/official/vizier/gapic-vizier-multi-objective-optimization.ipynb
|
||||
notebooks/official/pipelines/lightweight_functions_component_io_kfp.ipynb
|
||||
notebooks/official/ml_metadata/sdk-metric-parameter-tracking-for-locally-trained-models.ipynb
|
||||
notebooks/official/custom/custom-tabular-bq-managed-dataset.ipynb
|
||||
notebooks/official/matching_engine/sdk_matching_engine_for_indexing.ipynb
|
||||
.cloud-build/tests/python_version_test.ipynb
|
||||
|
||||
@@ -1,80 +0,0 @@
|
||||
notebooks/official/training/hyperparameter_tuning_tensorflow.ipynb
|
||||
notebooks/official/training/get_started_with_vertex_distributed_training.ipynb
|
||||
notebooks/official/training/hyperparameter_tuning_xgboost.ipynb
|
||||
notebooks/official/training/multi_node_ddp_gloo_vertex_training_with_custom_container.ipynb
|
||||
notebooks/official/training/distributed_hyperparameter_tuning.ipynb
|
||||
notebooks/official/training/pytorch-text-sentiment-classification-custom-train-deploy.ipynb
|
||||
notebooks/official/training/xgboost_data_parallel_training_on_cpu_using_dask.ipynb
|
||||
notebooks/official/training/multi_node_ddp_nccl_vertex_training_with_custom_container.ipynb
|
||||
notebooks/official/bigquery_ml/get_started_with_bqml_training.ipynb
|
||||
notebooks/official/bigquery_ml/bqml-online-prediction.ipynb
|
||||
notebooks/official/custom/custom_training_container_and_model_registry.ipynb
|
||||
notebooks/official/custom/sdk-custom-image-classification-online.ipynb
|
||||
notebooks/official/custom/sdk-custom-image-classification-batch.ipynb
|
||||
notebooks/official/custom/SDK_FBProphet_Forecasting_Online.ipynb
|
||||
notebooks/official/custom/get_started_vertex_training_xgboost.ipynb
|
||||
notebooks/official/custom/get_started_with_vertex_endpoint_and_shared_vm.ipynb
|
||||
notebooks/official/custom/SDK_Custom_Container_Prediction.ipynb
|
||||
notebooks/official/reduction_server/pytorch_distributed_training_reduction_server.ipynb
|
||||
notebooks/official/tabnet/ai-explanations-tabnet-algorithm.ipynb
|
||||
notebooks/official/vizier/get_started_vertex_vizier.ipynb
|
||||
notebooks/official/vizier/gapic-vizier-multi-objective-optimization.ipynb
|
||||
notebooks/official/pipelines/get_started_with_hpt_pipeline_components.ipynb
|
||||
notebooks/official/pipelines/google_cloud_pipeline_components_automl_tabular.ipynb
|
||||
notebooks/official/pipelines/custom_tabular_train_batch_pred_bq_pipeline.ipynb
|
||||
notebooks/official/pipelines/metrics_viz_run_compare_kfp.ipynb
|
||||
notebooks/official/pipelines/google_cloud_pipeline_components_model_upload_predict_evaluate.ipynb
|
||||
notebooks/official/pipelines/google_cloud_pipeline_components_model_train_upload_deploy.ipynb
|
||||
notebooks/official/pipelines/get_started_with_machine_management.ipynb
|
||||
notebooks/official/pipelines/custom_model_training_and_batch_prediction.ipynb
|
||||
notebooks/official/pipelines/control_flow_kfp.ipynb
|
||||
notebooks/official/pipelines/lightweight_functions_component_io_kfp.ipynb
|
||||
notebooks/official/pipelines/google_cloud_pipeline_components_bqml_text.ipynb
|
||||
notebooks/official/pipelines/pipelines_intro_kfp.ipynb
|
||||
notebooks/official/pipelines/automl_tabular_classification_beans.ipynb
|
||||
notebooks/official/pipelines/google_cloud_pipeline_components_dataproc_tabular.ipynb
|
||||
notebooks/official/explainable_ai/sdk_automl_tabular_classification_online_explain.ipynb
|
||||
notebooks/official/explainable_ai/sdk_custom_tabular_regression_online_explain.ipynb
|
||||
notebooks/official/explainable_ai/sdk_automl_tabular_binary_classification_batch_explain.ipynb
|
||||
notebooks/official/explainable_ai/sdk_custom_tabular_regression_online_explain_get_metadata.ipynb
|
||||
notebooks/official/explainable_ai/sdk_custom_tabular_regression_batch_explain.ipynb
|
||||
notebooks/official/tabular_workflows/prophet_on_vertex_pipelines.ipynb
|
||||
notebooks/official/tabular_workflows/wide_and_deep_on_vertex_pipelines.ipynb
|
||||
notebooks/official/sdk/SDK_AutoML_Video_Classification.ipynb
|
||||
notebooks/official/model_monitoring/get_started_with_model_monitoring_automl.ipynb
|
||||
notebooks/official/model_monitoring/get_started_with_model_monitoring_automl_image_batch.ipynb
|
||||
notebooks/official/model_monitoring/get_started_with_model_monitoring_automl_image_online.ipynb
|
||||
notebooks/official/model_monitoring/get_started_with_model_monitoring_xgboost.ipynb
|
||||
notebooks/official/tensorboard/tensorboard_custom_training_with_custom_container.ipynb
|
||||
notebooks/official/tensorboard/tensorboard_custom_training_with_prebuilt_container.ipynb
|
||||
notebooks/official/tensorboard/tensorboard_vertex_ai_pipelines_integration.ipynb
|
||||
notebooks/official/model_evaluation/automl_text_classification_model_evaluation.ipynb
|
||||
notebooks/official/model_evaluation/get_started_with_custom_model_evaluation_import.ipynb
|
||||
notebooks/official/model_evaluation/automl_tabular_classification_model_evaluation.ipynb
|
||||
notebooks/official/model_evaluation/automl_tabular_regression_model_evaluation.ipynb
|
||||
notebooks/official/experiments/get_started_with_vertex_experiments.ipynb
|
||||
notebooks/official/experiments/comparing_pipeline_runs.ipynb
|
||||
notebooks/official/experiments/get_started_with_vertex_experiments_autologging.ipynb
|
||||
notebooks/official/experiments/build_model_experimentation_lineage_with_prebuild_code.ipynb
|
||||
notebooks/official/experiments/delete_outdated_tensorboard_experiments.ipynb
|
||||
notebooks/official/automl/sdk_automl_tabular_regression_batch_bq.ipynb
|
||||
notebooks/official/automl/sdk_automl_text_sentiment_analysis_online.ipynb
|
||||
notebooks/official/automl/sdk_automl_text_entity_extraction_online.ipynb
|
||||
notebooks/official/automl/sdk_automl_forecasting_hierarchical_batch.ipynb
|
||||
notebooks/official/automl/automl_text_entity_extraction_batch_prediction.ipynb
|
||||
notebooks/official/automl/automl_image_classification_batch_prediction.ipynb
|
||||
notebooks/official/automl/automl_text_sentiment_analysis_batch_prediction.ipynb
|
||||
notebooks/official/automl/sdk_automl_tabular_regression_online_bq.ipynb
|
||||
notebooks/official/automl/get_started_automl_training.ipynb
|
||||
notebooks/official/automl/automl-tabular-classification.ipynb
|
||||
notebooks/official/automl/automl_image_object_detection_export_edge.ipynb
|
||||
notebooks/official/automl/sdk_automl_image_object_detection_batch.ipynb
|
||||
notebooks/official/automl/automl_tabular_on_vertex_pipelines.ipynb
|
||||
notebooks/official/automl/sdk_automl_video_classification_batch.ipynb
|
||||
notebooks/official/automl/sdk_automl_video_action_recognition_batch.ipynb
|
||||
notebooks/official/automl/sdk_automl_tabular_forecasting_batch.ipynb
|
||||
notebooks/official/automl/automl_image_object_detection_online_prediction.ipynb
|
||||
notebooks/official/automl/automl_forecasting_bqml_arima_plus_comparison.ipynb
|
||||
notebooks/official/datasets/get_started_bq_datasets.ipynb
|
||||
notebooks/official/datasets/get_started_with_data_labeling.ipynb
|
||||
notebooks/official/feature_store/feature_store_streaming_ingestion_sdk.ipynb
|
||||
@@ -1,46 +0,0 @@
|
||||
# grep PASSED tests.txt | cut -c 10-100 >passed.txt
|
||||
|
||||
import os
|
||||
|
||||
repo_dir = '/home/jupyter/vertex-ai-samples/'
|
||||
repo_dir_len = len(repo_dir)
|
||||
official_dir = repo_dir + 'notebooks/official'
|
||||
|
||||
entries = os.scandir(official_dir)
|
||||
folders = []
|
||||
for entry in entries:
|
||||
if entry.is_dir():
|
||||
folders.append(entry.path)
|
||||
|
||||
# Passing
|
||||
with open('passed.txt', 'r') as pass_file:
|
||||
notebook_names = pass_file.readlines()
|
||||
|
||||
notebooks = []
|
||||
for folder in folders:
|
||||
entries = os.scandir(folder)
|
||||
for entry in entries:
|
||||
for notebook in notebook_names:
|
||||
if entry.name == notebook.rstrip():
|
||||
notebooks.append(entry.path[repo_dir_len:])
|
||||
|
||||
with open('passing_tests.txt', 'w') as f:
|
||||
for notebook in notebooks:
|
||||
f.write(notebook + '\n')
|
||||
|
||||
|
||||
# Failing
|
||||
with open('failed.txt', 'r') as fail_file:
|
||||
notebook_names = fail_file.readlines()
|
||||
|
||||
notebooks = []
|
||||
for folder in folders:
|
||||
entries = os.scandir(folder)
|
||||
for entry in entries:
|
||||
for notebook in notebook_names:
|
||||
if entry.name == notebook.rstrip():
|
||||
notebooks.append(entry.path[repo_dir_len:])
|
||||
|
||||
with open('failing_tests.txt', 'w') as f:
|
||||
for notebook in notebooks:
|
||||
f.write(notebook + '\n')
|
||||
@@ -1,33 +0,0 @@
|
||||
import sys
|
||||
|
||||
from execute_changed_notebooks_helper import (load_results, select_notebook)
|
||||
|
||||
|
||||
def test_load_results():
|
||||
bucket: str = "cloud-build-notebooks-presubmit"
|
||||
bucket_file: str = "build_results"
|
||||
|
||||
accum = load_results(bucket, bucket_file)
|
||||
|
||||
print(accum)
|
||||
|
||||
assert len(accum) > 0
|
||||
|
||||
def test_select_notebook():
|
||||
bucket: str = "cloud-build-notebooks-presubmit"
|
||||
bucket_file: str = "build_results"
|
||||
|
||||
accum = load_results(bucket, bucket_file)
|
||||
|
||||
n_select = 0
|
||||
n_notselect = 0
|
||||
for notebook in accum:
|
||||
if select_notebook(notebook, accum, 50):
|
||||
n_select += 1
|
||||
else:
|
||||
n_notselect += 1
|
||||
|
||||
print(f"SELECTED {n_select}, NOT SELECTED {n_notselect}")
|
||||
|
||||
assert n_select > 0
|
||||
assert n_notselect > 0
|
||||
@@ -14,8 +14,6 @@
|
||||
# limitations under the License.
|
||||
|
||||
from typing import Dict
|
||||
import random
|
||||
import string
|
||||
|
||||
from nbconvert.preprocessors import Preprocessor
|
||||
|
||||
@@ -65,36 +63,3 @@ class UpdateVariablesPreprocessor(Preprocessor):
|
||||
executable_cells.append(cell)
|
||||
notebook.cells = executable_cells
|
||||
return notebook, resources
|
||||
|
||||
|
||||
# Generate a uuid of a specifed length
|
||||
def generate_uuid(length: int = 8) -> str:
|
||||
return "".join(random.choices(string.ascii_lowercase + string.digits, k=length))
|
||||
|
||||
|
||||
class UniqueStringsPreprocessor(Preprocessor):
|
||||
# A preprocessor that replaces strings that end with "-unique" or "_unique" with a uuid.
|
||||
|
||||
@staticmethod
|
||||
def update_unique_strings(content: str):
|
||||
# Replace strings that end with "-unique" or "_unique" with a uuid.
|
||||
|
||||
unique_id = generate_uuid()
|
||||
return (
|
||||
content.replace('-unique"', f'-{unique_id}"')
|
||||
.replace("-unique'", f'-{unique_id}"')
|
||||
.replace('_unique"', f'_{unique_id}"')
|
||||
.replace("_unique'", f'_{unique_id}"')
|
||||
)
|
||||
|
||||
def preprocess(self, notebook, resources=None):
|
||||
executable_cells = []
|
||||
for cell in notebook.cells:
|
||||
if cell.cell_type == "code":
|
||||
cell.source = self.update_unique_strings(
|
||||
content=cell.source,
|
||||
)
|
||||
|
||||
executable_cells.append(cell)
|
||||
notebook.cells = executable_cells
|
||||
return notebook, resources
|
||||
|
||||
@@ -40,3 +40,65 @@ def get_updated_value(content: str, variable_name: str, variable_value: str) ->
|
||||
content,
|
||||
flags=re.M,
|
||||
)
|
||||
|
||||
|
||||
def test_update_value():
|
||||
new_content = get_updated_value(
|
||||
content='asdf\nPROJECT_ID = "[your-project-id]" #@param {type:"string"} \nasdf',
|
||||
variable_name="PROJECT_ID",
|
||||
variable_value="sample-project",
|
||||
)
|
||||
assert (
|
||||
new_content
|
||||
== 'asdf\nPROJECT_ID = "sample-project" #@param {type:"string"} \nasdf'
|
||||
)
|
||||
|
||||
|
||||
def test_update_value_single_quotes():
|
||||
new_content = get_updated_value(
|
||||
content="PROJECT_ID = '[your-project-id]'",
|
||||
variable_name="PROJECT_ID",
|
||||
variable_value="sample-project",
|
||||
)
|
||||
assert new_content == "PROJECT_ID = 'sample-project'"
|
||||
|
||||
|
||||
def test_update_value_avoidance():
|
||||
new_content = get_updated_value(
|
||||
content="PROJECT_ID = shell_output[0] ",
|
||||
variable_name="PROJECT_ID",
|
||||
variable_value="sample-project",
|
||||
)
|
||||
assert new_content == "PROJECT_ID = shell_output[0] "
|
||||
|
||||
|
||||
def test_region():
|
||||
new_content = get_updated_value(
|
||||
content='REGION = "[your-region]" # @param {type:"string"}',
|
||||
variable_name="REGION",
|
||||
variable_value="us-central1",
|
||||
)
|
||||
assert new_content == 'REGION = "us-central1" # @param {type:"string"}'
|
||||
|
||||
|
||||
def test_region_equal_equals_ignore():
|
||||
# Tests that == is ignored
|
||||
new_content = get_updated_value(
|
||||
content='REGION == "[your-region]" # @param {type:"string"}',
|
||||
variable_name="REGION",
|
||||
variable_value="us-central1",
|
||||
)
|
||||
assert new_content == 'REGION == "[your-region]" # @param {type:"string"}'
|
||||
|
||||
|
||||
def test_service_account():
|
||||
# Tests that == is ignored
|
||||
new_content = get_updated_value(
|
||||
content='SERVICE_ACCOUNT = "[your-service-account]" # @param {type:"string"}',
|
||||
variable_name="SERVICE_ACCOUNT",
|
||||
variable_value="12345-compute@developer.gserviceaccount.com",
|
||||
)
|
||||
assert (
|
||||
new_content
|
||||
== 'SERVICE_ACCOUNT = "12345-compute@developer.gserviceaccount.com" # @param {type:"string"}'
|
||||
)
|
||||
|
||||
@@ -1,22 +0,0 @@
|
||||
'''
|
||||
Viewer for the weekly regression testing of the official notebooks
|
||||
|
||||
Cloud Storage location: gs://cloud-build-notebooks-presubmit/build_results/
|
||||
'''
|
||||
import argparse
|
||||
import json
|
||||
|
||||
|
||||
parser = argparse.ArgumentParser()
|
||||
parser.add_argument('--file', dest='file',
|
||||
default='build.json', type=str, help='build results file')
|
||||
import json
|
||||
|
||||
with open('build.json', 'r') as f:
|
||||
results = json.load(f)
|
||||
|
||||
for item in results.items():
|
||||
if item[1]['passed']:
|
||||
print(f"{item[0]},PASSED")
|
||||
else:
|
||||
print(f"{item[0]},FAILED")
|
||||
@@ -1,14 +0,0 @@
|
||||
from utils import NotebookProcessors
|
||||
|
||||
|
||||
def test_update_value():
|
||||
# Test that the content was updated
|
||||
preprocessor = NotebookProcessors.UniqueStringsPreprocessor()
|
||||
|
||||
content = 'PROJECT_ID = "your-project-id-unique"'
|
||||
|
||||
new_content = preprocessor.update_unique_strings(content)
|
||||
|
||||
assert new_content != content
|
||||
assert new_content.startswith('PROJECT_ID = "your-project-id-')
|
||||
assert new_content.endswith('"')
|
||||
@@ -1,63 +0,0 @@
|
||||
from utils import UpdateNotebookVariables
|
||||
|
||||
|
||||
def test_update_value():
|
||||
new_content = UpdateNotebookVariables.get_updated_value(
|
||||
content='asdf\nPROJECT_ID = "[your-project-id]" #@param {type:"string"} \nasdf',
|
||||
variable_name="PROJECT_ID",
|
||||
variable_value="sample-project",
|
||||
)
|
||||
assert (
|
||||
new_content
|
||||
== 'asdf\nPROJECT_ID = "sample-project" #@param {type:"string"} \nasdf'
|
||||
)
|
||||
|
||||
|
||||
def test_update_value_single_quotes():
|
||||
new_content = UpdateNotebookVariables.get_updated_value(
|
||||
content="PROJECT_ID = '[your-project-id]'",
|
||||
variable_name="PROJECT_ID",
|
||||
variable_value="sample-project",
|
||||
)
|
||||
assert new_content == "PROJECT_ID = 'sample-project'"
|
||||
|
||||
|
||||
def test_update_value_avoidance():
|
||||
new_content = UpdateNotebookVariables.get_updated_value(
|
||||
content="PROJECT_ID = shell_output[0] ",
|
||||
variable_name="PROJECT_ID",
|
||||
variable_value="sample-project",
|
||||
)
|
||||
assert new_content == "PROJECT_ID = shell_output[0] "
|
||||
|
||||
|
||||
def test_region():
|
||||
new_content = UpdateNotebookVariables.get_updated_value(
|
||||
content='REGION = "[your-region]" # @param {type:"string"}',
|
||||
variable_name="REGION",
|
||||
variable_value="us-central1",
|
||||
)
|
||||
assert new_content == 'REGION = "us-central1" # @param {type:"string"}'
|
||||
|
||||
|
||||
def test_region_equal_equals_ignore():
|
||||
# Tests that == is ignored
|
||||
new_content = UpdateNotebookVariables.get_updated_value(
|
||||
content='REGION == "[your-region]" # @param {type:"string"}',
|
||||
variable_name="REGION",
|
||||
variable_value="us-central1",
|
||||
)
|
||||
assert new_content == 'REGION == "[your-region]" # @param {type:"string"}'
|
||||
|
||||
|
||||
def test_service_account():
|
||||
# Tests that == is ignored
|
||||
new_content = UpdateNotebookVariables.get_updated_value(
|
||||
content='SERVICE_ACCOUNT = "[your-service-account]" # @param {type:"string"}',
|
||||
variable_name="SERVICE_ACCOUNT",
|
||||
variable_value="12345-compute@developer.gserviceaccount.com",
|
||||
)
|
||||
assert (
|
||||
new_content
|
||||
== 'SERVICE_ACCOUNT = "12345-compute@developer.gserviceaccount.com" # @param {type:"string"}'
|
||||
)
|
||||
@@ -61,7 +61,9 @@ def archive_code_and_upload(staging_bucket: str):
|
||||
|
||||
|
||||
def download_blob_into_memory(
|
||||
bucket_name: str, blob_name: str, download_as_text: Optional[bool] = False
|
||||
bucket_name: str,
|
||||
blob_name: str,
|
||||
download_as_text: Optional[bool]=False
|
||||
) -> Union[bytes, str]:
|
||||
"""
|
||||
Downloads a blob into memory as byte or as text if
|
||||
@@ -77,10 +79,13 @@ def download_blob_into_memory(
|
||||
|
||||
# Download the blob content
|
||||
if download_as_text:
|
||||
contents = blob.download_as_text()
|
||||
contents = blob.download_as_text()
|
||||
else:
|
||||
contents = blob.download_as_bytes()
|
||||
contents = blob.download_as_bytes()
|
||||
|
||||
print(f"Downloaded storage object {blob_name} from bucket {bucket_name}.")
|
||||
print(
|
||||
f"Downloaded storage object {blob_name} from bucket {bucket_name}."
|
||||
)
|
||||
|
||||
return contents
|
||||
|
||||
|
||||
@@ -1,23 +0,0 @@
|
||||
steps:
|
||||
# Fetch full repo for diff purposes
|
||||
- name: gcr.io/cloud-builders/git
|
||||
args: [fetch, --unshallow, --quiet]
|
||||
# Create a virtual environment
|
||||
- name: ${_PYTHON_IMAGE}
|
||||
entrypoint: /bin/sh
|
||||
args:
|
||||
- -c
|
||||
- python3 -m venv workspace/env
|
||||
# Install Python dependencies and run testing script
|
||||
- name: ${_PYTHON_IMAGE}
|
||||
entrypoint: /bin/sh
|
||||
args:
|
||||
- -c
|
||||
- |
|
||||
. workspace/env/bin/activate &&
|
||||
python3 notebooks/notebook_template_review.py --web --title --steps --desc --linkback --notebook-dir=notebooks/official >web.html
|
||||
artifacts:
|
||||
objects:
|
||||
location: gs://${_GCS_ARTIFACTS_BUCKET}/webdoc
|
||||
paths: ['web.html']
|
||||
timeout: 86400s
|
||||
@@ -2,9 +2,9 @@ git+https://github.com/tensorflow/docs
|
||||
ipython
|
||||
jupyter
|
||||
nbconvert
|
||||
black==23.3.0
|
||||
pyupgrade==3.7.0
|
||||
isort==5.12.0
|
||||
flake8==6.0.0
|
||||
nbqa==1.7.0
|
||||
black==22.6.0
|
||||
pyupgrade==2.34.0
|
||||
isort==5.10.1
|
||||
flake8==4.0.1
|
||||
nbqa==1.4.0
|
||||
|
||||
|
||||
@@ -84,7 +84,7 @@ if [ ${#notebooks[@]} -gt 0 ]; then
|
||||
# python3 -m nbqa black "$notebook" --check
|
||||
# BLACK_RTN=$?
|
||||
echo "Running pyupgrade..."
|
||||
python3 -m nbqa pyupgrade --exit-zero-even-if-changed "$notebook"
|
||||
python3 -m nbqa pyupgrade "$notebook"
|
||||
PYUPGRADE_RTN=$?
|
||||
echo "Running isort..."
|
||||
python3 -m nbqa isort "$notebook" --check
|
||||
@@ -97,7 +97,7 @@ if [ ${#notebooks[@]} -gt 0 ]; then
|
||||
python3 -m nbqa black "$notebook"
|
||||
BLACK_RTN=$?
|
||||
echo "Running pyupgrade..."
|
||||
python3 -m nbqa pyupgrade --exit-zero-even-if-changed "$notebook"
|
||||
python3 -m nbqa pyupgrade "$notebook"
|
||||
PYUPGRADE_RTN=$?
|
||||
echo "Running isort..."
|
||||
python3 -m nbqa isort "$notebook"
|
||||
|
||||
+5
-3
@@ -44,10 +44,12 @@ Finally, run this code block to check for errors. Each step will attempt to
|
||||
automatically fix any issues. If the fixes can't be performed automatically,
|
||||
then you will need to manually address them before submitting your PR.
|
||||
|
||||
Note: For official, only submit one notebook per PR.
|
||||
|
||||
```shell
|
||||
docker run -v ${PWD}:/setup/app gcr.io/cloud-devrel-public-resources/notebook_linter:latest your_notebook
|
||||
nbqa black "$notebook"
|
||||
nbqa pyupgrade "$notebook"
|
||||
nbqa isort "$notebook"
|
||||
nbqa flake8 "$notebook" --extend-ignore=W391,E501,F821,E402,F404,W503,E203,E722,W293,W291
|
||||
python3 -m tensorflow_docs.tools.nbfmt --remove_outputs "$notebook"
|
||||
```
|
||||
|
||||
## Code Reviews
|
||||
|
||||
@@ -6,11 +6,3 @@
|
||||
/sklearn_text_classification_from_script_using_vertex_sdk @maxhardt
|
||||
/pluto_on_workbench @wkharold
|
||||
/cpr-examples @samthrasher
|
||||
/Train_tabular_models_with_many_frameworks_and_import_to_Vertex_AI_using_Pipelines @Ark-kun
|
||||
/pipeline_components @Ark-kun
|
||||
/pipeline_components/image_ml_model_training @lakeyk
|
||||
/prediction_featurestore_integration @googleapis/vertex-prediction-team
|
||||
/vertex_vision_model_garden/model_oss/util @weigary
|
||||
/vertex_vision_model_garden/model_oss/diffusers @weigary
|
||||
/vertex_vision_model_garden/model_oss/keras @dstnluong-google
|
||||
/vertex_vision_model_garden/model_oss/transformers @dstnluong-google
|
||||
|
||||
-83
@@ -1,83 +0,0 @@
|
||||
name: Train tabular classification logistic regression model using Scikit learn pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_logistic_regression_model_using_Scikit_learn_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
||||
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
|
||||
Binarize column using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
column_name: tips
|
||||
predicate: '> 0'
|
||||
new_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":380,"width":180,"height":54}'
|
||||
Train logistic regression model using scikit learn from CSV:
|
||||
componentRef:
|
||||
digest: a864625a822e4b1c8ef6fe4ae1454fd90f15438f70a6712bb4c30e0dda4d35b7
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/cb44b75c9c062fcc40c2b905b2024b4493dbc62b/components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml
|
||||
arguments:
|
||||
dataset:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Binarize column using Pandas on CSV data
|
||||
type: CSV
|
||||
label_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":510,"width":180,"height":70}'
|
||||
Upload Scikit learn pickle model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train logistic regression model using scikit learn from CSV
|
||||
type: ScikitLearnPickleModel
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":660,"width":180,"height":70}'
|
||||
outputValues: {}
|
||||
-73
@@ -1,73 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
|
||||
train_logistic_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml")
|
||||
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_classification_logistic_regression_model_using_Scikit_learn_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
classification_label_column = "class"
|
||||
all_columns = [label_column] + feature_columns
|
||||
|
||||
training_data = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
training_data = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
# Cleaning the NaN values.
|
||||
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
replacement_value="0",
|
||||
#replacement_type_name="float",
|
||||
).outputs["transformed_table"]
|
||||
|
||||
classification_training_data = binarize_column_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
column_name=label_column,
|
||||
predicate="> 0",
|
||||
new_column_name=classification_label_column,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
model = train_logistic_regression_model_using_scikit_learn_from_CSV_op(
|
||||
dataset=classification_training_data,
|
||||
label_column_name=classification_label_column,
|
||||
# Optional:
|
||||
#penalty="l2",
|
||||
#solver="lbfgs",
|
||||
#max_iterations=100,
|
||||
#multi_class_mode="auto",
|
||||
#random_seed=0,
|
||||
).outputs["model"]
|
||||
|
||||
vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func = train_tabular_classification_logistic_regression_model_using_Scikit_learn_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-114
@@ -1,114 +0,0 @@
|
||||
name: Train tabular classification model using PyTorch pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_PyTorch_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
||||
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":140,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":250,"width":180,"height":54}'
|
||||
Create fully connected pytorch network:
|
||||
componentRef:
|
||||
digest: d03d8248fd358a0275ec33568ee7dd7dce576cc112b09dfafe2651e4d97e04a9
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
|
||||
arguments:
|
||||
input_size: '7'
|
||||
hidden_layer_sizes: '[10]'
|
||||
activation_name: elu
|
||||
output_activation_name: sigmoid
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":360,"width":180,"height":54}'
|
||||
Binarize column using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
column_name: tips
|
||||
predicate: ' > 0'
|
||||
new_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":360,"width":180,"height":54}'
|
||||
Train pytorch model from csv:
|
||||
componentRef:
|
||||
digest: 40f3185eb61e9727f41a4e0c05dd3d3b44bd802aa0f378cfc31756560033949a
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/d8c4cf5e6403bc65bcf8d606e6baf87e2528a3dc/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Create fully connected pytorch network
|
||||
type: PyTorchScriptModule
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Binarize column using Pandas on CSV data
|
||||
type: CSV
|
||||
label_column_name: class
|
||||
loss_function_name: binary_cross_entropy
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":490,"width":180,"height":40}'
|
||||
Create PyTorch Model Archive with base handler:
|
||||
componentRef:
|
||||
digest: 8298b5ee1b0f0879f893add4cf352c8dec7cf9e21bb9db134c91a2d046cdb0ec
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/46d51383e6554b7f3ab4fd8cf614d8c2b422fb22/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml
|
||||
arguments:
|
||||
Model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train pytorch model from csv
|
||||
type: PyTorchScriptModule
|
||||
Model name: model
|
||||
Model version: '1.0'
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":590,"width":180,"height":54}'
|
||||
Upload PyTorch model archive to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model_archive:
|
||||
taskOutput:
|
||||
outputName: Model archive
|
||||
taskId: Create PyTorch Model Archive with base handler
|
||||
type: PyTorchModelArchive
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":720,"width":180,"height":70}'
|
||||
outputValues: {}
|
||||
-95
@@ -1,95 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
|
||||
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
|
||||
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
|
||||
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
|
||||
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_classification_model_using_PyTorch_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
classification_label_column = "class"
|
||||
all_columns = [label_column] + feature_columns
|
||||
|
||||
training_data = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
training_data = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
# Cleaning the NaN values.
|
||||
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
replacement_value="0",
|
||||
#replacement_type_name="float",
|
||||
).outputs["transformed_table"]
|
||||
|
||||
classification_training_data = binarize_column_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
column_name=label_column,
|
||||
predicate=" > 0",
|
||||
new_column_name=classification_label_column,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
network = create_fully_connected_pytorch_network_op(
|
||||
input_size=len(feature_columns),
|
||||
# Optional:
|
||||
hidden_layer_sizes=[10],
|
||||
activation_name="elu",
|
||||
output_activation_name="sigmoid",
|
||||
# output_size=1,
|
||||
).outputs["model"]
|
||||
|
||||
model = train_pytorch_model_from_csv_op(
|
||||
model=network,
|
||||
training_data=classification_training_data,
|
||||
label_column_name=classification_label_column,
|
||||
loss_function_name="binary_cross_entropy",
|
||||
# Optional:
|
||||
#number_of_epochs=1,
|
||||
#learning_rate=0.1,
|
||||
#optimizer_name="Adadelta",
|
||||
#optimizer_parameters={},
|
||||
#batch_size=32,
|
||||
#batch_log_interval=100,
|
||||
#random_seed=0,
|
||||
).outputs["trained_model"]
|
||||
|
||||
model_archive = create_pytorch_model_archive_with_base_handler_op(
|
||||
model=model,
|
||||
# Optional:
|
||||
# model_name="model",
|
||||
# model_version="1.0",
|
||||
).outputs["Model archive"]
|
||||
|
||||
vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
|
||||
model_archive=model_archive,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func=train_tabular_classification_model_using_PyTorch_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-132
@@ -1,132 +0,0 @@
|
||||
name: Train tabular classification model using TensorFlow pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_TensorFlow_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
||||
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
|
||||
Binarize column using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
column_name: tips
|
||||
predicate: ' > 0'
|
||||
new_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":370,"width":180,"height":54}'
|
||||
Split rows into subsets:
|
||||
componentRef:
|
||||
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Binarize column using Pandas on CSV data
|
||||
type: CSV
|
||||
fraction_1: '0.8'
|
||||
annotations:
|
||||
editor.position: '{"x":170,"y":500,"width":180,"height":40}'
|
||||
Create fully connected tensorflow network:
|
||||
componentRef:
|
||||
digest: bfcafbc5ce711b1f69cabf1338212d10d50136a73db9f9f7c984de7b80b4bfb0
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
|
||||
arguments:
|
||||
input_size: '7'
|
||||
hidden_layer_sizes: '[10]'
|
||||
activation_name: elu
|
||||
output_activation_name: sigmoid
|
||||
annotations:
|
||||
editor.position: '{"x":370,"y":500,"width":180,"height":54}'
|
||||
Train model using Keras on CSV:
|
||||
componentRef:
|
||||
digest: 42ae60c889034dbad74815653e95b4f7d576b5f47f803173e8679c7b54984609
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c504a4010348c50eaaf6d4337586ccc008f4dcef/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml
|
||||
arguments:
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Create fully connected tensorflow network
|
||||
type: TensorflowSavedModel
|
||||
label_column_name: class
|
||||
loss_function_name: binary_crossentropy
|
||||
number_of_epochs: '10'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":620,"width":180,"height":54}'
|
||||
Upload Tensorflow model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 2e45263ff640b1a688e359b6936e27a81b2407749a84f340af2aa5547e0cb92c
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train model using Keras on CSV
|
||||
type: TensorflowSavedModel
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":750,"width":180,"height":54}'
|
||||
Predict with TensorFlow model on CSV data:
|
||||
componentRef:
|
||||
digest: 921bb1563e93a78233b8acceab87055b9154ccf5595d056028cf0396ca224cd4
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/59c759ce6f543184e30db6817d2a703879bc0f39/components/tensorflow/Predict/on_CSV/component.yaml
|
||||
arguments:
|
||||
dataset:
|
||||
taskOutput:
|
||||
outputName: split_2
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train model using Keras on CSV
|
||||
type: TensorflowSavedModel
|
||||
label_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":750,"width":180,"height":54}'
|
||||
outputValues: {}
|
||||
-106
@@ -1,106 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
|
||||
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
|
||||
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
|
||||
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
|
||||
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
|
||||
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_classification_model_using_TensorFlow_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
training_set_fraction = 0.8
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
classification_label_column = "class"
|
||||
all_columns = [label_column] + feature_columns
|
||||
|
||||
dataset = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
dataset = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
replacement_value="0",
|
||||
# # Optional:
|
||||
# column_names=None, # =[...]
|
||||
).outputs["transformed_table"]
|
||||
|
||||
classification_dataset = binarize_column_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
column_name=label_column,
|
||||
predicate=" > 0",
|
||||
new_column_name=classification_label_column,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
split_task = split_rows_into_subsets_op(
|
||||
table=classification_dataset,
|
||||
fraction_1=training_set_fraction,
|
||||
)
|
||||
classification_training_data = split_task.outputs["split_1"]
|
||||
classification_testing_data = split_task.outputs["split_2"]
|
||||
|
||||
network = create_fully_connected_tensorflow_network_op(
|
||||
input_size=len(feature_columns),
|
||||
# Optional:
|
||||
hidden_layer_sizes=[10],
|
||||
activation_name="elu",
|
||||
output_activation_name="sigmoid",
|
||||
# output_size=1,
|
||||
).outputs["model"]
|
||||
|
||||
model = train_model_using_Keras_on_CSV_op(
|
||||
training_data=classification_training_data,
|
||||
model=network,
|
||||
label_column_name=classification_label_column,
|
||||
# Optional:
|
||||
loss_function_name="binary_crossentropy",
|
||||
number_of_epochs=10,
|
||||
#learning_rate=0.1,
|
||||
#optimizer_name="Adadelta",
|
||||
#optimizer_parameters={},
|
||||
#batch_size=32,
|
||||
#metric_names=["mean_absolute_error"],
|
||||
#random_seed=0,
|
||||
).outputs["trained_model"]
|
||||
|
||||
predictions = predict_with_TensorFlow_model_on_CSV_data_op(
|
||||
dataset=classification_testing_data,
|
||||
model=model,
|
||||
# label_column_name needs to be set when doing prediction on a dataset that has labels
|
||||
label_column_name=classification_label_column,
|
||||
# Optional:
|
||||
# batch_size=1000,
|
||||
).outputs["predictions"]
|
||||
|
||||
vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func = train_tabular_classification_model_using_TensorFlow_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-115
@@ -1,115 +0,0 @@
|
||||
name: Train tabular classification model using XGBoost pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_XGBoost_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
||||
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
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digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
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componentRef:
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digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
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|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
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||||
Binarize column using Pandas on CSV data:
|
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componentRef:
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||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
column_name: tips
|
||||
predicate: '> 0'
|
||||
new_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":380,"width":180,"height":54}'
|
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Split rows into subsets:
|
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componentRef:
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|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Binarize column using Pandas on CSV data
|
||||
type: CSV
|
||||
fraction_1: '0.8'
|
||||
annotations:
|
||||
editor.position: '{"x":170,"y":510,"width":180,"height":40}'
|
||||
Train XGBoost model on CSV:
|
||||
componentRef:
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digest: 538c5a01eb38deaf532d619f0bbeaff4efc550fe1f0f776fc06791097b68ceac
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
|
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arguments:
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
label_column_name: class
|
||||
objective: binary:logistic
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":630,"width":180,"height":40}'
|
||||
Upload XGBoost model to Google Cloud Vertex AI:
|
||||
componentRef:
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digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
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|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train XGBoost model on CSV
|
||||
type: XGBoostModel
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":750,"width":180,"height":54}'
|
||||
Xgboost predict on CSV:
|
||||
componentRef:
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||||
arguments:
|
||||
data:
|
||||
taskOutput:
|
||||
outputName: split_2
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train XGBoost model on CSV
|
||||
type: XGBoostModel
|
||||
label_column_name: class
|
||||
annotations:
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||||
editor.position: '{"x":240,"y":750,"width":180,"height":40}'
|
||||
outputValues: {}
|
||||
-94
@@ -1,94 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
|
||||
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
|
||||
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
|
||||
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
|
||||
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_classification_model_using_XGBoost_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
training_set_fraction = 0.8
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
classification_label_column = "class"
|
||||
all_columns = [label_column] + feature_columns
|
||||
|
||||
dataset = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
dataset = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
replacement_value="0",
|
||||
# # Optional:
|
||||
# column_names=None, # =[...]
|
||||
).outputs["transformed_table"]
|
||||
|
||||
classification_dataset = binarize_column_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
column_name=label_column,
|
||||
predicate="> 0",
|
||||
new_column_name=classification_label_column,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
split_task = split_rows_into_subsets_op(
|
||||
table=classification_dataset,
|
||||
fraction_1=training_set_fraction,
|
||||
)
|
||||
classification_training_data = split_task.outputs["split_1"]
|
||||
classification_testing_data = split_task.outputs["split_2"]
|
||||
|
||||
model = train_XGBoost_model_on_CSV_op(
|
||||
training_data=classification_training_data,
|
||||
label_column_name=classification_label_column,
|
||||
objective="binary:logistic",
|
||||
# Optional:
|
||||
#starting_model=None,
|
||||
#num_iterations=10,
|
||||
#booster_params={},
|
||||
#booster="gbtree",
|
||||
#learning_rate=0.3,
|
||||
#min_split_loss=0,
|
||||
#max_depth=6,
|
||||
).outputs["model"]
|
||||
|
||||
# Predicting on the testing data
|
||||
predictions = xgboost_predict_on_CSV_op(
|
||||
data=classification_testing_data,
|
||||
model=model,
|
||||
# label_column needs to be set when doing prediction on a dataset that has labels
|
||||
label_column_name=classification_label_column,
|
||||
).outputs["predictions"]
|
||||
|
||||
vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func = train_tabular_classification_model_using_XGBoost_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-257
@@ -1,257 +0,0 @@
|
||||
name: Train tabular classification model using all frameworks pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_all_frameworks_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
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|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":550,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
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|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":550,"y":140,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
||||
componentRef:
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|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":550,"y":250,"width":180,"height":54}'
|
||||
Binarize column using Pandas on CSV data:
|
||||
componentRef:
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digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
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|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
column_name: tips
|
||||
predicate: ' > 0'
|
||||
new_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":550,"y":380,"width":180,"height":54}'
|
||||
Split rows into subsets:
|
||||
componentRef:
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digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
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|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Binarize column using Pandas on CSV data
|
||||
type: CSV
|
||||
fraction_1: '0.8'
|
||||
annotations:
|
||||
editor.position: '{"x":550,"y":490,"width":180,"height":40}'
|
||||
Create fully connected pytorch network:
|
||||
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
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arguments:
|
||||
input_size: '7'
|
||||
hidden_layer_sizes: '[10]'
|
||||
activation_name: elu
|
||||
output_activation_name: sigmoid
|
||||
annotations:
|
||||
editor.position: '{"x":380,"y":620,"width":180,"height":54}'
|
||||
Create fully connected tensorflow network:
|
||||
componentRef:
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digest: bfcafbc5ce711b1f69cabf1338212d10d50136a73db9f9f7c984de7b80b4bfb0
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
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arguments:
|
||||
input_size: '7'
|
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hidden_layer_sizes: '[10]'
|
||||
activation_name: elu
|
||||
output_activation_name: sigmoid
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":630,"width":180,"height":54}'
|
||||
Train model using Keras on CSV:
|
||||
componentRef:
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arguments:
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Create fully connected tensorflow network
|
||||
type: TensorflowSavedModel
|
||||
label_column_name: class
|
||||
loss_function_name: binary_crossentropy
|
||||
number_of_epochs: '10'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":750,"width":180,"height":54}'
|
||||
Train pytorch model from csv:
|
||||
componentRef:
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|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Create fully connected pytorch network
|
||||
type: PyTorchScriptModule
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
label_column_name: class
|
||||
loss_function_name: binary_cross_entropy
|
||||
annotations:
|
||||
editor.position: '{"x":380,"y":750,"width":180,"height":40}'
|
||||
Train XGBoost model on CSV:
|
||||
componentRef:
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arguments:
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
label_column_name: class
|
||||
objective: binary:logistic
|
||||
annotations:
|
||||
editor.position: '{"x":720,"y":750,"width":180,"height":40}'
|
||||
Train logistic regression model using scikit learn from CSV:
|
||||
componentRef:
|
||||
digest: a864625a822e4b1c8ef6fe4ae1454fd90f15438f70a6712bb4c30e0dda4d35b7
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/cb44b75c9c062fcc40c2b905b2024b4493dbc62b/components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml
|
||||
arguments:
|
||||
dataset:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
label_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":1030,"y":750,"width":180,"height":70}'
|
||||
Predict with TensorFlow model on CSV data:
|
||||
componentRef:
|
||||
digest: 921bb1563e93a78233b8acceab87055b9154ccf5595d056028cf0396ca224cd4
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/59c759ce6f543184e30db6817d2a703879bc0f39/components/tensorflow/Predict/on_CSV/component.yaml
|
||||
arguments:
|
||||
dataset:
|
||||
taskOutput:
|
||||
outputName: split_2
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train model using Keras on CSV
|
||||
type: TensorflowSavedModel
|
||||
label_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":160,"y":880,"width":180,"height":54}'
|
||||
Create PyTorch Model Archive with base handler:
|
||||
componentRef:
|
||||
digest: 8298b5ee1b0f0879f893add4cf352c8dec7cf9e21bb9db134c91a2d046cdb0ec
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/46d51383e6554b7f3ab4fd8cf614d8c2b422fb22/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml
|
||||
arguments:
|
||||
Model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train pytorch model from csv
|
||||
type: PyTorchScriptModule
|
||||
Model name: model
|
||||
Model version: '1.0'
|
||||
annotations:
|
||||
editor.position: '{"x":380,"y":880,"width":180,"height":54}'
|
||||
Xgboost predict on CSV:
|
||||
componentRef:
|
||||
digest: 0876233a0c7306fefec188bd70f059b46d1fb5aa57be231799570e3bbbdd0d95
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/4694ec97baccf59284c2a1db4aa2250c22291eab/components/XGBoost/Predict/component.yaml
|
||||
arguments:
|
||||
data:
|
||||
taskOutput:
|
||||
outputName: split_2
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train XGBoost model on CSV
|
||||
type: XGBoostModel
|
||||
label_column_name: class
|
||||
annotations:
|
||||
editor.position: '{"x":810,"y":880,"width":180,"height":40}'
|
||||
Upload Scikit learn pickle model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train logistic regression model using scikit learn from CSV
|
||||
type: ScikitLearnPickleModel
|
||||
annotations:
|
||||
editor.position: '{"x":1030,"y":880,"width":180,"height":70}'
|
||||
Upload Tensorflow model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 2e45263ff640b1a688e359b6936e27a81b2407749a84f340af2aa5547e0cb92c
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train model using Keras on CSV
|
||||
type: TensorflowSavedModel
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":1010,"width":180,"height":54}'
|
||||
Upload PyTorch model archive to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model_archive:
|
||||
taskOutput:
|
||||
outputName: Model archive
|
||||
taskId: Create PyTorch Model Archive with base handler
|
||||
type: PyTorchModelArchive
|
||||
annotations:
|
||||
editor.position: '{"x":380,"y":1010,"width":180,"height":70}'
|
||||
Upload XGBoost model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train XGBoost model on CSV
|
||||
type: XGBoostModel
|
||||
annotations:
|
||||
editor.position: '{"x":720,"y":1010,"width":180,"height":54}'
|
||||
outputValues: {}
|
||||
-224
@@ -1,224 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
|
||||
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
|
||||
|
||||
# TensorFlow
|
||||
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
|
||||
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
|
||||
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
|
||||
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
|
||||
|
||||
# PyTorch
|
||||
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
|
||||
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
|
||||
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
|
||||
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
|
||||
|
||||
# XGBoost
|
||||
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
|
||||
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
|
||||
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
|
||||
|
||||
# Scikit-learn
|
||||
#train_linear_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml")
|
||||
train_logistic_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml")
|
||||
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
|
||||
|
||||
# Vertex AI
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_classification_model_using_all_frameworks_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
training_set_fraction = 0.8
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
classification_label_column = "class"
|
||||
all_columns = [label_column] + feature_columns
|
||||
|
||||
dataset = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
dataset = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
replacement_value="0",
|
||||
# # Optional:
|
||||
# column_names=None, # =[...]
|
||||
).outputs["transformed_table"]
|
||||
|
||||
classification_dataset = binarize_column_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
column_name=label_column,
|
||||
predicate=" > 0",
|
||||
new_column_name=classification_label_column,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
split_task = split_rows_into_subsets_op(
|
||||
table=classification_dataset,
|
||||
fraction_1=training_set_fraction,
|
||||
)
|
||||
classification_training_data = split_task.outputs["split_1"]
|
||||
classification_testing_data = split_task.outputs["split_2"]
|
||||
|
||||
# TensorFlow
|
||||
tensorflow_network = create_fully_connected_tensorflow_network_op(
|
||||
input_size=len(feature_columns),
|
||||
# Optional:
|
||||
hidden_layer_sizes=[10],
|
||||
activation_name="elu",
|
||||
output_activation_name="sigmoid",
|
||||
# output_size=1,
|
||||
).outputs["model"]
|
||||
|
||||
tensorflow_model = train_model_using_Keras_on_CSV_op(
|
||||
training_data=classification_training_data,
|
||||
model=tensorflow_network,
|
||||
label_column_name=classification_label_column,
|
||||
# Optional:
|
||||
loss_function_name="binary_crossentropy",
|
||||
number_of_epochs=10,
|
||||
#learning_rate=0.1,
|
||||
#optimizer_name="Adadelta",
|
||||
#optimizer_parameters={},
|
||||
#batch_size=32,
|
||||
#metric_names=["mean_absolute_error"],
|
||||
#random_seed=0,
|
||||
).outputs["trained_model"]
|
||||
|
||||
tensorflow_predictions = predict_with_TensorFlow_model_on_CSV_data_op(
|
||||
dataset=classification_testing_data,
|
||||
model=tensorflow_model,
|
||||
# label_column_name needs to be set when doing prediction on a dataset that has labels
|
||||
label_column_name=classification_label_column,
|
||||
# Optional:
|
||||
# batch_size=1000,
|
||||
).outputs["predictions"]
|
||||
|
||||
tensorflow_vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=tensorflow_model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
tensorflow_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=tensorflow_vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
# PyTorch
|
||||
pytorch_network = create_fully_connected_pytorch_network_op(
|
||||
input_size=len(feature_columns),
|
||||
# Optional:
|
||||
hidden_layer_sizes=[10],
|
||||
activation_name="elu",
|
||||
output_activation_name="sigmoid",
|
||||
# output_size=1,
|
||||
).outputs["model"]
|
||||
|
||||
pytorch_model = train_pytorch_model_from_csv_op(
|
||||
model=pytorch_network,
|
||||
training_data=classification_training_data,
|
||||
label_column_name=classification_label_column,
|
||||
loss_function_name="binary_cross_entropy",
|
||||
# Optional:
|
||||
#number_of_epochs=1,
|
||||
#learning_rate=0.1,
|
||||
#optimizer_name="Adadelta",
|
||||
#optimizer_parameters={},
|
||||
#batch_size=32,
|
||||
#batch_log_interval=100,
|
||||
#random_seed=0,
|
||||
).outputs["trained_model"]
|
||||
|
||||
pytorch_model_archive = create_pytorch_model_archive_with_base_handler_op(
|
||||
model=pytorch_model,
|
||||
# Optional:
|
||||
# model_name="model",
|
||||
# model_version="1.0",
|
||||
).outputs["Model archive"]
|
||||
|
||||
pytorch_vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
|
||||
model_archive=pytorch_model_archive,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
pytorch_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=pytorch_vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
# XGBoost
|
||||
xgboost_model = train_XGBoost_model_on_CSV_op(
|
||||
training_data=classification_training_data,
|
||||
label_column_name=classification_label_column,
|
||||
objective="binary:logistic",
|
||||
# Optional:
|
||||
#starting_model=None,
|
||||
#num_iterations=10,
|
||||
#booster_params={},
|
||||
#booster="gbtree",
|
||||
#learning_rate=0.3,
|
||||
#min_split_loss=0,
|
||||
#max_depth=6,
|
||||
).outputs["model"]
|
||||
|
||||
# Predicting on the testing data
|
||||
xgboost_predictions = xgboost_predict_on_CSV_op(
|
||||
data=classification_testing_data,
|
||||
model=xgboost_model,
|
||||
# label_column needs to be set when doing prediction on a dataset that has labels
|
||||
label_column_name=classification_label_column,
|
||||
).outputs["predictions"]
|
||||
|
||||
xgboost_vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=xgboost_model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
xgboost_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=xgboost_vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
# Scikit-learn
|
||||
sklearn_model = train_logistic_regression_model_using_scikit_learn_from_CSV_op(
|
||||
dataset=classification_training_data,
|
||||
label_column_name=classification_label_column,
|
||||
# Optional:
|
||||
#penalty="l2",
|
||||
#solver="lbfgs",
|
||||
#max_iterations=100,
|
||||
#multi_class_mode="auto",
|
||||
#random_seed=0,
|
||||
).outputs["model"]
|
||||
|
||||
sklearn_vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=sklearn_model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=sklearn_vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func=train_tabular_classification_model_using_all_frameworks_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-68
@@ -1,68 +0,0 @@
|
||||
name: Train tabular regression linear model using Scikit learn pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_linear_model_using_Scikit_learn_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
||||
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
|
||||
Train linear regression model using scikit learn from CSV:
|
||||
componentRef:
|
||||
digest: c7fe7912ab0d1fb45d201d452e9ce6be5544e7d8c6d229db7a4b931ff58560f3
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/f807e02b54d4886c65a05f40848fd51c72407f40/components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml
|
||||
arguments:
|
||||
dataset:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":360,"width":180,"height":54}'
|
||||
Upload Scikit learn pickle model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train linear regression model using scikit learn from CSV
|
||||
type: ScikitLearnPickleModel
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":490,"width":180,"height":70}'
|
||||
outputValues: {}
|
||||
-57
@@ -1,57 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
train_linear_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml")
|
||||
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_regression_linear_model_using_Scikit_learn_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
all_columns = [label_column] + feature_columns
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
training_data = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
training_data = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
# Cleaning the NaN values.
|
||||
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
replacement_value="0",
|
||||
#replacement_type_name="float",
|
||||
).outputs["transformed_table"]
|
||||
|
||||
model = train_linear_regression_model_using_scikit_learn_from_CSV_op(
|
||||
dataset=training_data,
|
||||
label_column_name=label_column,
|
||||
).outputs["model"]
|
||||
|
||||
vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func = train_tabular_regression_linear_model_using_Scikit_learn_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-97
@@ -1,97 +0,0 @@
|
||||
name: Train tabular regression model using PyTorch pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_PyTorch_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
||||
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":130,"width":180,"height":54}'
|
||||
Create fully connected pytorch network:
|
||||
componentRef:
|
||||
digest: d03d8248fd358a0275ec33568ee7dd7dce576cc112b09dfafe2651e4d97e04a9
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
|
||||
arguments:
|
||||
input_size: '7'
|
||||
hidden_layer_sizes: '[10]'
|
||||
activation_name: elu
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":240,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":240,"width":180,"height":54}'
|
||||
Train pytorch model from csv:
|
||||
componentRef:
|
||||
digest: 40f3185eb61e9727f41a4e0c05dd3d3b44bd802aa0f378cfc31756560033949a
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/d8c4cf5e6403bc65bcf8d606e6baf87e2528a3dc/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Create fully connected pytorch network
|
||||
type: PyTorchScriptModule
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":380,"width":180,"height":40}'
|
||||
Create PyTorch Model Archive with base handler:
|
||||
componentRef:
|
||||
digest: 8298b5ee1b0f0879f893add4cf352c8dec7cf9e21bb9db134c91a2d046cdb0ec
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/46d51383e6554b7f3ab4fd8cf614d8c2b422fb22/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml
|
||||
arguments:
|
||||
Model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train pytorch model from csv
|
||||
type: PyTorchScriptModule
|
||||
Model name: model
|
||||
Model version: '1.0'
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":500,"width":180,"height":54}'
|
||||
Upload PyTorch model archive to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model_archive:
|
||||
taskOutput:
|
||||
outputName: Model archive
|
||||
taskId: Create PyTorch Model Archive with base handler
|
||||
type: PyTorchModelArchive
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":630,"width":180,"height":70}'
|
||||
outputValues: {}
|
||||
-85
@@ -1,85 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
|
||||
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
|
||||
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
|
||||
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_regression_model_using_PyTorch_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
all_columns = [label_column] + feature_columns
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
training_data = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
training_data = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
# Cleaning the NaN values.
|
||||
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=training_data,
|
||||
replacement_value="0",
|
||||
#replacement_type_name="float",
|
||||
).outputs["transformed_table"]
|
||||
|
||||
network = create_fully_connected_pytorch_network_op(
|
||||
input_size=len(feature_columns),
|
||||
# Optional:
|
||||
hidden_layer_sizes=[10],
|
||||
activation_name="elu",
|
||||
# output_activation_name=None,
|
||||
# output_size=1,
|
||||
).outputs["model"]
|
||||
|
||||
model = train_pytorch_model_from_csv_op(
|
||||
model=network,
|
||||
training_data=training_data,
|
||||
label_column_name=label_column,
|
||||
# Optional:
|
||||
#loss_function_name="mse_loss",
|
||||
#number_of_epochs=1,
|
||||
#learning_rate=0.1,
|
||||
#optimizer_name="Adadelta",
|
||||
#optimizer_parameters={},
|
||||
#batch_size=32,
|
||||
#batch_log_interval=100,
|
||||
#random_seed=0,
|
||||
).outputs["trained_model"]
|
||||
|
||||
model_archive = create_pytorch_model_archive_with_base_handler_op(
|
||||
model=model,
|
||||
# Optional:
|
||||
# model_name="model",
|
||||
# model_version="1.0",
|
||||
).outputs["Model archive"]
|
||||
|
||||
vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
|
||||
model_archive=model_archive,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func=train_tabular_regression_model_using_PyTorch_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-116
@@ -1,116 +0,0 @@
|
||||
name: Train tabular regression model using Tensorflow pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_TensorFlow_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
||||
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
|
||||
Split rows into subsets:
|
||||
componentRef:
|
||||
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
fraction_1: '0.8'
|
||||
annotations:
|
||||
editor.position: '{"x":170,"y":380,"width":180,"height":40}'
|
||||
Create fully connected tensorflow network:
|
||||
componentRef:
|
||||
digest: bfcafbc5ce711b1f69cabf1338212d10d50136a73db9f9f7c984de7b80b4bfb0
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
|
||||
arguments:
|
||||
input_size: '7'
|
||||
hidden_layer_sizes: '[10]'
|
||||
activation_name: elu
|
||||
annotations:
|
||||
editor.position: '{"x":370,"y":380,"width":180,"height":54}'
|
||||
Train model using Keras on CSV:
|
||||
componentRef:
|
||||
digest: 42ae60c889034dbad74815653e95b4f7d576b5f47f803173e8679c7b54984609
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c504a4010348c50eaaf6d4337586ccc008f4dcef/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml
|
||||
arguments:
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Create fully connected tensorflow network
|
||||
type: TensorflowSavedModel
|
||||
label_column_name: tips
|
||||
number_of_epochs: '10'
|
||||
metric_names: '["mean_absolute_error"]'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":500,"width":180,"height":54}'
|
||||
Upload Tensorflow model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 2e45263ff640b1a688e359b6936e27a81b2407749a84f340af2aa5547e0cb92c
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train model using Keras on CSV
|
||||
type: TensorflowSavedModel
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":630,"width":180,"height":54}'
|
||||
Predict with TensorFlow model on CSV data:
|
||||
componentRef:
|
||||
digest: 921bb1563e93a78233b8acceab87055b9154ccf5595d056028cf0396ca224cd4
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/59c759ce6f543184e30db6817d2a703879bc0f39/components/tensorflow/Predict/on_CSV/component.yaml
|
||||
arguments:
|
||||
dataset:
|
||||
taskOutput:
|
||||
outputName: split_2
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train model using Keras on CSV
|
||||
type: TensorflowSavedModel
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":630,"width":180,"height":54}'
|
||||
outputValues: {}
|
||||
-97
@@ -1,97 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
|
||||
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
|
||||
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
|
||||
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
|
||||
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_regression_model_using_Tensorflow_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
training_set_fraction = 0.8
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
all_columns = [label_column] + feature_columns
|
||||
|
||||
dataset = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
dataset = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
replacement_value="0",
|
||||
# # Optional:
|
||||
# column_names=None, # =[...]
|
||||
).outputs["transformed_table"]
|
||||
|
||||
split_task = split_rows_into_subsets_op(
|
||||
table=dataset,
|
||||
fraction_1=training_set_fraction,
|
||||
)
|
||||
training_data = split_task.outputs["split_1"]
|
||||
testing_data = split_task.outputs["split_2"]
|
||||
|
||||
network = create_fully_connected_tensorflow_network_op(
|
||||
input_size=len(feature_columns),
|
||||
# Optional:
|
||||
hidden_layer_sizes=[10],
|
||||
activation_name="elu",
|
||||
# output_activation_name=None,
|
||||
# output_size=1,
|
||||
).outputs["model"]
|
||||
|
||||
model = train_model_using_Keras_on_CSV_op(
|
||||
training_data=training_data,
|
||||
model=network,
|
||||
label_column_name=label_column,
|
||||
# Optional:
|
||||
#loss_function_name="mean_squared_error",
|
||||
number_of_epochs=10,
|
||||
#learning_rate=0.1,
|
||||
#optimizer_name="Adadelta",
|
||||
#optimizer_parameters={},
|
||||
#batch_size=32,
|
||||
metric_names=["mean_absolute_error"],
|
||||
#random_seed=0,
|
||||
).outputs["trained_model"]
|
||||
|
||||
predictions = predict_with_TensorFlow_model_on_CSV_data_op(
|
||||
dataset=testing_data,
|
||||
model=model,
|
||||
# label_column_name needs to be set when doing prediction on a dataset that has labels
|
||||
label_column_name=label_column,
|
||||
# Optional:
|
||||
# batch_size=1000,
|
||||
).outputs["predictions"]
|
||||
|
||||
vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func=train_tabular_regression_model_using_Tensorflow_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-99
@@ -1,99 +0,0 @@
|
||||
name: Train tabular regression model using XGBoost pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_XGBoost_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
||||
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
|
||||
Split rows into subsets:
|
||||
componentRef:
|
||||
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
fraction_1: '0.8'
|
||||
annotations:
|
||||
editor.position: '{"x":170,"y":360,"width":180,"height":40}'
|
||||
Train XGBoost model on CSV:
|
||||
componentRef:
|
||||
digest: 538c5a01eb38deaf532d619f0bbeaff4efc550fe1f0f776fc06791097b68ceac
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
|
||||
arguments:
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":480,"width":180,"height":40}'
|
||||
Upload XGBoost model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train XGBoost model on CSV
|
||||
type: XGBoostModel
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":600,"width":180,"height":54}'
|
||||
Xgboost predict on CSV:
|
||||
componentRef:
|
||||
digest: 0876233a0c7306fefec188bd70f059b46d1fb5aa57be231799570e3bbbdd0d95
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/4694ec97baccf59284c2a1db4aa2250c22291eab/components/XGBoost/Predict/component.yaml
|
||||
arguments:
|
||||
data:
|
||||
taskOutput:
|
||||
outputName: split_2
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train XGBoost model on CSV
|
||||
type: XGBoostModel
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":240,"y":600,"width":180,"height":40}'
|
||||
outputValues: {}
|
||||
-85
@@ -1,85 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
|
||||
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
|
||||
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
|
||||
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_regression_model_using_XGBoost_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
training_set_fraction = 0.8
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
all_columns = [label_column] + feature_columns
|
||||
|
||||
dataset = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
dataset = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
replacement_value="0",
|
||||
# # Optional:
|
||||
# column_names=None, # =[...]
|
||||
).outputs["transformed_table"]
|
||||
|
||||
split_task = split_rows_into_subsets_op(
|
||||
table=dataset,
|
||||
fraction_1=training_set_fraction,
|
||||
)
|
||||
training_data = split_task.outputs["split_1"]
|
||||
testing_data = split_task.outputs["split_2"]
|
||||
|
||||
model = train_XGBoost_model_on_CSV_op(
|
||||
training_data=training_data,
|
||||
label_column_name=label_column,
|
||||
# Optional:
|
||||
#starting_model=None,
|
||||
#num_iterations=10,
|
||||
#booster_params={},
|
||||
#objective="reg:squarederror",
|
||||
#booster="gbtree",
|
||||
#learning_rate=0.3,
|
||||
#min_split_loss=0,
|
||||
#max_depth=6,
|
||||
).outputs["model"]
|
||||
|
||||
# Predicting on the testing data
|
||||
predictions = xgboost_predict_on_CSV_op(
|
||||
data=testing_data,
|
||||
model=model,
|
||||
# label_column needs to be set when doing prediction on a dataset that has labels
|
||||
label_column_name=label_column,
|
||||
).outputs["predictions"]
|
||||
|
||||
vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func = train_tabular_regression_model_using_XGBoost_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-238
@@ -1,238 +0,0 @@
|
||||
name: Train tabular regression model using all frameworks pipeline
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_all_frameworks_and_import_to_Vertex_AI/pipeline.component.yaml
|
||||
sdk: https://cloud-pipelines.net/pipeline-editor/
|
||||
implementation:
|
||||
graph:
|
||||
tasks:
|
||||
Download from GCS:
|
||||
componentRef:
|
||||
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
|
||||
annotations:
|
||||
editor.position: '{"x":550,"y":40,"width":180,"height":40}'
|
||||
Select columns using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
|
||||
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|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: Data
|
||||
taskId: Download from GCS
|
||||
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
|
||||
annotations:
|
||||
editor.position: '{"x":550,"y":140,"width":180,"height":54}'
|
||||
Fill all missing values using Pandas on CSV data:
|
||||
componentRef:
|
||||
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
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||||
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|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Select columns using Pandas on CSV data
|
||||
type: CSV
|
||||
replacement_value: '0'
|
||||
annotations:
|
||||
editor.position: '{"x":550,"y":250,"width":180,"height":54}'
|
||||
Split rows into subsets:
|
||||
componentRef:
|
||||
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
|
||||
arguments:
|
||||
table:
|
||||
taskOutput:
|
||||
outputName: transformed_table
|
||||
taskId: Fill all missing values using Pandas on CSV data
|
||||
type: CSV
|
||||
fraction_1: '0.8'
|
||||
annotations:
|
||||
editor.position: '{"x":550,"y":360,"width":180,"height":40}'
|
||||
Create fully connected pytorch network:
|
||||
componentRef:
|
||||
digest: d03d8248fd358a0275ec33568ee7dd7dce576cc112b09dfafe2651e4d97e04a9
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
|
||||
arguments:
|
||||
input_size: '7'
|
||||
hidden_layer_sizes: '[10]'
|
||||
activation_name: elu
|
||||
annotations:
|
||||
editor.position: '{"x":380,"y":490,"width":180,"height":54}'
|
||||
Create fully connected tensorflow network:
|
||||
componentRef:
|
||||
digest: bfcafbc5ce711b1f69cabf1338212d10d50136a73db9f9f7c984de7b80b4bfb0
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
|
||||
arguments:
|
||||
input_size: '7'
|
||||
hidden_layer_sizes: '[10]'
|
||||
activation_name: elu
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":500,"width":180,"height":54}'
|
||||
Train model using Keras on CSV:
|
||||
componentRef:
|
||||
digest: 42ae60c889034dbad74815653e95b4f7d576b5f47f803173e8679c7b54984609
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c504a4010348c50eaaf6d4337586ccc008f4dcef/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml
|
||||
arguments:
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Create fully connected tensorflow network
|
||||
type: TensorflowSavedModel
|
||||
label_column_name: tips
|
||||
number_of_epochs: '10'
|
||||
metric_names: '["mean_absolute_error"]'
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":620,"width":180,"height":54}'
|
||||
Train pytorch model from csv:
|
||||
componentRef:
|
||||
digest: 40f3185eb61e9727f41a4e0c05dd3d3b44bd802aa0f378cfc31756560033949a
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/d8c4cf5e6403bc65bcf8d606e6baf87e2528a3dc/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Create fully connected pytorch network
|
||||
type: PyTorchScriptModule
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":380,"y":620,"width":180,"height":40}'
|
||||
Train XGBoost model on CSV:
|
||||
componentRef:
|
||||
digest: 538c5a01eb38deaf532d619f0bbeaff4efc550fe1f0f776fc06791097b68ceac
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
|
||||
arguments:
|
||||
training_data:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":720,"y":620,"width":180,"height":40}'
|
||||
Train linear regression model using scikit learn from CSV:
|
||||
componentRef:
|
||||
digest: c7fe7912ab0d1fb45d201d452e9ce6be5544e7d8c6d229db7a4b931ff58560f3
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/f807e02b54d4886c65a05f40848fd51c72407f40/components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml
|
||||
arguments:
|
||||
dataset:
|
||||
taskOutput:
|
||||
outputName: split_1
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":1030,"y":620,"width":180,"height":54}'
|
||||
Predict with TensorFlow model on CSV data:
|
||||
componentRef:
|
||||
digest: 921bb1563e93a78233b8acceab87055b9154ccf5595d056028cf0396ca224cd4
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/59c759ce6f543184e30db6817d2a703879bc0f39/components/tensorflow/Predict/on_CSV/component.yaml
|
||||
arguments:
|
||||
dataset:
|
||||
taskOutput:
|
||||
outputName: split_2
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train model using Keras on CSV
|
||||
type: TensorflowSavedModel
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":160,"y":750,"width":180,"height":54}'
|
||||
Create PyTorch Model Archive with base handler:
|
||||
componentRef:
|
||||
digest: 8298b5ee1b0f0879f893add4cf352c8dec7cf9e21bb9db134c91a2d046cdb0ec
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/46d51383e6554b7f3ab4fd8cf614d8c2b422fb22/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml
|
||||
arguments:
|
||||
Model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train pytorch model from csv
|
||||
type: PyTorchScriptModule
|
||||
Model name: model
|
||||
Model version: '1.0'
|
||||
annotations:
|
||||
editor.position: '{"x":380,"y":750,"width":180,"height":54}'
|
||||
Xgboost predict on CSV:
|
||||
componentRef:
|
||||
digest: 0876233a0c7306fefec188bd70f059b46d1fb5aa57be231799570e3bbbdd0d95
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/4694ec97baccf59284c2a1db4aa2250c22291eab/components/XGBoost/Predict/component.yaml
|
||||
arguments:
|
||||
data:
|
||||
taskOutput:
|
||||
outputName: split_2
|
||||
taskId: Split rows into subsets
|
||||
type: CSV
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train XGBoost model on CSV
|
||||
type: XGBoostModel
|
||||
label_column_name: tips
|
||||
annotations:
|
||||
editor.position: '{"x":810,"y":750,"width":180,"height":40}'
|
||||
Upload Scikit learn pickle model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train linear regression model using scikit learn from CSV
|
||||
type: ScikitLearnPickleModel
|
||||
annotations:
|
||||
editor.position: '{"x":1030,"y":750,"width":180,"height":70}'
|
||||
Upload Tensorflow model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 2e45263ff640b1a688e359b6936e27a81b2407749a84f340af2aa5547e0cb92c
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: trained_model
|
||||
taskId: Train model using Keras on CSV
|
||||
type: TensorflowSavedModel
|
||||
annotations:
|
||||
editor.position: '{"x":40,"y":880,"width":180,"height":54}'
|
||||
Upload PyTorch model archive to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model_archive:
|
||||
taskOutput:
|
||||
outputName: Model archive
|
||||
taskId: Create PyTorch Model Archive with base handler
|
||||
type: PyTorchModelArchive
|
||||
annotations:
|
||||
editor.position: '{"x":380,"y":880,"width":180,"height":70}'
|
||||
Upload XGBoost model to Google Cloud Vertex AI:
|
||||
componentRef:
|
||||
digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
|
||||
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
|
||||
arguments:
|
||||
model:
|
||||
taskOutput:
|
||||
outputName: model
|
||||
taskId: Train XGBoost model on CSV
|
||||
type: XGBoostModel
|
||||
annotations:
|
||||
editor.position: '{"x":720,"y":880,"width":180,"height":54}'
|
||||
outputValues: {}
|
||||
-208
@@ -1,208 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
|
||||
# %% Loading components
|
||||
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
|
||||
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
|
||||
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
|
||||
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
|
||||
|
||||
# TensorFlow
|
||||
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
|
||||
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
|
||||
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
|
||||
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
|
||||
|
||||
# PyTorch
|
||||
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
|
||||
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
|
||||
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
|
||||
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
|
||||
|
||||
# XGBoost
|
||||
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
|
||||
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
|
||||
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
|
||||
|
||||
# Scikit-learn
|
||||
train_linear_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml")
|
||||
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
|
||||
|
||||
# Vertex AI
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
|
||||
|
||||
# %% Pipeline definition
|
||||
def train_tabular_regression_model_using_all_frameworks_pipeline():
|
||||
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
|
||||
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
|
||||
label_column = "tips"
|
||||
training_set_fraction = 0.8
|
||||
# Deploying the model might incur additional costs over time
|
||||
deploy_model = False
|
||||
|
||||
all_columns = [label_column] + feature_columns
|
||||
|
||||
dataset = download_from_gcs_op(
|
||||
gcs_path=dataset_gcs_uri
|
||||
).outputs["Data"]
|
||||
|
||||
dataset = select_columns_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
column_names=all_columns,
|
||||
).outputs["transformed_table"]
|
||||
|
||||
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
|
||||
table=dataset,
|
||||
replacement_value="0",
|
||||
# # Optional:
|
||||
# column_names=None, # =[...]
|
||||
).outputs["transformed_table"]
|
||||
|
||||
split_task = split_rows_into_subsets_op(
|
||||
table=dataset,
|
||||
fraction_1=training_set_fraction,
|
||||
)
|
||||
training_data = split_task.outputs["split_1"]
|
||||
testing_data = split_task.outputs["split_2"]
|
||||
|
||||
# TensorFlow
|
||||
tensorflow_network = create_fully_connected_tensorflow_network_op(
|
||||
input_size=len(feature_columns),
|
||||
# Optional:
|
||||
hidden_layer_sizes=[10],
|
||||
activation_name="elu",
|
||||
# output_activation_name=None,
|
||||
# output_size=1,
|
||||
).outputs["model"]
|
||||
|
||||
tensorflow_model = train_model_using_Keras_on_CSV_op(
|
||||
training_data=training_data,
|
||||
model=tensorflow_network,
|
||||
label_column_name=label_column,
|
||||
# Optional:
|
||||
#loss_function_name="mean_squared_error",
|
||||
number_of_epochs=10,
|
||||
#learning_rate=0.1,
|
||||
#optimizer_name="Adadelta",
|
||||
#optimizer_parameters={},
|
||||
#batch_size=32,
|
||||
metric_names=["mean_absolute_error"],
|
||||
#random_seed=0,
|
||||
).outputs["trained_model"]
|
||||
|
||||
tensorflow_predictions = predict_with_TensorFlow_model_on_CSV_data_op(
|
||||
dataset=testing_data,
|
||||
model=tensorflow_model,
|
||||
# label_column_name needs to be set when doing prediction on a dataset that has labels
|
||||
label_column_name=label_column,
|
||||
# Optional:
|
||||
# batch_size=1000,
|
||||
).outputs["predictions"]
|
||||
|
||||
tensorflow_vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=tensorflow_model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
tensorflow_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=tensorflow_vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
# PyTorch
|
||||
pytorch_network = create_fully_connected_pytorch_network_op(
|
||||
input_size=len(feature_columns),
|
||||
# Optional:
|
||||
hidden_layer_sizes=[10],
|
||||
activation_name="elu",
|
||||
# output_activation_name=None,
|
||||
# output_size=1,
|
||||
).outputs["model"]
|
||||
|
||||
pytorch_model = train_pytorch_model_from_csv_op(
|
||||
model=pytorch_network,
|
||||
training_data=training_data,
|
||||
label_column_name=label_column,
|
||||
# Optional:
|
||||
#loss_function_name="mse_loss",
|
||||
#number_of_epochs=1,
|
||||
#learning_rate=0.1,
|
||||
#optimizer_name="Adadelta",
|
||||
#optimizer_parameters={},
|
||||
#batch_size=32,
|
||||
#batch_log_interval=100,
|
||||
#random_seed=0,
|
||||
).outputs["trained_model"]
|
||||
|
||||
pytorch_model_archive = create_pytorch_model_archive_with_base_handler_op(
|
||||
model=pytorch_model,
|
||||
# Optional:
|
||||
# model_name="model",
|
||||
# model_version="1.0",
|
||||
).outputs["Model archive"]
|
||||
|
||||
pytorch_vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
|
||||
model_archive=pytorch_model_archive,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
pytorch_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=pytorch_vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
# XGBoost
|
||||
xgboost_model = train_XGBoost_model_on_CSV_op(
|
||||
training_data=training_data,
|
||||
label_column_name=label_column,
|
||||
# Optional:
|
||||
#starting_model=None,
|
||||
#num_iterations=10,
|
||||
#booster_params={},
|
||||
#objective="reg:squarederror",
|
||||
#booster="gbtree",
|
||||
#learning_rate=0.3,
|
||||
#min_split_loss=0,
|
||||
#max_depth=6,
|
||||
).outputs["model"]
|
||||
|
||||
# Predicting on the testing data
|
||||
xgboost_predictions = xgboost_predict_on_CSV_op(
|
||||
data=testing_data,
|
||||
model=xgboost_model,
|
||||
# label_column needs to be set when doing prediction on a dataset that has labels
|
||||
label_column_name=label_column,
|
||||
).outputs["predictions"]
|
||||
|
||||
xgboost_vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=xgboost_model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
xgboost_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=xgboost_vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
# Scikit-learn
|
||||
sklearn_model = train_linear_regression_model_using_scikit_learn_from_CSV_op(
|
||||
dataset=training_data,
|
||||
label_column_name=label_column,
|
||||
).outputs["model"]
|
||||
|
||||
sklearn_vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=sklearn_model,
|
||||
).outputs["model_name"]
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=sklearn_vertex_model_name,
|
||||
).outputs["endpoint_name"]
|
||||
|
||||
pipeline_func=train_tabular_regression_model_using_all_frameworks_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-64
@@ -1,64 +0,0 @@
|
||||
name: Train linear regression model using scikit learn from CSV
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml'}
|
||||
inputs:
|
||||
- {name: dataset, type: CSV}
|
||||
- {name: label_column_name, type: String}
|
||||
outputs:
|
||||
- {name: model, type: ScikitLearnPickleModel}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'scikit-learn==1.0.2' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
|
||||
-m pip install --quiet --no-warn-script-location 'scikit-learn==1.0.2' 'pandas==1.4.3'
|
||||
--user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def train_linear_regression_model_using_scikit_learn_from_CSV(
|
||||
dataset_path,
|
||||
model_path,
|
||||
label_column_name,
|
||||
):
|
||||
import pandas
|
||||
import pickle
|
||||
from sklearn import linear_model
|
||||
|
||||
df = pandas.read_csv(dataset_path)
|
||||
model = linear_model.LinearRegression()
|
||||
model.fit(
|
||||
X=df.drop(columns=label_column_name),
|
||||
y=df[label_column_name],
|
||||
)
|
||||
|
||||
with open(model_path, "wb") as f:
|
||||
pickle.dump(model, f)
|
||||
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Train linear regression model using scikit learn from CSV', description='')
|
||||
_parser.add_argument("--dataset", dest="dataset_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = train_linear_regression_model_using_scikit_learn_from_CSV(**_parsed_args)
|
||||
args:
|
||||
- --dataset
|
||||
- {inputPath: dataset}
|
||||
- --label-column-name
|
||||
- {inputValue: label_column_name}
|
||||
- --model
|
||||
- {outputPath: model}
|
||||
-163
@@ -1,163 +0,0 @@
|
||||
name: Train logistic regression model using scikit learn from CSV
|
||||
description: Train logistic regression model using Scikit-learn
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml'}
|
||||
inputs:
|
||||
- {name: dataset, type: CSV}
|
||||
- {name: label_column_name, type: String}
|
||||
- {name: penalty, type: String, default: l2, optional: true}
|
||||
- {name: solver, type: String, default: lbfgs, optional: true}
|
||||
- {name: max_iterations, type: Integer, default: '100', optional: true}
|
||||
- {name: multi_class_mode, type: String, default: auto, optional: true}
|
||||
- {name: random_seed, type: Integer, default: '0', optional: true}
|
||||
outputs:
|
||||
- {name: model, type: ScikitLearnPickleModel}
|
||||
- {name: model_parameters, type: JsonObject}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'scikit-learn==1.0.2' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
|
||||
-m pip install --quiet --no-warn-script-location 'scikit-learn==1.0.2' 'pandas==1.4.3'
|
||||
--user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def train_logistic_regression_model_using_scikit_learn_from_CSV(
|
||||
dataset_path,
|
||||
model_path,
|
||||
label_column_name,
|
||||
penalty = "l2", # l1, l2, elasticnet, none
|
||||
solver = "lbfgs", # newton-cg, lbfgs, liblinear, sag, saga
|
||||
max_iterations = 100,
|
||||
multi_class_mode = "auto", # auto, ovr, multinomial
|
||||
random_seed = 0,
|
||||
):
|
||||
"""Train logistic regression model using Scikit-learn
|
||||
|
||||
See https://scikit-learn.org/stable/modules/generated/sklearn.linear_model.LogisticRegression.html
|
||||
"""
|
||||
import json
|
||||
import pandas
|
||||
import pickle
|
||||
from sklearn import linear_model
|
||||
|
||||
df = pandas.read_csv(dataset_path)
|
||||
model = linear_model.LogisticRegression(
|
||||
penalty=penalty,
|
||||
#dual=False,
|
||||
#tol=1e-4,
|
||||
#C=1.0,
|
||||
#fit_intercept=True,
|
||||
#intercept_scaling=1,
|
||||
#class_weight=None,
|
||||
random_state=random_seed,
|
||||
solver=solver,
|
||||
max_iter=max_iterations,
|
||||
multi_class=multi_class_mode,
|
||||
#l1_ratio=None,
|
||||
verbose=1,
|
||||
)
|
||||
|
||||
model_parameters = model.get_params()
|
||||
model_parameters_json = json.dumps(model_parameters, indent=2)
|
||||
print("Model parameters:")
|
||||
print(model_parameters_json)
|
||||
print()
|
||||
|
||||
model.fit(
|
||||
X=df.drop(columns=label_column_name),
|
||||
y=df[label_column_name],
|
||||
)
|
||||
|
||||
with open(model_path, "wb") as f:
|
||||
pickle.dump(model, f)
|
||||
|
||||
return (model_parameters_json,)
|
||||
|
||||
def _serialize_json(obj) -> str:
|
||||
if isinstance(obj, str):
|
||||
return obj
|
||||
import json
|
||||
def default_serializer(obj):
|
||||
if hasattr(obj, 'to_struct'):
|
||||
return obj.to_struct()
|
||||
else:
|
||||
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
|
||||
return json.dumps(obj, default=default_serializer, sort_keys=True)
|
||||
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Train logistic regression model using scikit learn from CSV', description='Train logistic regression model using Scikit-learn')
|
||||
_parser.add_argument("--dataset", dest="dataset_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--penalty", dest="penalty", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--solver", dest="solver", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--max-iterations", dest="max_iterations", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--multi-class-mode", dest="multi_class_mode", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=1)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
_output_files = _parsed_args.pop("_output_paths", [])
|
||||
|
||||
_outputs = train_logistic_regression_model_using_scikit_learn_from_CSV(**_parsed_args)
|
||||
|
||||
_output_serializers = [
|
||||
_serialize_json,
|
||||
|
||||
]
|
||||
|
||||
import os
|
||||
for idx, output_file in enumerate(_output_files):
|
||||
try:
|
||||
os.makedirs(os.path.dirname(output_file))
|
||||
except OSError:
|
||||
pass
|
||||
with open(output_file, 'w') as f:
|
||||
f.write(_output_serializers[idx](_outputs[idx]))
|
||||
args:
|
||||
- --dataset
|
||||
- {inputPath: dataset}
|
||||
- --label-column-name
|
||||
- {inputValue: label_column_name}
|
||||
- if:
|
||||
cond: {isPresent: penalty}
|
||||
then:
|
||||
- --penalty
|
||||
- {inputValue: penalty}
|
||||
- if:
|
||||
cond: {isPresent: solver}
|
||||
then:
|
||||
- --solver
|
||||
- {inputValue: solver}
|
||||
- if:
|
||||
cond: {isPresent: max_iterations}
|
||||
then:
|
||||
- --max-iterations
|
||||
- {inputValue: max_iterations}
|
||||
- if:
|
||||
cond: {isPresent: multi_class_mode}
|
||||
then:
|
||||
- --multi-class-mode
|
||||
- {inputValue: multi_class_mode}
|
||||
- if:
|
||||
cond: {isPresent: random_seed}
|
||||
then:
|
||||
- --random-seed
|
||||
- {inputValue: random_seed}
|
||||
- --model
|
||||
- {outputPath: model}
|
||||
- '----output-paths'
|
||||
- {outputPath: model_parameters}
|
||||
-41
@@ -1,41 +0,0 @@
|
||||
name: Create PyTorch Model Archive with base handler
|
||||
inputs:
|
||||
- {name: Model, type: PyTorchScriptModule}
|
||||
- {name: Model name, type: String, default: model}
|
||||
- {name: Model version, type: String, default: "1.0"}
|
||||
outputs:
|
||||
- {name: Model archive, type: PyTorchModelArchive}
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml'
|
||||
implementation:
|
||||
container:
|
||||
image: pytorch/torchserve:0.6.0-cpu
|
||||
command:
|
||||
- bash
|
||||
- -exc
|
||||
- |
|
||||
model_path=$0
|
||||
model_name=$1
|
||||
model_version=$2
|
||||
output_model_archive_path=$3
|
||||
|
||||
mkdir -p "$(dirname "$output_model_archive_path")"
|
||||
|
||||
# TODO: Use the built-in base_handler once my fix is merged: https://github.com/pytorch/serve/pull/1682
|
||||
echo '
|
||||
from ts.torch_handler import base_handler
|
||||
class BaseHandler(base_handler.BaseHandler):
|
||||
pass
|
||||
' > base_handler.py # torch-model-archiver needs the handler to have .py extension
|
||||
torch-model-archiver --model-name "$model_name" --version "$model_version" --serialized-file "$model_path" --handler base_handler.py
|
||||
|
||||
# torch-model-archiver does not allow specifying the output path, but always writes to "${model_name}.<format>"
|
||||
expected_model_archive_path="${model_name}.mar"
|
||||
mv "$expected_model_archive_path" "$output_model_archive_path"
|
||||
|
||||
- {inputPath: Model}
|
||||
- {inputValue: Model name}
|
||||
- {inputValue: Model version}
|
||||
- {outputPath: Model archive}
|
||||
-117
@@ -1,117 +0,0 @@
|
||||
name: Create fully connected pytorch network
|
||||
description: Creates fully-connected network in PyTorch ScriptModule format
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/PyTorch/Create_fully_connected_network/component.yaml'}
|
||||
inputs:
|
||||
- {name: input_size, type: Integer}
|
||||
- {name: hidden_layer_sizes, type: JsonArray, default: '[]', optional: true}
|
||||
- {name: output_size, type: Integer, default: '1', optional: true}
|
||||
- {name: activation_name, type: String, default: relu, optional: true}
|
||||
- {name: output_activation_name, type: String, optional: true}
|
||||
- {name: random_seed, type: Integer, default: '0', optional: true}
|
||||
outputs:
|
||||
- {name: model, type: PyTorchScriptModule}
|
||||
implementation:
|
||||
container:
|
||||
image: pytorch/pytorch:1.7.1-cuda11.0-cudnn8-runtime
|
||||
command:
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def create_fully_connected_pytorch_network(
|
||||
input_size,
|
||||
model_path,
|
||||
hidden_layer_sizes = [],
|
||||
output_size = 1,
|
||||
activation_name = 'relu',
|
||||
output_activation_name = None,
|
||||
random_seed = 0,
|
||||
):
|
||||
'''Creates fully-connected network in PyTorch ScriptModule format'''
|
||||
import torch
|
||||
torch.manual_seed(random_seed)
|
||||
|
||||
activation = getattr(torch, activation_name, None) or getattr(torch.nn.functional, activation_name, None)
|
||||
if not activation:
|
||||
raise ValueError(f'Activation "{activation_name}" was not found.')
|
||||
|
||||
class ActivationLayer(torch.nn.Module):
|
||||
def forward(self, input):
|
||||
return activation(input)
|
||||
|
||||
layers = []
|
||||
prev_layer_size = input_size
|
||||
for layer_size in hidden_layer_sizes:
|
||||
layer = torch.nn.Linear(prev_layer_size, layer_size)
|
||||
prev_layer_size = layer_size
|
||||
layers.append(layer)
|
||||
layers.append(ActivationLayer())
|
||||
|
||||
# Adding the output layer
|
||||
layers.append(torch.nn.Linear(prev_layer_size, output_size))
|
||||
|
||||
# Adding the optional activation after the output layer
|
||||
if output_activation_name:
|
||||
output_activation = getattr(torch, output_activation_name, None) or getattr(torch.nn.functional, output_activation_name, None)
|
||||
class OutputActivationLayer(torch.nn.Module):
|
||||
def forward(self, input):
|
||||
return output_activation(input)
|
||||
layers.append(OutputActivationLayer())
|
||||
|
||||
network = torch.nn.Sequential(*layers)
|
||||
script_module = torch.jit.script(network)
|
||||
print(script_module)
|
||||
script_module.save(model_path)
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Create fully connected pytorch network', description='Creates fully-connected network in PyTorch ScriptModule format')
|
||||
_parser.add_argument("--input-size", dest="input_size", type=int, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--hidden-layer-sizes", dest="hidden_layer_sizes", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--output-size", dest="output_size", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--activation-name", dest="activation_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--output-activation-name", dest="output_activation_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = create_fully_connected_pytorch_network(**_parsed_args)
|
||||
args:
|
||||
- --input-size
|
||||
- {inputValue: input_size}
|
||||
- if:
|
||||
cond: {isPresent: hidden_layer_sizes}
|
||||
then:
|
||||
- --hidden-layer-sizes
|
||||
- {inputValue: hidden_layer_sizes}
|
||||
- if:
|
||||
cond: {isPresent: output_size}
|
||||
then:
|
||||
- --output-size
|
||||
- {inputValue: output_size}
|
||||
- if:
|
||||
cond: {isPresent: activation_name}
|
||||
then:
|
||||
- --activation-name
|
||||
- {inputValue: activation_name}
|
||||
- if:
|
||||
cond: {isPresent: output_activation_name}
|
||||
then:
|
||||
- --output-activation-name
|
||||
- {inputValue: output_activation_name}
|
||||
- if:
|
||||
cond: {isPresent: random_seed}
|
||||
then:
|
||||
- --random-seed
|
||||
- {inputValue: random_seed}
|
||||
- --model
|
||||
- {outputPath: model}
|
||||
-209
@@ -1,209 +0,0 @@
|
||||
name: Train pytorch model from csv
|
||||
description: Trains PyTorch model
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml'
|
||||
inputs:
|
||||
- {name: model, type: PyTorchScriptModule}
|
||||
- {name: training_data, type: CSV}
|
||||
- {name: label_column_name, type: String}
|
||||
- {name: loss_function_name, type: String, default: mse_loss, optional: true}
|
||||
- {name: number_of_epochs, type: Integer, default: '1', optional: true}
|
||||
- {name: learning_rate, type: Float, default: '0.1', optional: true}
|
||||
- {name: optimizer_name, type: String, default: Adadelta, optional: true}
|
||||
- {name: optimizer_parameters, type: JsonObject, optional: true}
|
||||
- {name: batch_size, type: Integer, default: '32', optional: true}
|
||||
- {name: batch_log_interval, type: Integer, default: '100', optional: true}
|
||||
- {name: random_seed, type: Integer, default: '0', optional: true}
|
||||
outputs:
|
||||
- {name: trained_model, type: PyTorchScriptModule}
|
||||
implementation:
|
||||
container:
|
||||
image: pytorch/pytorch:1.7.1-cuda11.0-cudnn8-runtime
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
|
||||
--no-warn-script-location 'pandas==1.4.3' --user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def train_pytorch_model_from_csv(
|
||||
model_path,
|
||||
training_data_path,
|
||||
trained_model_path,
|
||||
label_column_name,
|
||||
loss_function_name = 'mse_loss',
|
||||
number_of_epochs = 1,
|
||||
learning_rate = 0.1,
|
||||
optimizer_name = 'Adadelta',
|
||||
optimizer_parameters = None,
|
||||
batch_size = 32,
|
||||
batch_log_interval = 100,
|
||||
random_seed = 0,
|
||||
):
|
||||
'''Trains PyTorch model'''
|
||||
import pandas
|
||||
import torch
|
||||
|
||||
torch.manual_seed(random_seed)
|
||||
|
||||
use_cuda = torch.cuda.is_available()
|
||||
device = torch.device("cuda" if use_cuda else "cpu")
|
||||
|
||||
model = torch.jit.load(model_path)
|
||||
model.to(device)
|
||||
model.train()
|
||||
|
||||
optimizer_class = getattr(torch.optim, optimizer_name, None)
|
||||
if not optimizer_class:
|
||||
raise ValueError(f'Optimizer "{optimizer_name}" was not found.')
|
||||
|
||||
optimizer_parameters = optimizer_parameters or {}
|
||||
optimizer_parameters['lr'] = learning_rate
|
||||
optimizer = optimizer_class(model.parameters(), **optimizer_parameters)
|
||||
|
||||
loss_function = getattr(torch, loss_function_name, None) or getattr(torch.nn, loss_function_name, None) or getattr(torch.nn.functional, loss_function_name, None)
|
||||
if not loss_function:
|
||||
raise ValueError(f'Loss function "{loss_function_name}" was not found.')
|
||||
|
||||
class CsvDataset(torch.utils.data.Dataset):
|
||||
|
||||
def __init__(self, file_path, label_column_name, drop_nan_columns_or_rows = 'columns'):
|
||||
dataframe = pandas.read_csv(file_path).convert_dtypes()
|
||||
# Preventing error: default_collate: batch must contain tensors, numpy arrays, numbers, dicts or lists; found object
|
||||
if drop_nan_columns_or_rows == 'columns':
|
||||
non_nan_data = dataframe.dropna(axis='columns')
|
||||
removed_columns = set(dataframe.columns) - set(non_nan_data.columns)
|
||||
if removed_columns:
|
||||
print('Skipping columns with NaNs: ' + str(removed_columns))
|
||||
dataframe = non_nan_data
|
||||
if drop_nan_columns_or_rows == 'rows':
|
||||
non_nan_data = dataframe.dropna(axis='index')
|
||||
number_of_removed_rows = len(dataframe) - len(non_nan_data)
|
||||
if number_of_removed_rows:
|
||||
print(f'Skipped {number_of_removed_rows} rows with NaNs.')
|
||||
dataframe = non_nan_data
|
||||
numerical_data = dataframe.select_dtypes(include='number')
|
||||
non_numerical_data = dataframe.select_dtypes(exclude='number')
|
||||
if not non_numerical_data.empty:
|
||||
print('Skipping non-number columns:')
|
||||
print(non_numerical_data.dtypes)
|
||||
self._dataframe = dataframe
|
||||
self.labels = numerical_data[[label_column_name]]
|
||||
self.features = numerical_data.drop(columns=[label_column_name])
|
||||
|
||||
def __len__(self):
|
||||
return len(self._dataframe)
|
||||
|
||||
def __getitem__(self, index):
|
||||
return [self.features.loc[index].to_numpy(dtype='float32'), self.labels.loc[index].to_numpy(dtype='float32')]
|
||||
|
||||
dataset = CsvDataset(
|
||||
file_path=training_data_path,
|
||||
label_column_name=label_column_name,
|
||||
)
|
||||
train_loader = torch.utils.data.DataLoader(
|
||||
dataset=dataset,
|
||||
batch_size=batch_size,
|
||||
shuffle=True,
|
||||
)
|
||||
|
||||
last_full_batch_loss = None
|
||||
for epoch in range(1, number_of_epochs + 1):
|
||||
for batch_idx, (data, target) in enumerate(train_loader):
|
||||
data, target = data.to(device), target.to(device)
|
||||
optimizer.zero_grad()
|
||||
output = model(data)
|
||||
loss = loss_function(output, target)
|
||||
loss.backward()
|
||||
optimizer.step()
|
||||
if len(data) == batch_size:
|
||||
last_full_batch_loss = loss.item()
|
||||
if batch_idx % batch_log_interval == 0:
|
||||
print('Train Epoch: {} [{}/{} ({:.0f}%)]\tLoss: {:.6f}'.format(
|
||||
epoch, batch_idx * len(data), len(train_loader.dataset),
|
||||
100. * batch_idx / len(train_loader), loss.item()))
|
||||
print(f'Training epoch {epoch} completed. Last full batch loss: {last_full_batch_loss:.6f}')
|
||||
|
||||
# print(optimizer.state_dict())
|
||||
model.save(trained_model_path)
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Train pytorch model from csv', description='Trains PyTorch model')
|
||||
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--training-data", dest="training_data_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--loss-function-name", dest="loss_function_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--number-of-epochs", dest="number_of_epochs", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--learning-rate", dest="learning_rate", type=float, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--optimizer-name", dest="optimizer_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--optimizer-parameters", dest="optimizer_parameters", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--batch-size", dest="batch_size", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--batch-log-interval", dest="batch_log_interval", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--trained-model", dest="trained_model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = train_pytorch_model_from_csv(**_parsed_args)
|
||||
args:
|
||||
- --model
|
||||
- {inputPath: model}
|
||||
- --training-data
|
||||
- {inputPath: training_data}
|
||||
- --label-column-name
|
||||
- {inputValue: label_column_name}
|
||||
- if:
|
||||
cond: {isPresent: loss_function_name}
|
||||
then:
|
||||
- --loss-function-name
|
||||
- {inputValue: loss_function_name}
|
||||
- if:
|
||||
cond: {isPresent: number_of_epochs}
|
||||
then:
|
||||
- --number-of-epochs
|
||||
- {inputValue: number_of_epochs}
|
||||
- if:
|
||||
cond: {isPresent: learning_rate}
|
||||
then:
|
||||
- --learning-rate
|
||||
- {inputValue: learning_rate}
|
||||
- if:
|
||||
cond: {isPresent: optimizer_name}
|
||||
then:
|
||||
- --optimizer-name
|
||||
- {inputValue: optimizer_name}
|
||||
- if:
|
||||
cond: {isPresent: optimizer_parameters}
|
||||
then:
|
||||
- --optimizer-parameters
|
||||
- {inputValue: optimizer_parameters}
|
||||
- if:
|
||||
cond: {isPresent: batch_size}
|
||||
then:
|
||||
- --batch-size
|
||||
- {inputValue: batch_size}
|
||||
- if:
|
||||
cond: {isPresent: batch_log_interval}
|
||||
then:
|
||||
- --batch-log-interval
|
||||
- {inputValue: batch_log_interval}
|
||||
- if:
|
||||
cond: {isPresent: random_seed}
|
||||
then:
|
||||
- --random-seed
|
||||
- {inputValue: random_seed}
|
||||
- --trained-model
|
||||
- {outputPath: trained_model}
|
||||
@@ -1,110 +0,0 @@
|
||||
name: Xgboost predict on CSV
|
||||
description: Makes predictions using a trained XGBoost model.
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/XGBoost/Predict/component.yaml'}
|
||||
inputs:
|
||||
- {name: data, type: CSV, description: Feature data in Apache Parquet format.}
|
||||
- {name: model, type: XGBoostModel, description: Trained model in binary XGBoost format.}
|
||||
- {name: label_column_name, type: String, description: Optional. Name of the column
|
||||
containing the label data that is excluded during the prediction., optional: true}
|
||||
outputs:
|
||||
- {name: predictions, description: Model predictions.}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.10
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'xgboost==1.6.1' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
|
||||
-m pip install --quiet --no-warn-script-location 'xgboost==1.6.1' 'pandas==1.4.3'
|
||||
--user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def xgboost_predict_on_CSV(
|
||||
data_path,
|
||||
model_path,
|
||||
predictions_path,
|
||||
label_column_name = None,
|
||||
):
|
||||
"""Makes predictions using a trained XGBoost model.
|
||||
|
||||
Args:
|
||||
data_path: Feature data in Apache Parquet format.
|
||||
model_path: Trained model in binary XGBoost format.
|
||||
predictions_path: Model predictions.
|
||||
label_column_name: Optional. Name of the column containing the label data that is excluded during the prediction.
|
||||
|
||||
Annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
"""
|
||||
from pathlib import Path
|
||||
|
||||
import numpy
|
||||
import pandas
|
||||
import xgboost
|
||||
|
||||
df = pandas.read_csv(
|
||||
data_path,
|
||||
).convert_dtypes()
|
||||
print("Evaluation data information:")
|
||||
df.info(verbose=True)
|
||||
# Converting column types that XGBoost does not support
|
||||
for column_name, dtype in df.dtypes.items():
|
||||
if dtype in ["string", "object"]:
|
||||
print(f"Treating the {dtype.name} column '{column_name}' as categorical.")
|
||||
df[column_name] = df[column_name].astype("category")
|
||||
print(f"Inferred {len(df[column_name].cat.categories)} categories for the '{column_name}' column.")
|
||||
# Working around the XGBoost issue with nullable floats: https://github.com/dmlc/xgboost/issues/8213
|
||||
if pandas.api.types.is_float_dtype(dtype):
|
||||
# Converting from "Float64" to "float64"
|
||||
df[column_name] = df[column_name].astype(dtype.name.lower())
|
||||
print("Final evaluation data information:")
|
||||
df.info(verbose=True)
|
||||
|
||||
if label_column_name is not None:
|
||||
df = df.drop(columns=[label_column_name])
|
||||
|
||||
testing_data = xgboost.DMatrix(
|
||||
data=df,
|
||||
enable_categorical=True,
|
||||
)
|
||||
|
||||
model = xgboost.Booster(model_file=model_path)
|
||||
|
||||
predictions = model.predict(testing_data)
|
||||
|
||||
Path(predictions_path).parent.mkdir(parents=True, exist_ok=True)
|
||||
numpy.savetxt(predictions_path, predictions)
|
||||
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Xgboost predict on CSV', description='Makes predictions using a trained XGBoost model.')
|
||||
_parser.add_argument("--data", dest="data_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--predictions", dest="predictions_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = xgboost_predict_on_CSV(**_parsed_args)
|
||||
args:
|
||||
- --data
|
||||
- {inputPath: data}
|
||||
- --model
|
||||
- {inputPath: model}
|
||||
- if:
|
||||
cond: {isPresent: label_column_name}
|
||||
then:
|
||||
- --label-column-name
|
||||
- {inputValue: label_column_name}
|
||||
- --predictions
|
||||
- {outputPath: predictions}
|
||||
@@ -1,241 +0,0 @@
|
||||
name: Train XGBoost model on CSV
|
||||
description: Trains an XGBoost model.
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/XGBoost/Train/component.yaml'}
|
||||
inputs:
|
||||
- {name: training_data, type: CSV, description: Training data in CSV format.}
|
||||
- {name: label_column_name, type: String, description: Name of the column containing
|
||||
the label data.}
|
||||
- {name: starting_model, type: XGBoostModel, description: Existing trained model to
|
||||
start from (in the binary XGBoost format)., optional: true}
|
||||
- {name: num_iterations, type: Integer, description: Number of boosting iterations.,
|
||||
default: '10', optional: true}
|
||||
- name: objective
|
||||
type: String
|
||||
description: |-
|
||||
The learning task and the corresponding learning objective.
|
||||
See https://xgboost.readthedocs.io/en/latest/parameter.html#learning-task-parameters
|
||||
The most common values are:
|
||||
"reg:squarederror" - Regression with squared loss (default).
|
||||
"reg:logistic" - Logistic regression.
|
||||
"binary:logistic" - Logistic regression for binary classification, output probability.
|
||||
"binary:logitraw" - Logistic regression for binary classification, output score before logistic transformation
|
||||
"rank:pairwise" - Use LambdaMART to perform pairwise ranking where the pairwise loss is minimized
|
||||
"rank:ndcg" - Use LambdaMART to perform list-wise ranking where Normalized Discounted Cumulative Gain (NDCG) is maximized
|
||||
default: reg:squarederror
|
||||
optional: true
|
||||
- {name: booster, type: String, description: 'The booster to use. Can be `gbtree`,
|
||||
`gblinear` or `dart`; `gbtree` and `dart` use tree based models while `gblinear`
|
||||
uses linear functions.', default: gbtree, optional: true}
|
||||
- {name: learning_rate, type: Float, description: 'Step size shrinkage used in update
|
||||
to prevents overfitting. Range: [0,1].', default: '0.3', optional: true}
|
||||
- name: min_split_loss
|
||||
type: Float
|
||||
description: |-
|
||||
Minimum loss reduction required to make a further partition on a leaf node of the tree.
|
||||
The larger `min_split_loss` is, the more conservative the algorithm will be. Range: [0,Inf].
|
||||
default: '0'
|
||||
optional: true
|
||||
- name: max_depth
|
||||
type: Integer
|
||||
description: |-
|
||||
Maximum depth of a tree. Increasing this value will make the model more complex and more likely to overfit.
|
||||
0 indicates no limit on depth. Range: [0,Inf].
|
||||
default: '6'
|
||||
optional: true
|
||||
- {name: booster_params, type: JsonObject, description: 'Parameters for the booster.
|
||||
See https://xgboost.readthedocs.io/en/latest/parameter.html', optional: true}
|
||||
outputs:
|
||||
- {name: model, type: XGBoostModel, description: Trained model in the binary XGBoost
|
||||
format.}
|
||||
- {name: model_config, type: XGBoostModelConfig, description: The internal parameter
|
||||
configuration of Booster as a JSON string.}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.10
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'xgboost==1.6.1' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
|
||||
-m pip install --quiet --no-warn-script-location 'xgboost==1.6.1' 'pandas==1.4.3'
|
||||
--user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def train_XGBoost_model_on_CSV(
|
||||
training_data_path,
|
||||
model_path,
|
||||
model_config_path,
|
||||
label_column_name,
|
||||
starting_model_path = None,
|
||||
num_iterations = 10,
|
||||
# Booster parameters
|
||||
objective = "reg:squarederror",
|
||||
booster = "gbtree",
|
||||
learning_rate = 0.3,
|
||||
min_split_loss = 0,
|
||||
max_depth = 6,
|
||||
booster_params = None,
|
||||
):
|
||||
"""Trains an XGBoost model.
|
||||
|
||||
Args:
|
||||
training_data_path: Training data in CSV format.
|
||||
model_path: Trained model in the binary XGBoost format.
|
||||
model_config_path: The internal parameter configuration of Booster as a JSON string.
|
||||
starting_model_path: Existing trained model to start from (in the binary XGBoost format).
|
||||
label_column_name: Name of the column containing the label data.
|
||||
num_iterations: Number of boosting iterations.
|
||||
booster_params: Parameters for the booster. See https://xgboost.readthedocs.io/en/latest/parameter.html
|
||||
objective: The learning task and the corresponding learning objective.
|
||||
See https://xgboost.readthedocs.io/en/latest/parameter.html#learning-task-parameters
|
||||
The most common values are:
|
||||
"reg:squarederror" - Regression with squared loss (default).
|
||||
"reg:logistic" - Logistic regression.
|
||||
"binary:logistic" - Logistic regression for binary classification, output probability.
|
||||
"binary:logitraw" - Logistic regression for binary classification, output score before logistic transformation
|
||||
"rank:pairwise" - Use LambdaMART to perform pairwise ranking where the pairwise loss is minimized
|
||||
"rank:ndcg" - Use LambdaMART to perform list-wise ranking where Normalized Discounted Cumulative Gain (NDCG) is maximized
|
||||
booster: The booster to use. Can be `gbtree`, `gblinear` or `dart`; `gbtree` and `dart` use tree based models while `gblinear` uses linear functions.
|
||||
learning_rate: Step size shrinkage used in update to prevents overfitting. Range: [0,1].
|
||||
min_split_loss: Minimum loss reduction required to make a further partition on a leaf node of the tree.
|
||||
The larger `min_split_loss` is, the more conservative the algorithm will be. Range: [0,Inf].
|
||||
max_depth: Maximum depth of a tree. Increasing this value will make the model more complex and more likely to overfit.
|
||||
0 indicates no limit on depth. Range: [0,Inf].
|
||||
|
||||
Annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
"""
|
||||
import pandas
|
||||
import xgboost
|
||||
|
||||
df = pandas.read_csv(
|
||||
training_data_path,
|
||||
).convert_dtypes()
|
||||
print("Training data information:")
|
||||
df.info(verbose=True)
|
||||
# Converting column types that XGBoost does not support
|
||||
for column_name, dtype in df.dtypes.items():
|
||||
if dtype in ["string", "object"]:
|
||||
print(f"Treating the {dtype.name} column '{column_name}' as categorical.")
|
||||
df[column_name] = df[column_name].astype("category")
|
||||
print(f"Inferred {len(df[column_name].cat.categories)} categories for the '{column_name}' column.")
|
||||
# Working around the XGBoost issue with nullable floats: https://github.com/dmlc/xgboost/issues/8213
|
||||
if pandas.api.types.is_float_dtype(dtype):
|
||||
# Converting from "Float64" to "float64"
|
||||
df[column_name] = df[column_name].astype(dtype.name.lower())
|
||||
print()
|
||||
print("Final training data information:")
|
||||
df.info(verbose=True)
|
||||
|
||||
training_data = xgboost.DMatrix(
|
||||
data=df.drop(columns=[label_column_name]),
|
||||
label=df[[label_column_name]],
|
||||
enable_categorical=True,
|
||||
)
|
||||
|
||||
booster_params = booster_params or {}
|
||||
booster_params.setdefault("objective", objective)
|
||||
booster_params.setdefault("booster", booster)
|
||||
booster_params.setdefault("learning_rate", learning_rate)
|
||||
booster_params.setdefault("min_split_loss", min_split_loss)
|
||||
booster_params.setdefault("max_depth", max_depth)
|
||||
|
||||
starting_model = None
|
||||
if starting_model_path:
|
||||
starting_model = xgboost.Booster(model_file=starting_model_path)
|
||||
|
||||
print()
|
||||
print("Training the model:")
|
||||
model = xgboost.train(
|
||||
params=booster_params,
|
||||
dtrain=training_data,
|
||||
num_boost_round=num_iterations,
|
||||
xgb_model=starting_model,
|
||||
evals=[(training_data, "training_data")],
|
||||
)
|
||||
|
||||
# Saving the model in binary format
|
||||
model.save_model(model_path)
|
||||
|
||||
model_config_str = model.save_config()
|
||||
with open(model_config_path, "w") as model_config_file:
|
||||
model_config_file.write(model_config_str)
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Train XGBoost model on CSV', description='Trains an XGBoost model.')
|
||||
_parser.add_argument("--training-data", dest="training_data_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--starting-model", dest="starting_model_path", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--num-iterations", dest="num_iterations", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--objective", dest="objective", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--booster", dest="booster", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--learning-rate", dest="learning_rate", type=float, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--min-split-loss", dest="min_split_loss", type=float, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--max-depth", dest="max_depth", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--booster-params", dest="booster_params", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--model-config", dest="model_config_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = train_XGBoost_model_on_CSV(**_parsed_args)
|
||||
args:
|
||||
- --training-data
|
||||
- {inputPath: training_data}
|
||||
- --label-column-name
|
||||
- {inputValue: label_column_name}
|
||||
- if:
|
||||
cond: {isPresent: starting_model}
|
||||
then:
|
||||
- --starting-model
|
||||
- {inputPath: starting_model}
|
||||
- if:
|
||||
cond: {isPresent: num_iterations}
|
||||
then:
|
||||
- --num-iterations
|
||||
- {inputValue: num_iterations}
|
||||
- if:
|
||||
cond: {isPresent: objective}
|
||||
then:
|
||||
- --objective
|
||||
- {inputValue: objective}
|
||||
- if:
|
||||
cond: {isPresent: booster}
|
||||
then:
|
||||
- --booster
|
||||
- {inputValue: booster}
|
||||
- if:
|
||||
cond: {isPresent: learning_rate}
|
||||
then:
|
||||
- --learning-rate
|
||||
- {inputValue: learning_rate}
|
||||
- if:
|
||||
cond: {isPresent: min_split_loss}
|
||||
then:
|
||||
- --min-split-loss
|
||||
- {inputValue: min_split_loss}
|
||||
- if:
|
||||
cond: {isPresent: max_depth}
|
||||
then:
|
||||
- --max-depth
|
||||
- {inputValue: max_depth}
|
||||
- if:
|
||||
cond: {isPresent: booster_params}
|
||||
then:
|
||||
- --booster-params
|
||||
- {inputValue: booster_params}
|
||||
- --model
|
||||
- {outputPath: model}
|
||||
- --model-config
|
||||
- {outputPath: model_config}
|
||||
-204
@@ -1,204 +0,0 @@
|
||||
name: Split rows into subsets
|
||||
description: Splits the data table according to the split fractions.
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml'}
|
||||
inputs:
|
||||
- {name: table, type: CSV}
|
||||
- {name: fraction_1, type: Float, description: 'The proportion of the lines to put
|
||||
into the 1st split. Range: [0, 1]'}
|
||||
- name: fraction_2
|
||||
type: Float
|
||||
description: |-
|
||||
The proportion of the lines to put into the 2nd split. Range: [0, 1]
|
||||
If fraction_2 is not specified, then fraction_2 = 1 - fraction_1.
|
||||
The remaining lines go to the 3rd split (if any).
|
||||
optional: true
|
||||
- {name: random_seed, type: Integer, default: '0', optional: true}
|
||||
outputs:
|
||||
- {name: split_1, type: CSV}
|
||||
- {name: split_2, type: CSV}
|
||||
- {name: split_3, type: CSV}
|
||||
- {name: split_1_count, type: Integer}
|
||||
- {name: split_2_count, type: Integer}
|
||||
- {name: split_3_count, type: Integer}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def split_rows_into_subsets(
|
||||
table_path,
|
||||
split_1_path,
|
||||
split_2_path,
|
||||
split_3_path,
|
||||
fraction_1,
|
||||
fraction_2 = None,
|
||||
random_seed = 0,
|
||||
):
|
||||
"""Splits the data table according to the split fractions.
|
||||
|
||||
Args:
|
||||
fraction_1: The proportion of the lines to put into the 1st split. Range: [0, 1]
|
||||
fraction_2: The proportion of the lines to put into the 2nd split. Range: [0, 1]
|
||||
If fraction_2 is not specified, then fraction_2 = 1 - fraction_1.
|
||||
The remaining lines go to the 3rd split (if any).
|
||||
"""
|
||||
import random
|
||||
|
||||
random.seed(random_seed)
|
||||
|
||||
SHUFFLE_BUFFER_SIZE = 10000
|
||||
|
||||
num_splits = 3
|
||||
|
||||
if fraction_1 < 0 or fraction_1 > 1:
|
||||
raise ValueError("fraction_1 must be in between 0 and 1.")
|
||||
|
||||
if fraction_2 is None:
|
||||
fraction_2 = 1 - fraction_1
|
||||
if fraction_2 < 0 or fraction_2 > 1:
|
||||
raise ValueError("fraction_2 must be in between 0 and 1.")
|
||||
|
||||
fraction_3 = 1 - fraction_1 - fraction_2
|
||||
|
||||
fractions = [
|
||||
fraction_1,
|
||||
fraction_2,
|
||||
fraction_3,
|
||||
]
|
||||
|
||||
assert sum(fractions) == 1
|
||||
|
||||
written_line_counts = [0] * num_splits
|
||||
|
||||
output_files = [
|
||||
open(split_1_path, "wb"),
|
||||
open(split_2_path, "wb"),
|
||||
open(split_3_path, "wb"),
|
||||
]
|
||||
|
||||
with open(table_path, "rb") as input_file:
|
||||
# Writing the headers
|
||||
header_line = input_file.readline()
|
||||
for output_file in output_files:
|
||||
output_file.write(header_line)
|
||||
|
||||
while True:
|
||||
line_buffer = []
|
||||
for i in range(SHUFFLE_BUFFER_SIZE):
|
||||
line = input_file.readline()
|
||||
if not line:
|
||||
break
|
||||
line_buffer.append(line)
|
||||
|
||||
# We need to exactly partition the lines between the output files
|
||||
# To overcome possible systematic bias, we could calculate the total numbers
|
||||
# of lines written to each file and take that into account.
|
||||
num_read_lines = len(line_buffer)
|
||||
number_of_lines_for_files = [0] * num_splits
|
||||
# List that will have the index of the destination file for each line
|
||||
file_index_for_line = []
|
||||
remaining_lines = num_read_lines
|
||||
remaining_fraction = 1
|
||||
for i in range(num_splits):
|
||||
number_of_lines_for_file = (
|
||||
round(remaining_lines * (fractions[i] / remaining_fraction))
|
||||
if remaining_fraction > 0
|
||||
else 0
|
||||
)
|
||||
number_of_lines_for_files[i] = number_of_lines_for_file
|
||||
remaining_lines -= number_of_lines_for_file
|
||||
remaining_fraction -= fractions[i]
|
||||
file_index_for_line.extend([i] * number_of_lines_for_file)
|
||||
|
||||
assert remaining_lines == 0, f"{remaining_lines}"
|
||||
assert len(file_index_for_line) == num_read_lines
|
||||
|
||||
random.shuffle(file_index_for_line)
|
||||
|
||||
for i in range(num_read_lines):
|
||||
output_files[file_index_for_line[i]].write(line_buffer[i])
|
||||
written_line_counts[file_index_for_line[i]] += 1
|
||||
|
||||
# Exit if the file ended before we were able to fully fill the buffer
|
||||
if len(line_buffer) != SHUFFLE_BUFFER_SIZE:
|
||||
break
|
||||
|
||||
for output_file in output_files:
|
||||
output_file.close()
|
||||
|
||||
return written_line_counts
|
||||
|
||||
def _serialize_int(int_value: int) -> str:
|
||||
if isinstance(int_value, str):
|
||||
return int_value
|
||||
if not isinstance(int_value, int):
|
||||
raise TypeError('Value "{}" has type "{}" instead of int.'.format(str(int_value), str(type(int_value))))
|
||||
return str(int_value)
|
||||
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Split rows into subsets', description='Splits the data table according to the split fractions.')
|
||||
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--fraction-1", dest="fraction_1", type=float, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--fraction-2", dest="fraction_2", type=float, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--split-1", dest="split_1_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--split-2", dest="split_2_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--split-3", dest="split_3_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=3)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
_output_files = _parsed_args.pop("_output_paths", [])
|
||||
|
||||
_outputs = split_rows_into_subsets(**_parsed_args)
|
||||
|
||||
_output_serializers = [
|
||||
_serialize_int,
|
||||
_serialize_int,
|
||||
_serialize_int,
|
||||
|
||||
]
|
||||
|
||||
import os
|
||||
for idx, output_file in enumerate(_output_files):
|
||||
try:
|
||||
os.makedirs(os.path.dirname(output_file))
|
||||
except OSError:
|
||||
pass
|
||||
with open(output_file, 'w') as f:
|
||||
f.write(_output_serializers[idx](_outputs[idx]))
|
||||
args:
|
||||
- --table
|
||||
- {inputPath: table}
|
||||
- --fraction-1
|
||||
- {inputValue: fraction_1}
|
||||
- if:
|
||||
cond: {isPresent: fraction_2}
|
||||
then:
|
||||
- --fraction-2
|
||||
- {inputValue: fraction_2}
|
||||
- if:
|
||||
cond: {isPresent: random_seed}
|
||||
then:
|
||||
- --random-seed
|
||||
- {inputValue: random_seed}
|
||||
- --split-1
|
||||
- {outputPath: split_1}
|
||||
- --split-2
|
||||
- {outputPath: split_2}
|
||||
- --split-3
|
||||
- {outputPath: split_3}
|
||||
- '----output-paths'
|
||||
- {outputPath: split_1_count}
|
||||
- {outputPath: split_2_count}
|
||||
- {outputPath: split_3_count}
|
||||
-241
@@ -1,241 +0,0 @@
|
||||
name: Deploy model to endpoint for Google Cloud Vertex AI Model
|
||||
description: Deploys Google Cloud Vertex AI Model to a Google Cloud Vertex AI Endpoint.
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/workaround_for_buggy_KFPv2_compiler/component.yaml'}
|
||||
inputs:
|
||||
- {name: model_name, type: String, description: Full resource name of a Google Cloud
|
||||
Vertex AI Model}
|
||||
- name: endpoint_name
|
||||
type: String
|
||||
description: |-
|
||||
Optional. Full name of Google Cloud Vertex Endpoint. A new
|
||||
endpoint is created if the name is not passed.
|
||||
optional: true
|
||||
- name: machine_type
|
||||
type: String
|
||||
description: |-
|
||||
The type of the machine. See the [list of machine types
|
||||
supported for prediction
|
||||
](https://cloud.google.com/vertex-ai/docs/predictions/configure-compute#machine-types).
|
||||
Defaults to "n1-standard-2"
|
||||
default: n1-standard-2
|
||||
optional: true
|
||||
- name: min_replica_count
|
||||
type: Integer
|
||||
description: |-
|
||||
Optional. The minimum number of machine replicas this deployed
|
||||
model will be always deployed on. If traffic against it increases,
|
||||
it may dynamically be deployed onto more replicas, and as traffic
|
||||
decreases, some of these extra replicas may be freed.
|
||||
default: '1'
|
||||
optional: true
|
||||
- name: max_replica_count
|
||||
type: Integer
|
||||
description: |-
|
||||
Optional. The maximum number of replicas this deployed model may
|
||||
be deployed on when the traffic against it increases. If requested
|
||||
value is too large, the deployment will error, but if deployment
|
||||
succeeds then the ability to scale the model to that many replicas
|
||||
is guaranteed (barring service outages). If traffic against the
|
||||
deployed model increases beyond what its replicas at maximum may
|
||||
handle, a portion of the traffic will be dropped. If this value
|
||||
is not provided, the smaller value of min_replica_count or 1 will
|
||||
be used.
|
||||
default: '1'
|
||||
optional: true
|
||||
- name: accelerator_type
|
||||
type: String
|
||||
description: |-
|
||||
Optional. Hardware accelerator type. Must also set accelerator_count if used.
|
||||
One of ACCELERATOR_TYPE_UNSPECIFIED, NVIDIA_TESLA_K80, NVIDIA_TESLA_P100,
|
||||
NVIDIA_TESLA_V100, NVIDIA_TESLA_P4, NVIDIA_TESLA_T4
|
||||
optional: true
|
||||
- {name: accelerator_count, type: Integer, description: Optional. The number of accelerators
|
||||
to attach to a worker replica., optional: true}
|
||||
outputs:
|
||||
- {name: endpoint_name, type: String}
|
||||
- {name: endpoint_dict, type: JsonObject}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'google-cloud-aiplatform==1.7.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
|
||||
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.7.0'
|
||||
--user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def deploy_model_to_endpoint_for_Google_Cloud_Vertex_AI_Model(
|
||||
model_name,
|
||||
endpoint_name = None,
|
||||
machine_type = "n1-standard-2",
|
||||
min_replica_count = 1,
|
||||
max_replica_count = 1,
|
||||
accelerator_type = None,
|
||||
accelerator_count = None,
|
||||
#
|
||||
# Uncomment when anyone requests these:
|
||||
# deployed_model_display_name: str = None,
|
||||
# traffic_percentage: int = 0,
|
||||
# traffic_split: dict = None,
|
||||
# service_account: str = None,
|
||||
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
|
||||
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
|
||||
#
|
||||
# encryption_spec_key_name: str = None,
|
||||
):
|
||||
"""Deploys Google Cloud Vertex AI Model to a Google Cloud Vertex AI Endpoint.
|
||||
|
||||
Args:
|
||||
model_name: Full resource name of a Google Cloud Vertex AI Model
|
||||
endpoint_name: Optional. Full name of Google Cloud Vertex Endpoint. A new
|
||||
endpoint is created if the name is not passed.
|
||||
machine_type: The type of the machine. See the [list of machine types
|
||||
supported for prediction
|
||||
](https://cloud.google.com/vertex-ai/docs/predictions/configure-compute#machine-types).
|
||||
Defaults to "n1-standard-2"
|
||||
min_replica_count (int):
|
||||
Optional. The minimum number of machine replicas this deployed
|
||||
model will be always deployed on. If traffic against it increases,
|
||||
it may dynamically be deployed onto more replicas, and as traffic
|
||||
decreases, some of these extra replicas may be freed.
|
||||
max_replica_count (int):
|
||||
Optional. The maximum number of replicas this deployed model may
|
||||
be deployed on when the traffic against it increases. If requested
|
||||
value is too large, the deployment will error, but if deployment
|
||||
succeeds then the ability to scale the model to that many replicas
|
||||
is guaranteed (barring service outages). If traffic against the
|
||||
deployed model increases beyond what its replicas at maximum may
|
||||
handle, a portion of the traffic will be dropped. If this value
|
||||
is not provided, the smaller value of min_replica_count or 1 will
|
||||
be used.
|
||||
accelerator_type (str):
|
||||
Optional. Hardware accelerator type. Must also set accelerator_count if used.
|
||||
One of ACCELERATOR_TYPE_UNSPECIFIED, NVIDIA_TESLA_K80, NVIDIA_TESLA_P100,
|
||||
NVIDIA_TESLA_V100, NVIDIA_TESLA_P4, NVIDIA_TESLA_T4
|
||||
accelerator_count (int):
|
||||
Optional. The number of accelerators to attach to a worker replica.
|
||||
"""
|
||||
import json
|
||||
from google.cloud import aiplatform
|
||||
|
||||
model = aiplatform.Model(model_name=model_name)
|
||||
|
||||
if endpoint_name:
|
||||
endpoint = aiplatform.Endpoint(endpoint_name=endpoint_name)
|
||||
else:
|
||||
endpoint_display_name = model.display_name[:118] + "_endpoint"
|
||||
endpoint = aiplatform.Endpoint.create(
|
||||
display_name=endpoint_display_name,
|
||||
project=model.project,
|
||||
location=model.location,
|
||||
# encryption_spec_key_name=encryption_spec_key_name,
|
||||
labels={"component-source": "github-com-ark-kun-pipeline-components"},
|
||||
)
|
||||
|
||||
endpoint = model.deploy(
|
||||
endpoint=endpoint,
|
||||
# deployed_model_display_name=deployed_model_display_name,
|
||||
machine_type=machine_type,
|
||||
min_replica_count=min_replica_count,
|
||||
max_replica_count=max_replica_count,
|
||||
accelerator_type=accelerator_type,
|
||||
accelerator_count=accelerator_count,
|
||||
# service_account=service_account,
|
||||
# explanation_metadata=explanation_metadata,
|
||||
# explanation_parameters=explanation_parameters,
|
||||
# encryption_spec_key_name=encryption_spec_key_name,
|
||||
)
|
||||
|
||||
endpoint_json = json.dumps(endpoint.to_dict(), indent=2)
|
||||
print(endpoint_json)
|
||||
return (endpoint.resource_name, endpoint_json)
|
||||
|
||||
def _serialize_json(obj) -> str:
|
||||
if isinstance(obj, str):
|
||||
return obj
|
||||
import json
|
||||
def default_serializer(obj):
|
||||
if hasattr(obj, 'to_struct'):
|
||||
return obj.to_struct()
|
||||
else:
|
||||
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
|
||||
return json.dumps(obj, default=default_serializer, sort_keys=True)
|
||||
|
||||
def _serialize_str(str_value: str) -> str:
|
||||
if not isinstance(str_value, str):
|
||||
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
|
||||
return str_value
|
||||
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Deploy model to endpoint for Google Cloud Vertex AI Model', description='Deploys Google Cloud Vertex AI Model to a Google Cloud Vertex AI Endpoint.')
|
||||
_parser.add_argument("--model-name", dest="model_name", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--endpoint-name", dest="endpoint_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--machine-type", dest="machine_type", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--min-replica-count", dest="min_replica_count", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--max-replica-count", dest="max_replica_count", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--accelerator-type", dest="accelerator_type", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--accelerator-count", dest="accelerator_count", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
_output_files = _parsed_args.pop("_output_paths", [])
|
||||
|
||||
_outputs = deploy_model_to_endpoint_for_Google_Cloud_Vertex_AI_Model(**_parsed_args)
|
||||
|
||||
_output_serializers = [
|
||||
_serialize_str,
|
||||
_serialize_json,
|
||||
|
||||
]
|
||||
|
||||
import os
|
||||
for idx, output_file in enumerate(_output_files):
|
||||
try:
|
||||
os.makedirs(os.path.dirname(output_file))
|
||||
except OSError:
|
||||
pass
|
||||
with open(output_file, 'w') as f:
|
||||
f.write(_output_serializers[idx](_outputs[idx]))
|
||||
args:
|
||||
- --model-name
|
||||
- {inputValue: model_name}
|
||||
- if:
|
||||
cond: {isPresent: endpoint_name}
|
||||
then:
|
||||
- --endpoint-name
|
||||
- {inputValue: endpoint_name}
|
||||
- if:
|
||||
cond: {isPresent: machine_type}
|
||||
then:
|
||||
- --machine-type
|
||||
- {inputValue: machine_type}
|
||||
- if:
|
||||
cond: {isPresent: min_replica_count}
|
||||
then:
|
||||
- --min-replica-count
|
||||
- {inputValue: min_replica_count}
|
||||
- if:
|
||||
cond: {isPresent: max_replica_count}
|
||||
then:
|
||||
- --max-replica-count
|
||||
- {inputValue: max_replica_count}
|
||||
- if:
|
||||
cond: {isPresent: accelerator_type}
|
||||
then:
|
||||
- --accelerator-type
|
||||
- {inputValue: accelerator_type}
|
||||
- if:
|
||||
cond: {isPresent: accelerator_count}
|
||||
then:
|
||||
- --accelerator-count
|
||||
- {inputValue: accelerator_count}
|
||||
- '----output-paths'
|
||||
- {outputPath: endpoint_name}
|
||||
- {outputPath: endpoint_dict}
|
||||
-297
@@ -1,297 +0,0 @@
|
||||
name: Upload PyTorch model archive to Google Cloud Vertex AI
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml'}
|
||||
inputs:
|
||||
- {name: model_archive, type: PyTorchModelArchive}
|
||||
- {name: torchserve_version, type: String, default: 0.6.0, optional: true}
|
||||
- name: use_gpu
|
||||
type: Boolean
|
||||
default: "False"
|
||||
optional: true
|
||||
- {name: display_name, type: String, optional: true}
|
||||
- {name: description, type: String, optional: true}
|
||||
- {name: project, type: String, optional: true}
|
||||
- {name: location, type: String, optional: true}
|
||||
- {name: labels, type: JsonObject, optional: true}
|
||||
- {name: staging_bucket, type: String, optional: true}
|
||||
outputs:
|
||||
- {name: model_name, type: String}
|
||||
- {name: model_dict, type: JsonObject}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'google-cloud-aiplatform==1.13.1' 'google-cloud-build==3.8.3' || PIP_DISABLE_PIP_VERSION_CHECK=1
|
||||
python3 -m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.13.1'
|
||||
'google-cloud-build==3.8.3' --user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI(
|
||||
model_archive_path,
|
||||
torchserve_version = "0.6.0",
|
||||
use_gpu = False,
|
||||
|
||||
display_name = None,
|
||||
description = None,
|
||||
|
||||
# Uncomment when anyone requests these:
|
||||
# instance_schema_uri: str = None,
|
||||
# parameters_schema_uri: str = None,
|
||||
# prediction_schema_uri: str = None,
|
||||
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
|
||||
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
|
||||
|
||||
project = None,
|
||||
location = None,
|
||||
labels = None,
|
||||
# encryption_spec_key_name: str = None,
|
||||
staging_bucket = None,
|
||||
):
|
||||
import json
|
||||
import os
|
||||
from google.cloud import aiplatform
|
||||
|
||||
if not location:
|
||||
location = os.environ.get("CLOUD_ML_REGION")
|
||||
|
||||
if not labels:
|
||||
labels = {}
|
||||
labels["component-source"] = "github-com-ark-kun-pipeline-components"
|
||||
|
||||
container_image_tag = torchserve_version + "-" + ("gpu" if use_gpu else "cpu")
|
||||
container_image_uri = f"pytorch/torchserve:{container_image_tag}"
|
||||
|
||||
# Vertex Endpoints refuse to support non-Google container registries.
|
||||
# We have to work around this to reduce user frustration
|
||||
# TODO: Remove this code when Vertex Endpoints service starts supporting other container registries.
|
||||
def copy_container_image(
|
||||
src_container_image_uri,
|
||||
dst_container_image_uri,
|
||||
project_id,
|
||||
):
|
||||
from google.cloud.devtools import cloudbuild
|
||||
from google import protobuf
|
||||
build_client = cloudbuild.CloudBuildClient()
|
||||
build_config = cloudbuild.Build(
|
||||
images=[dst_container_image_uri],
|
||||
steps=[
|
||||
cloudbuild.BuildStep(
|
||||
name="gcr.io/cloud-builders/docker",
|
||||
entrypoint="bash",
|
||||
args=[
|
||||
"-exc",
|
||||
'docker pull --quiet "$0" && docker tag "$0" "$1"',
|
||||
src_container_image_uri,
|
||||
dst_container_image_uri,
|
||||
],
|
||||
),
|
||||
],
|
||||
timeout=protobuf.duration_pb2.Duration(
|
||||
seconds=1800,
|
||||
),
|
||||
)
|
||||
build_operation = build_client.create_build(
|
||||
project_id=project_id,
|
||||
build=build_config,
|
||||
)
|
||||
try:
|
||||
result = build_operation.result()
|
||||
except:
|
||||
print(f"Logs are available at [{build_operation.metadata.build.log_url}].")
|
||||
raise
|
||||
return result
|
||||
|
||||
project_id = aiplatform.initializer.global_config.project
|
||||
mirrored_container_uri = f"gcr.io/{project_id}/container_mirror/{container_image_uri}"
|
||||
# FIX: Only mirror when image does not exist
|
||||
# docker does is unable to get the registry data from inside container (it cannot connecto to docker socket):
|
||||
# docker.errors.DockerException: Error while fetching server API version: ('Connection aborted.', FileNotFoundError(2, 'No such file or directory'))
|
||||
# import docker
|
||||
# try:
|
||||
# docker_client = docker.from_env()
|
||||
# docker_client.images.get_registry_data(mirrored_container_uri)
|
||||
# except docker.errors.NotFound:
|
||||
if True:
|
||||
print(f"Mirroring {container_image_uri} to {mirrored_container_uri}")
|
||||
copy_container_image(
|
||||
src_container_image_uri=container_image_uri,
|
||||
dst_container_image_uri=mirrored_container_uri,
|
||||
project_id=project_id,
|
||||
)
|
||||
container_image_uri = mirrored_container_uri
|
||||
# End of container image mirroring code
|
||||
|
||||
model_archive_file_name = os.path.basename(model_archive_path)
|
||||
model_archive_dir = os.path.dirname(model_archive_path)
|
||||
|
||||
model = aiplatform.Model.upload(
|
||||
# FIX: Use public image or mirror the official image
|
||||
#serving_container_image_uri="gcr.io/avolkov-31337/mirror/pytorch/torchserve",
|
||||
serving_container_image_uri=container_image_uri,
|
||||
artifact_uri=model_archive_dir,
|
||||
serving_container_command=[
|
||||
"bash",
|
||||
"-exc",
|
||||
'''
|
||||
model_archive_uri="$0"
|
||||
#model_archive_local_path=$(mktemp --suffix ".mar")
|
||||
# For some reason the model must already be inside the model-store directory.
|
||||
model_archive_local_path=./model-store/model.mar
|
||||
|
||||
# Downloading the model archive from GCS
|
||||
# TODO: Fix gsutil bugs (requires project ID, has auth issues) and use gsutil instead.
|
||||
# gsutil cp "$model_archive_uri" "$model_archive_local_path"
|
||||
pip install google-cloud-storage
|
||||
python -c '
|
||||
import sys
|
||||
from google.cloud import storage
|
||||
|
||||
model_archive_uri = sys.argv[1]
|
||||
model_archive_local_path = sys.argv[2]
|
||||
|
||||
storage_client = storage.Client()
|
||||
blob = storage.Blob.from_string(uri=model_archive_uri, client=storage_client)
|
||||
blob.download_to_filename(filename=model_archive_local_path)
|
||||
' "$model_archive_uri" "$model_archive_local_path"
|
||||
|
||||
#Note: config.properties is owned by root. Our user is not root.
|
||||
echo "
|
||||
service_envelope=json
|
||||
# Needed for external access
|
||||
inference_address=http://0.0.0.0:8080
|
||||
management_address=http://0.0.0.0:8081
|
||||
" > config2.properties
|
||||
torchserve --start --foreground --no-config-snapshots --models main-model="$model_archive_local_path" --model-store ./model-store/ --ts-config config2.properties
|
||||
''',
|
||||
"$(AIP_STORAGE_URI)/" + model_archive_file_name,
|
||||
],
|
||||
serving_container_predict_route="/predictions/main-model",
|
||||
#serving_container_predict_route="/v1/models/main-model:predict",
|
||||
serving_container_health_route="/ping",
|
||||
serving_container_ports=[8080],
|
||||
|
||||
display_name=display_name,
|
||||
description=description,
|
||||
|
||||
# instance_schema_uri=instance_schema_uri,
|
||||
# parameters_schema_uri=parameters_schema_uri,
|
||||
# prediction_schema_uri=prediction_schema_uri,
|
||||
# explanation_metadata=explanation_metadata,
|
||||
# explanation_parameters=explanation_parameters,
|
||||
|
||||
project=project,
|
||||
location=location,
|
||||
labels=labels,
|
||||
# encryption_spec_key_name=encryption_spec_key_name,
|
||||
staging_bucket=staging_bucket,
|
||||
)
|
||||
model_json = json.dumps(model.to_dict(), indent=2)
|
||||
print(model_json)
|
||||
return (model.resource_name, model_json)
|
||||
|
||||
def _deserialize_bool(s) -> bool:
|
||||
from distutils.util import strtobool
|
||||
return strtobool(s) == 1
|
||||
|
||||
def _serialize_json(obj) -> str:
|
||||
if isinstance(obj, str):
|
||||
return obj
|
||||
import json
|
||||
def default_serializer(obj):
|
||||
if hasattr(obj, 'to_struct'):
|
||||
return obj.to_struct()
|
||||
else:
|
||||
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
|
||||
return json.dumps(obj, default=default_serializer, sort_keys=True)
|
||||
|
||||
def _serialize_str(str_value: str) -> str:
|
||||
if not isinstance(str_value, str):
|
||||
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
|
||||
return str_value
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Upload PyTorch model archive to Google Cloud Vertex AI', description='')
|
||||
_parser.add_argument("--model-archive", dest="model_archive_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--torchserve-version", dest="torchserve_version", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--use-gpu", dest="use_gpu", type=_deserialize_bool, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
_output_files = _parsed_args.pop("_output_paths", [])
|
||||
|
||||
_outputs = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI(**_parsed_args)
|
||||
|
||||
_output_serializers = [
|
||||
_serialize_str,
|
||||
_serialize_json,
|
||||
|
||||
]
|
||||
|
||||
import os
|
||||
for idx, output_file in enumerate(_output_files):
|
||||
try:
|
||||
os.makedirs(os.path.dirname(output_file))
|
||||
except OSError:
|
||||
pass
|
||||
with open(output_file, 'w') as f:
|
||||
f.write(_output_serializers[idx](_outputs[idx]))
|
||||
args:
|
||||
- --model-archive
|
||||
- {inputPath: model_archive}
|
||||
- if:
|
||||
cond: {isPresent: torchserve_version}
|
||||
then:
|
||||
- --torchserve-version
|
||||
- {inputValue: torchserve_version}
|
||||
- if:
|
||||
cond: {isPresent: use_gpu}
|
||||
then:
|
||||
- --use-gpu
|
||||
- {inputValue: use_gpu}
|
||||
- if:
|
||||
cond: {isPresent: display_name}
|
||||
then:
|
||||
- --display-name
|
||||
- {inputValue: display_name}
|
||||
- if:
|
||||
cond: {isPresent: description}
|
||||
then:
|
||||
- --description
|
||||
- {inputValue: description}
|
||||
- if:
|
||||
cond: {isPresent: project}
|
||||
then:
|
||||
- --project
|
||||
- {inputValue: project}
|
||||
- if:
|
||||
cond: {isPresent: location}
|
||||
then:
|
||||
- --location
|
||||
- {inputValue: location}
|
||||
- if:
|
||||
cond: {isPresent: labels}
|
||||
then:
|
||||
- --labels
|
||||
- {inputValue: labels}
|
||||
- if:
|
||||
cond: {isPresent: staging_bucket}
|
||||
then:
|
||||
- --staging-bucket
|
||||
- {inputValue: staging_bucket}
|
||||
- '----output-paths'
|
||||
- {outputPath: model_name}
|
||||
- {outputPath: model_dict}
|
||||
-181
@@ -1,181 +0,0 @@
|
||||
name: Upload Scikit learn pickle model to Google Cloud Vertex AI
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml'}
|
||||
inputs:
|
||||
- {name: model, type: ScikitLearnPickleModel}
|
||||
- {name: sklearn_version, type: String, optional: true}
|
||||
- {name: display_name, type: String, optional: true}
|
||||
- {name: description, type: String, optional: true}
|
||||
- {name: project, type: String, optional: true}
|
||||
- {name: location, type: String, optional: true}
|
||||
- {name: labels, type: JsonObject, optional: true}
|
||||
- {name: staging_bucket, type: String, optional: true}
|
||||
outputs:
|
||||
- {name: model_name, type: String}
|
||||
- {name: model_dict, type: JsonObject}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'google-cloud-aiplatform==1.16.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
|
||||
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.16.0'
|
||||
--user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI(
|
||||
model_path,
|
||||
sklearn_version = None,
|
||||
|
||||
display_name = None,
|
||||
description = None,
|
||||
|
||||
# Uncomment when anyone requests these:
|
||||
# instance_schema_uri: str = None,
|
||||
# parameters_schema_uri: str = None,
|
||||
# prediction_schema_uri: str = None,
|
||||
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
|
||||
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
|
||||
|
||||
project = None,
|
||||
location = None,
|
||||
labels = None,
|
||||
# encryption_spec_key_name: str = None,
|
||||
staging_bucket = None,
|
||||
):
|
||||
import json
|
||||
import os
|
||||
import shutil
|
||||
import tempfile
|
||||
from google.cloud import aiplatform
|
||||
|
||||
if not location:
|
||||
location = os.environ.get("CLOUD_ML_REGION")
|
||||
|
||||
if not labels:
|
||||
labels = {}
|
||||
labels["component-source"] = "github-com-ark-kun-pipeline-components"
|
||||
|
||||
# The serving container decides the model type based on the model file extension.
|
||||
# So we need to rename the mode file (e.g. /tmp/inputs/model/data) to *.pkl
|
||||
_, renamed_model_path = tempfile.mkstemp(suffix=".pkl")
|
||||
shutil.copyfile(src=model_path, dst=renamed_model_path)
|
||||
|
||||
model = aiplatform.Model.upload_scikit_learn_model_file(
|
||||
model_file_path=renamed_model_path,
|
||||
sklearn_version=sklearn_version,
|
||||
|
||||
display_name=display_name,
|
||||
description=description,
|
||||
|
||||
# instance_schema_uri=instance_schema_uri,
|
||||
# parameters_schema_uri=parameters_schema_uri,
|
||||
# prediction_schema_uri=prediction_schema_uri,
|
||||
# explanation_metadata=explanation_metadata,
|
||||
# explanation_parameters=explanation_parameters,
|
||||
|
||||
project=project,
|
||||
location=location,
|
||||
labels=labels,
|
||||
# encryption_spec_key_name=encryption_spec_key_name,
|
||||
staging_bucket=staging_bucket,
|
||||
)
|
||||
model_json = json.dumps(model.to_dict(), indent=2)
|
||||
print(model_json)
|
||||
return (model.resource_name, model_json)
|
||||
|
||||
def _serialize_json(obj) -> str:
|
||||
if isinstance(obj, str):
|
||||
return obj
|
||||
import json
|
||||
def default_serializer(obj):
|
||||
if hasattr(obj, 'to_struct'):
|
||||
return obj.to_struct()
|
||||
else:
|
||||
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
|
||||
return json.dumps(obj, default=default_serializer, sort_keys=True)
|
||||
|
||||
def _serialize_str(str_value: str) -> str:
|
||||
if not isinstance(str_value, str):
|
||||
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
|
||||
return str_value
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Upload Scikit learn pickle model to Google Cloud Vertex AI', description='')
|
||||
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--sklearn-version", dest="sklearn_version", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
_output_files = _parsed_args.pop("_output_paths", [])
|
||||
|
||||
_outputs = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI(**_parsed_args)
|
||||
|
||||
_output_serializers = [
|
||||
_serialize_str,
|
||||
_serialize_json,
|
||||
|
||||
]
|
||||
|
||||
import os
|
||||
for idx, output_file in enumerate(_output_files):
|
||||
try:
|
||||
os.makedirs(os.path.dirname(output_file))
|
||||
except OSError:
|
||||
pass
|
||||
with open(output_file, 'w') as f:
|
||||
f.write(_output_serializers[idx](_outputs[idx]))
|
||||
args:
|
||||
- --model
|
||||
- {inputPath: model}
|
||||
- if:
|
||||
cond: {isPresent: sklearn_version}
|
||||
then:
|
||||
- --sklearn-version
|
||||
- {inputValue: sklearn_version}
|
||||
- if:
|
||||
cond: {isPresent: display_name}
|
||||
then:
|
||||
- --display-name
|
||||
- {inputValue: display_name}
|
||||
- if:
|
||||
cond: {isPresent: description}
|
||||
then:
|
||||
- --description
|
||||
- {inputValue: description}
|
||||
- if:
|
||||
cond: {isPresent: project}
|
||||
then:
|
||||
- --project
|
||||
- {inputValue: project}
|
||||
- if:
|
||||
cond: {isPresent: location}
|
||||
then:
|
||||
- --location
|
||||
- {inputValue: location}
|
||||
- if:
|
||||
cond: {isPresent: labels}
|
||||
then:
|
||||
- --labels
|
||||
- {inputValue: labels}
|
||||
- if:
|
||||
cond: {isPresent: staging_bucket}
|
||||
then:
|
||||
- --staging-bucket
|
||||
- {inputValue: staging_bucket}
|
||||
- '----output-paths'
|
||||
- {outputPath: model_name}
|
||||
- {outputPath: model_dict}
|
||||
-190
@@ -1,190 +0,0 @@
|
||||
name: Upload Tensorflow model to Google Cloud Vertex AI
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml'}
|
||||
inputs:
|
||||
- {name: model, type: TensorflowSavedModel}
|
||||
- {name: tensorflow_version, type: String, optional: true}
|
||||
- name: use_gpu
|
||||
type: Boolean
|
||||
default: "False"
|
||||
optional: true
|
||||
- {name: display_name, type: String, optional: true}
|
||||
- {name: description, type: String, optional: true}
|
||||
- {name: project, type: String, optional: true}
|
||||
- {name: location, type: String, optional: true}
|
||||
- {name: labels, type: JsonObject, optional: true}
|
||||
- {name: staging_bucket, type: String, optional: true}
|
||||
outputs:
|
||||
- {name: model_name, type: String}
|
||||
- {name: model_dict, type: JsonObject}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'google-cloud-aiplatform==1.16.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
|
||||
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.16.0'
|
||||
--user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def upload_Tensorflow_model_to_Google_Cloud_Vertex_AI(
|
||||
model_path,
|
||||
tensorflow_version = None,
|
||||
use_gpu = False,
|
||||
|
||||
display_name = None,
|
||||
description = None,
|
||||
|
||||
# Uncomment when anyone requests these:
|
||||
# instance_schema_uri: str = None,
|
||||
# parameters_schema_uri: str = None,
|
||||
# prediction_schema_uri: str = None,
|
||||
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
|
||||
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
|
||||
|
||||
project = None,
|
||||
location = None,
|
||||
labels = None,
|
||||
# encryption_spec_key_name: str = None,
|
||||
staging_bucket = None,
|
||||
):
|
||||
import json
|
||||
import os
|
||||
from google.cloud import aiplatform
|
||||
|
||||
if not location:
|
||||
location = os.environ.get("CLOUD_ML_REGION")
|
||||
|
||||
if not labels:
|
||||
labels = {}
|
||||
labels["component-source"] = "github-com-ark-kun-pipeline-components"
|
||||
|
||||
model = aiplatform.Model.upload_tensorflow_saved_model(
|
||||
saved_model_dir=model_path,
|
||||
tensorflow_version=tensorflow_version,
|
||||
use_gpu=use_gpu,
|
||||
|
||||
display_name=display_name,
|
||||
description=description,
|
||||
|
||||
# instance_schema_uri=instance_schema_uri,
|
||||
# parameters_schema_uri=parameters_schema_uri,
|
||||
# prediction_schema_uri=prediction_schema_uri,
|
||||
# explanation_metadata=explanation_metadata,
|
||||
# explanation_parameters=explanation_parameters,
|
||||
|
||||
project=project,
|
||||
location=location,
|
||||
labels=labels,
|
||||
# encryption_spec_key_name=encryption_spec_key_name,
|
||||
staging_bucket=staging_bucket,
|
||||
)
|
||||
model_json = json.dumps(model.to_dict(), indent=2)
|
||||
print(model_json)
|
||||
return (model.resource_name, model_json)
|
||||
|
||||
def _deserialize_bool(s) -> bool:
|
||||
from distutils.util import strtobool
|
||||
return strtobool(s) == 1
|
||||
|
||||
def _serialize_json(obj) -> str:
|
||||
if isinstance(obj, str):
|
||||
return obj
|
||||
import json
|
||||
def default_serializer(obj):
|
||||
if hasattr(obj, 'to_struct'):
|
||||
return obj.to_struct()
|
||||
else:
|
||||
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
|
||||
return json.dumps(obj, default=default_serializer, sort_keys=True)
|
||||
|
||||
def _serialize_str(str_value: str) -> str:
|
||||
if not isinstance(str_value, str):
|
||||
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
|
||||
return str_value
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Upload Tensorflow model to Google Cloud Vertex AI', description='')
|
||||
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--tensorflow-version", dest="tensorflow_version", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--use-gpu", dest="use_gpu", type=_deserialize_bool, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
_output_files = _parsed_args.pop("_output_paths", [])
|
||||
|
||||
_outputs = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI(**_parsed_args)
|
||||
|
||||
_output_serializers = [
|
||||
_serialize_str,
|
||||
_serialize_json,
|
||||
|
||||
]
|
||||
|
||||
import os
|
||||
for idx, output_file in enumerate(_output_files):
|
||||
try:
|
||||
os.makedirs(os.path.dirname(output_file))
|
||||
except OSError:
|
||||
pass
|
||||
with open(output_file, 'w') as f:
|
||||
f.write(_output_serializers[idx](_outputs[idx]))
|
||||
args:
|
||||
- --model
|
||||
- {inputPath: model}
|
||||
- if:
|
||||
cond: {isPresent: tensorflow_version}
|
||||
then:
|
||||
- --tensorflow-version
|
||||
- {inputValue: tensorflow_version}
|
||||
- if:
|
||||
cond: {isPresent: use_gpu}
|
||||
then:
|
||||
- --use-gpu
|
||||
- {inputValue: use_gpu}
|
||||
- if:
|
||||
cond: {isPresent: display_name}
|
||||
then:
|
||||
- --display-name
|
||||
- {inputValue: display_name}
|
||||
- if:
|
||||
cond: {isPresent: description}
|
||||
then:
|
||||
- --description
|
||||
- {inputValue: description}
|
||||
- if:
|
||||
cond: {isPresent: project}
|
||||
then:
|
||||
- --project
|
||||
- {inputValue: project}
|
||||
- if:
|
||||
cond: {isPresent: location}
|
||||
then:
|
||||
- --location
|
||||
- {inputValue: location}
|
||||
- if:
|
||||
cond: {isPresent: labels}
|
||||
then:
|
||||
- --labels
|
||||
- {inputValue: labels}
|
||||
- if:
|
||||
cond: {isPresent: staging_bucket}
|
||||
then:
|
||||
- --staging-bucket
|
||||
- {inputValue: staging_bucket}
|
||||
- '----output-paths'
|
||||
- {outputPath: model_name}
|
||||
- {outputPath: model_dict}
|
||||
-181
@@ -1,181 +0,0 @@
|
||||
name: Upload XGBoost model to Google Cloud Vertex AI
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml'}
|
||||
inputs:
|
||||
- {name: model, type: XGBoostModel}
|
||||
- {name: xgboost_version, type: String, optional: true}
|
||||
- {name: display_name, type: String, optional: true}
|
||||
- {name: description, type: String, optional: true}
|
||||
- {name: project, type: String, optional: true}
|
||||
- {name: location, type: String, optional: true}
|
||||
- {name: labels, type: JsonObject, optional: true}
|
||||
- {name: staging_bucket, type: String, optional: true}
|
||||
outputs:
|
||||
- {name: model_name, type: String}
|
||||
- {name: model_dict, type: JsonObject}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'google-cloud-aiplatform==1.16.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
|
||||
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.16.0'
|
||||
--user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def upload_XGBoost_model_to_Google_Cloud_Vertex_AI(
|
||||
model_path,
|
||||
xgboost_version = None,
|
||||
|
||||
display_name = None,
|
||||
description = None,
|
||||
|
||||
# Uncomment when anyone requests these:
|
||||
# instance_schema_uri: str = None,
|
||||
# parameters_schema_uri: str = None,
|
||||
# prediction_schema_uri: str = None,
|
||||
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
|
||||
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
|
||||
|
||||
project = None,
|
||||
location = None,
|
||||
labels = None,
|
||||
# encryption_spec_key_name: str = None,
|
||||
staging_bucket = None,
|
||||
):
|
||||
import json
|
||||
import os
|
||||
import shutil
|
||||
import tempfile
|
||||
from google.cloud import aiplatform
|
||||
|
||||
if not location:
|
||||
location = os.environ.get("CLOUD_ML_REGION")
|
||||
|
||||
if not labels:
|
||||
labels = {}
|
||||
labels["component-source"] = "github-com-ark-kun-pipeline-components"
|
||||
|
||||
# The serving container decides the model type based on the model file extension.
|
||||
# So we need to rename the mode file (e.g. /tmp/inputs/model/data) to *.pkl
|
||||
_, renamed_model_path = tempfile.mkstemp(suffix=".pkl")
|
||||
shutil.copyfile(src=model_path, dst=renamed_model_path)
|
||||
|
||||
model = aiplatform.Model.upload_xgboost_model_file(
|
||||
model_file_path=renamed_model_path,
|
||||
xgboost_version=xgboost_version,
|
||||
|
||||
display_name=display_name,
|
||||
description=description,
|
||||
|
||||
# instance_schema_uri=instance_schema_uri,
|
||||
# parameters_schema_uri=parameters_schema_uri,
|
||||
# prediction_schema_uri=prediction_schema_uri,
|
||||
# explanation_metadata=explanation_metadata,
|
||||
# explanation_parameters=explanation_parameters,
|
||||
|
||||
project=project,
|
||||
location=location,
|
||||
labels=labels,
|
||||
# encryption_spec_key_name=encryption_spec_key_name,
|
||||
staging_bucket=staging_bucket,
|
||||
)
|
||||
model_json = json.dumps(model.to_dict(), indent=2)
|
||||
print(model_json)
|
||||
return (model.resource_name, model_json)
|
||||
|
||||
def _serialize_json(obj) -> str:
|
||||
if isinstance(obj, str):
|
||||
return obj
|
||||
import json
|
||||
def default_serializer(obj):
|
||||
if hasattr(obj, 'to_struct'):
|
||||
return obj.to_struct()
|
||||
else:
|
||||
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
|
||||
return json.dumps(obj, default=default_serializer, sort_keys=True)
|
||||
|
||||
def _serialize_str(str_value: str) -> str:
|
||||
if not isinstance(str_value, str):
|
||||
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
|
||||
return str_value
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Upload XGBoost model to Google Cloud Vertex AI', description='')
|
||||
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--xgboost-version", dest="xgboost_version", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
_output_files = _parsed_args.pop("_output_paths", [])
|
||||
|
||||
_outputs = upload_XGBoost_model_to_Google_Cloud_Vertex_AI(**_parsed_args)
|
||||
|
||||
_output_serializers = [
|
||||
_serialize_str,
|
||||
_serialize_json,
|
||||
|
||||
]
|
||||
|
||||
import os
|
||||
for idx, output_file in enumerate(_output_files):
|
||||
try:
|
||||
os.makedirs(os.path.dirname(output_file))
|
||||
except OSError:
|
||||
pass
|
||||
with open(output_file, 'w') as f:
|
||||
f.write(_output_serializers[idx](_outputs[idx]))
|
||||
args:
|
||||
- --model
|
||||
- {inputPath: model}
|
||||
- if:
|
||||
cond: {isPresent: xgboost_version}
|
||||
then:
|
||||
- --xgboost-version
|
||||
- {inputValue: xgboost_version}
|
||||
- if:
|
||||
cond: {isPresent: display_name}
|
||||
then:
|
||||
- --display-name
|
||||
- {inputValue: display_name}
|
||||
- if:
|
||||
cond: {isPresent: description}
|
||||
then:
|
||||
- --description
|
||||
- {inputValue: description}
|
||||
- if:
|
||||
cond: {isPresent: project}
|
||||
then:
|
||||
- --project
|
||||
- {inputValue: project}
|
||||
- if:
|
||||
cond: {isPresent: location}
|
||||
then:
|
||||
- --location
|
||||
- {inputValue: location}
|
||||
- if:
|
||||
cond: {isPresent: labels}
|
||||
then:
|
||||
- --labels
|
||||
- {inputValue: labels}
|
||||
- if:
|
||||
cond: {isPresent: staging_bucket}
|
||||
then:
|
||||
- --staging-bucket
|
||||
- {inputValue: staging_bucket}
|
||||
- '----output-paths'
|
||||
- {outputPath: model_name}
|
||||
- {outputPath: model_dict}
|
||||
@@ -1,35 +0,0 @@
|
||||
name: Download from GCS
|
||||
inputs:
|
||||
- {name: GCS path, type: String}
|
||||
outputs:
|
||||
- {name: Data}
|
||||
metadata:
|
||||
annotations:
|
||||
author: Alexey Volkov <alexey.volkov@ark-kun.com>
|
||||
canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml'
|
||||
implementation:
|
||||
container:
|
||||
image: google/cloud-sdk
|
||||
command:
|
||||
- bash # Pattern comparison only works in Bash
|
||||
- -ex
|
||||
- -c
|
||||
- |
|
||||
if [ -n "${GOOGLE_APPLICATION_CREDENTIALS}" ]; then
|
||||
gcloud auth activate-service-account --key-file="${GOOGLE_APPLICATION_CREDENTIALS}"
|
||||
fi
|
||||
|
||||
uri="$0"
|
||||
output_path="$1"
|
||||
|
||||
# Checking whether the URI points to a single blob, a directory or a URI pattern
|
||||
# URI points to a blob when that URI does not end with slash and listing that URI only yields the same URI
|
||||
if [[ "$uri" != */ ]] && (gsutil ls "$uri" | grep --fixed-strings --line-regexp "$uri"); then
|
||||
mkdir -p "$(dirname "$output_path")"
|
||||
gsutil -m cp -r "$uri" "$output_path"
|
||||
else
|
||||
mkdir -p "$output_path" # When source path is a directory, gsutil requires the destination to also be a directory
|
||||
gsutil -m rsync -r "$uri" "$output_path" # gsutil cp has different path handling than Linux cp. It always puts the source directory (name) inside the destination directory. gsutil rsync does not have that problem.
|
||||
fi
|
||||
- inputValue: GCS path
|
||||
- outputPath: Data
|
||||
-112
@@ -1,112 +0,0 @@
|
||||
name: Load image classification model from tfhub
|
||||
description: |
|
||||
Loads specified model from TFHub, creates layer to receive additional (3 channel) imagery data.
|
||||
Args:
|
||||
class_names (Sequence[str]):
|
||||
Sequence of strings of categories for classification corresponding to input data.
|
||||
loaded_model_path (str):
|
||||
Output path for the loaded model.
|
||||
image_size_path (str):
|
||||
Output path for the model expected image size.
|
||||
model_name (Optional[str]):
|
||||
Name of the pre-trained image classification model to load from TFHub.
|
||||
Eligible model_name:
|
||||
- efficientnetv2-s
|
||||
- efficientnetv2-m
|
||||
- efficientnetv2-l
|
||||
- efficientnetv2-s-21k
|
||||
- efficientnetv2-m-21k
|
||||
- efficientnetv2-l-21k
|
||||
- efficientnetv2-xl-21k
|
||||
- efficientnetv2-b0-21k
|
||||
- efficientnetv2-b1-21k
|
||||
- efficientnetv2-b2-21k
|
||||
- efficientnetv2-b3-21k
|
||||
- efficientnetv2-s-21k-ft1k
|
||||
- efficientnetv2-m-21k-ft1k
|
||||
- efficientnetv2-l-21k-ft1k
|
||||
- efficientnetv2-xl-21k-ft1k
|
||||
- efficientnetv2-b0-21k-ft1k
|
||||
- efficientnetv2-b1-21k-ft1k
|
||||
- efficientnetv2-b2-21k-ft1k
|
||||
- efficientnetv2-b3-21k-ft1k
|
||||
- efficientnetv2-b0
|
||||
- efficientnetv2-b1
|
||||
- efficientnetv2-b2
|
||||
- efficientnetv2-b3
|
||||
- efficientnet_b0
|
||||
- efficientnet_b1
|
||||
- efficientnet_b2
|
||||
- efficientnet_b3
|
||||
- efficientnet_b4
|
||||
- efficientnet_b5
|
||||
- efficientnet_b6
|
||||
- efficientnet_b7
|
||||
- bit_s-r50x1
|
||||
- inception_v3
|
||||
- inception_resnet_v2
|
||||
- resnet_v1_50
|
||||
- resnet_v1_101
|
||||
- resnet_v1_152
|
||||
- resnet_v2_50
|
||||
- resnet_v2_101
|
||||
- resnet_v2_152
|
||||
- nasnet_large
|
||||
- nasnet_mobile
|
||||
- pnasnet_large
|
||||
- mobilenet_v2_100_224
|
||||
- mobilenet_v2_130_224
|
||||
- mobilenet_v2_140_224
|
||||
- mobilenet_v3_small_100_224
|
||||
- mobilenet_v3_small_075_224
|
||||
- mobilenet_v3_large_100_224
|
||||
- mobilenet_v3_large_075_224
|
||||
dropout_rate (Optional[float]):
|
||||
Fraction of input units to drop in the last layer. Value should be between 0.0 and 1.0.
|
||||
trainable (Optional[bool]):
|
||||
If true fine tuning will be performed on entire Hub model. If false only additional
|
||||
layers will be trained.
|
||||
l2_regularization_penalty (Optional[float]):
|
||||
l2 regularization penalty.
|
||||
inputs:
|
||||
- {name: class_names, type: 'typing.List[str]', description: List of class names corresponding
|
||||
to the input image data}
|
||||
- {name: model_name, type: String, description: Name of the TFHub model to load, default: efficientnetv2-xl-21k,
|
||||
optional: true}
|
||||
- {name: dropout_rate, type: Float, description: Dropout rate, default: '0.2', optional: true}
|
||||
- name: trainable
|
||||
type: Boolean
|
||||
description: True if fine tuning should be performed
|
||||
default: "True"
|
||||
optional: true
|
||||
- {name: l2_regularization_penalty, type: Float, description: Regularization penalty,
|
||||
default: '0.0001', optional: true}
|
||||
outputs:
|
||||
- {name: loaded_model_path, type: TensorflowSavedModel, description: Output path for
|
||||
the loaded model}
|
||||
- {name: image_size_path, type: HeightWidth}
|
||||
implementation:
|
||||
container:
|
||||
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
|
||||
# command is a list of strings (command-line arguments).
|
||||
# The YAML language has two syntaxes for lists and you can use either of them.
|
||||
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
|
||||
command: [
|
||||
python3,
|
||||
# Path of the program inside the container
|
||||
/pipelines/component/src/loading_component.py,
|
||||
--loaded-model-path,
|
||||
{outputPath: loaded_model_path},
|
||||
--class-names,
|
||||
{inputValue: class_names},
|
||||
--model-name,
|
||||
{inputValue: model_name},
|
||||
--dropout-rate,
|
||||
{inputValue: dropout_rate},
|
||||
--trainable,
|
||||
{inputValue: trainable},
|
||||
--l2-regularization-penalty,
|
||||
{inputValue: l2_regularization_penalty},
|
||||
--image-size-path,
|
||||
{outputPath: image_size_path},
|
||||
]
|
||||
@@ -1,62 +0,0 @@
|
||||
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
|
||||
from kfp import components
|
||||
from kfp.v2 import dsl
|
||||
|
||||
# %% Loading components
|
||||
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml')
|
||||
deploy_model_to_endpoint_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml')
|
||||
transcode_imagedataset_tfrecord_from_csv_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/community-content/pipeline_components/image_ml_model_training/transcode_tfrecord_image_dataset_from_csv/component.yaml')
|
||||
load_image_classification_model_from_tfhub_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/b5b65198a6c2ffe8c0fa2aa70127e3325752df68/community-content/pipeline_components/image_ml_model_training/load_image_classification_model/component.yaml')
|
||||
preprocess_image_data_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/community-content/pipeline_components/image_ml_model_training/preprocess_image_data/component.yaml')
|
||||
train_tensorflow_image_classification_model_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/community-content/pipeline_components/image_ml_model_training/train_image_classification_model/component.yaml')
|
||||
|
||||
|
||||
# %% Pipeline definition
|
||||
def image_classification_pipeline():
|
||||
class_names = ['daisy', 'dandelion', 'roses', 'sunflowers', 'tulips']
|
||||
csv_image_data_path = 'gs://cloud-samples-data/ai-platform/flowers/flowers.csv'
|
||||
deploy_model = False
|
||||
|
||||
image_data = dsl.importer(
|
||||
artifact_uri=csv_image_data_path, artifact_class=dsl.Dataset).output
|
||||
|
||||
image_tfrecord_data = transcode_imagedataset_tfrecord_from_csv_op(
|
||||
csv_image_data_path=image_data,
|
||||
class_names=class_names
|
||||
).outputs['tfrecord_image_data_path']
|
||||
|
||||
loaded_model_outputs = load_image_classification_model_from_tfhub_op(
|
||||
class_names=class_names,
|
||||
).outputs
|
||||
|
||||
preprocessed_data = preprocess_image_data_op(
|
||||
image_tfrecord_data,
|
||||
height_width_path=loaded_model_outputs['image_size_path'],
|
||||
).outputs
|
||||
|
||||
trained_model = (train_tensorflow_image_classification_model_op(
|
||||
preprocessed_training_data_path = preprocessed_data['preprocessed_training_data_path'],
|
||||
preprocessed_validation_data_path = preprocessed_data['preprocessed_validation_data_path'],
|
||||
model_path=loaded_model_outputs['loaded_model_path']).
|
||||
set_cpu_limit('96').
|
||||
set_memory_limit('128G').
|
||||
add_node_selector_constraint('cloud.google.com/gke-accelerator', 'NVIDIA_TESLA_A100').
|
||||
set_gpu_limit('8').
|
||||
outputs['trained_model_path'])
|
||||
|
||||
vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
|
||||
model=trained_model,
|
||||
).outputs['model_name']
|
||||
|
||||
# Deploying the model might incur additional costs over time
|
||||
if deploy_model:
|
||||
vertex_endpoint_name = deploy_model_to_endpoint_op(
|
||||
model_name=vertex_model_name,
|
||||
).outputs['endpoint_name']
|
||||
|
||||
pipeline_func = image_classification_pipeline
|
||||
|
||||
# %% Pipeline submission
|
||||
if __name__ == '__main__':
|
||||
from google.cloud import aiplatform
|
||||
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
|
||||
-57
@@ -1,57 +0,0 @@
|
||||
name: Preprocess image data
|
||||
description: |
|
||||
Preprocess the image data and split between train and validation.
|
||||
Args:
|
||||
input_data_path (str):
|
||||
Input path for the TFRecord image data. Data will be formatted as 'label' (encoded image
|
||||
label), and 'image_raw' (the binary string of the image data).
|
||||
height_width_path (str):
|
||||
Path to square height and width to resize images to. File should contain single float value.
|
||||
Value is dependent on training model.
|
||||
preprocessed_training_data_path (str):
|
||||
Output path for the TFRecord training data. Data will be formatted as 'label' (encoded image
|
||||
label), and 'image_raw' (the binary string of the image data).
|
||||
preprocessed_validation_data_path (str):
|
||||
Output path for the TFRecord validation data. Data will be formatted as 'label' (encoded
|
||||
image label), and 'image_raw' (the binary string of the image data).
|
||||
validation_split (Optional[float]):
|
||||
Fraction of data that will make up validation dataset. Value should be between 0.0 and 1.0.
|
||||
seed (Optional[int]):
|
||||
The global random seed to ensure the system gets a unique random sequence
|
||||
that is deterministic (https://www.tensorflow.org/api_docs/python/tf/random/set_seed).
|
||||
inputs:
|
||||
- {name: input_data_path, type: ImageDatasetTFRecord, description: 'Input path for
|
||||
the TFRecord image data,'}
|
||||
- {name: height_width_path, type: HeightWidth, description: 'Path to square height and width to
|
||||
resize images to,'}
|
||||
- {name: validation_split, type: Float, description: 'Fraction of data that will make
|
||||
up validation dataset,', default: '0.2', optional: true}
|
||||
- {name: seed, type: Integer, description: Random seed, default: '0', optional: true}
|
||||
outputs:
|
||||
- {name: preprocessed_training_data_path, type: ImageDatasetTFRecord, description: 'Output
|
||||
path for the training data,'}
|
||||
- {name: preprocessed_validation_data_path, type: ImageDatasetTFRecord, description: 'Output
|
||||
path for the validation data,'}
|
||||
implementation:
|
||||
container:
|
||||
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
|
||||
# command is a list of strings (command-line arguments).
|
||||
# The YAML language has two syntaxes for lists and you can use either of them.
|
||||
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
|
||||
command: [
|
||||
python3,
|
||||
# Path of the program inside the container
|
||||
/pipelines/component/src/preprocessing_component.py,
|
||||
--input-data-path,
|
||||
{inputPath: input_data_path},
|
||||
--height-width-path,
|
||||
{inputPath: height_width_path},
|
||||
--validation-split,
|
||||
{inputValue: validation_split},
|
||||
--seed,
|
||||
{inputValue: seed},
|
||||
--preprocessed-training-data-path,
|
||||
{outputPath: preprocessed_training_data_path},
|
||||
--preprocessed-validation-data-path,
|
||||
{outputPath: preprocessed_validation_data_path},
|
||||
]
|
||||
-90
@@ -1,90 +0,0 @@
|
||||
name: Train tensorflow image classification model
|
||||
description: |
|
||||
Creates a trained image classification TensorFlow model.
|
||||
Args:
|
||||
preprocessed_training_data_path (str):
|
||||
Input path to the TFRecord training data. Data will be formatted as 'label' (encoded image
|
||||
label), and 'image_raw' (the binary string of the image data).
|
||||
preprocessed_validation_data_path (str):
|
||||
Input path to the TFRecord validation data. Data will be formatted as 'label' (encoded
|
||||
image label), and 'image_raw' (the binary string of the image data).
|
||||
model_path (str):
|
||||
Input path to the loaded pre-trained model.
|
||||
trained_model_path (str):
|
||||
Output path to save the trained model to.
|
||||
optimizer_name (Optional[str]):
|
||||
Name of the tf.keras optimizer. Available optimizers are listed at
|
||||
https://keras.io/api/optimizers/
|
||||
optimizer_parameters (Optional[Dict[str, str]]):
|
||||
Optimizer parameters.
|
||||
loss_function_name (Optional[str]):
|
||||
Name of the loss function.
|
||||
loss_function_parameters (Optional[Dict[str, str]]):
|
||||
Loss function parameters.
|
||||
number_of_epochs (Optional[int]):
|
||||
Number of training iterations over data.
|
||||
metric_names (Optional[Sequence[str]]):
|
||||
List of tf.keras.metrics to be evaluated by the model during training and testing. Available
|
||||
metrics are listed at https://keras.io/api/metrics/.
|
||||
seed Optional(int):
|
||||
The global random seed to ensure the system gets a unique random sequence
|
||||
that is deterministic (https://www.tensorflow.org/api_docs/python/tf/random/set_seed).
|
||||
inputs:
|
||||
- {name: preprocessed_training_data_path, type: ImageDatasetTFRecord, description: 'Input
|
||||
path for the training data,'}
|
||||
- {name: preprocessed_validation_data_path, type: ImageDatasetTFRecord, description: 'Input
|
||||
path for the validation data,'}
|
||||
- {name: model_path, type: TensorflowSavedModel, description: 'Input path for the
|
||||
model,'}
|
||||
- {name: optimizer_name, type: String, description: 'Name of the optimizer,', default: SGD,
|
||||
optional: true}
|
||||
- {name: optimizer_parameters, type: 'typing.Dict[str, str]', description: 'Optimizer
|
||||
parameters,', default: '{}', optional: true}
|
||||
- {name: loss_function_name, type: String, description: 'Name of the loss function,',
|
||||
default: CategoricalCrossentropy, optional: true}
|
||||
- {name: loss_function_parameters, type: 'typing.Dict[str, str]', description: 'Loss
|
||||
function parameters,', default: '{}', optional: true}
|
||||
- {name: number_of_epochs, type: Integer, description: 'Number of epochs,', default: '10',
|
||||
optional: true}
|
||||
- {name: metric_names, type: 'typing.List[str]', description: 'List of metrics to
|
||||
use,', default: '["accuracy"]', optional: true}
|
||||
- {name: seed, type: Integer, description: 'Random seed,', default: '0', optional: true}
|
||||
- {name: batch_size, type: Integer, description: Batch size, default: '16', optional: true}
|
||||
outputs:
|
||||
- {name: trained_model_path, type: TensorflowSavedModel, description: 'Output path
|
||||
for the saved model,'}
|
||||
implementation:
|
||||
container:
|
||||
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
|
||||
# command is a list of strings (command-line arguments).
|
||||
# The YAML language has two syntaxes for lists and you can use either of them.
|
||||
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
|
||||
command: [
|
||||
python3,
|
||||
# Path of the program inside the container
|
||||
/pipelines/component/src/training_component.py,
|
||||
--preprocessed-training-data-path,
|
||||
{inputPath: preprocessed_training_data_path},
|
||||
--preprocessed-validation-data-path,
|
||||
{inputPath: preprocessed_validation_data_path},
|
||||
--model-path,
|
||||
{inputPath: model_path},
|
||||
--trained-model-path,
|
||||
{outputPath: trained_model_path},
|
||||
--optimizer-name,
|
||||
{inputValue: optimizer_name},
|
||||
--loss-function-name,
|
||||
{inputValue: loss_function_name},
|
||||
--number-of-epochs,
|
||||
{inputValue: number_of_epochs},
|
||||
--seed,
|
||||
{inputValue: seed},
|
||||
--batch-size,
|
||||
{inputValue: batch_size},
|
||||
--metric-names,
|
||||
{inputValue: metric_names},
|
||||
--optimizer-parameters,
|
||||
{inputValue: optimizer_parameters},
|
||||
--loss-function-parameters,
|
||||
{inputValue: loss_function_parameters},
|
||||
]
|
||||
-37
@@ -1,37 +0,0 @@
|
||||
name: Transcode imagedataset tfrecord from csv
|
||||
description: |
|
||||
Transcodes CSV Data into TFRecord file of TFExamples.
|
||||
Args:
|
||||
csv_image_data_path (str):
|
||||
Path to the CSV image data. Data must include 'image_filepath' (Path to image file) and
|
||||
'image_label' (output for a prediction) fields.
|
||||
class_names (Sequence[str]):
|
||||
Sequence of strings of categories for classification corresponding to input data.
|
||||
tfrecord_image_data_path (str):
|
||||
Output path for the TFRecord image data. Data will be formatted as 'label' (encoded image
|
||||
label), and 'image_raw' (the binary string of the image data).
|
||||
inputs:
|
||||
- {name: csv_image_data_path, type: ImageDatasetCSV, description: Input path for the
|
||||
CSV image data}
|
||||
- {name: class_names, type: 'typing.List[str]', description: List of class names corresponding
|
||||
to the input image data}
|
||||
outputs:
|
||||
- {name: tfrecord_image_data_path, type: ImageDatasetTFRecord, description: Output
|
||||
path for the TFRecord image data}
|
||||
implementation:
|
||||
container:
|
||||
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
|
||||
# command is a list of strings (command-line arguments).
|
||||
# The YAML language has two syntaxes for lists and you can use either of them.
|
||||
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
|
||||
command: [
|
||||
python3,
|
||||
# Path of the program inside the container
|
||||
/pipelines/component/src/transcoding_csv_component.py,
|
||||
--csv-image-data-path,
|
||||
{inputPath: csv_image_data_path},
|
||||
--tfrecord-image-data-path,
|
||||
{outputPath: tfrecord_image_data_path},
|
||||
--class-names,
|
||||
{inputValue: class_names},
|
||||
]
|
||||
-39
@@ -1,39 +0,0 @@
|
||||
name: Transcode imagedataset tfrecord from jsonlines
|
||||
description: |
|
||||
Transcodes JSONL Data into TFRecord file of TFExamples.
|
||||
Args:
|
||||
jsonl_image_data_path (str):
|
||||
Input path for the JSONL image data
|
||||
Path to the JSONL image data. Each line corresponds to a JSON input describing an image.
|
||||
Schema follows AutoML image classification JSONL format
|
||||
https://cloud.google.com/vertex-ai/docs/image-data/classification/prepare-data#json-lines.
|
||||
class_names (Sequence[str]):
|
||||
Sequence of strings of categories for classification corresponding to input data.
|
||||
tfrecord_image_data_path (str):
|
||||
Output path for the TFRecord image data. Data will be formatted as 'label' (encoded image
|
||||
label), and 'image_raw' (the binary string of the image data).
|
||||
inputs:
|
||||
- {name: jsonl_image_data_path, type: ImageDatasetJsonLines, description: Input path
|
||||
for the JSONL image data}
|
||||
- {name: class_names, type: 'typing.List[str]', description: List of class names corresponding
|
||||
to the input image data}
|
||||
outputs:
|
||||
- {name: tfrecord_image_data_path, type: ImageDatasetTFRecord, description: Output
|
||||
path for the TFRecord image data}
|
||||
implementation:
|
||||
container:
|
||||
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
|
||||
# command is a list of strings (command-line arguments).
|
||||
# The YAML language has two syntaxes for lists and you can use either of them.
|
||||
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
|
||||
command: [
|
||||
python3,
|
||||
# Path of the program inside the container
|
||||
/pipelines/component/src/transcoding_jsonl_component.py,
|
||||
--jsonl-image-data-path,
|
||||
{inputPath: jsonl_image_data_path},
|
||||
--tfrecord-image-data-path,
|
||||
{outputPath: tfrecord_image_data_path},
|
||||
--class-names,
|
||||
{inputValue: class_names},
|
||||
]
|
||||
-113
@@ -1,113 +0,0 @@
|
||||
name: Binarize column using Pandas on CSV data
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/pandas/Binarize_column/in_CSV_format/component.yaml'}
|
||||
inputs:
|
||||
- {name: table, type: CSV}
|
||||
- {name: column_name, type: String}
|
||||
- {name: predicate, type: String, default: '> 0', optional: true}
|
||||
- {name: new_column_name, type: String, optional: true}
|
||||
- name: keep_original_column
|
||||
type: Boolean
|
||||
default: "False"
|
||||
optional: true
|
||||
outputs:
|
||||
- {name: transformed_table, type: CSV}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
|
||||
--no-warn-script-location 'pandas==1.4.3' --user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def binarize_column_using_Pandas_on_CSV_data(
|
||||
table_path,
|
||||
transformed_table_path,
|
||||
column_name,
|
||||
predicate = "> 0",
|
||||
new_column_name = None,
|
||||
keep_original_column = False,
|
||||
):
|
||||
import pandas
|
||||
|
||||
df = pandas.read_csv(table_path).convert_dtypes()
|
||||
original_series = df[column_name]
|
||||
|
||||
# Dynamically executing the predicate code
|
||||
# Variable namespace for code execution
|
||||
namespace = dict(x=original_series)
|
||||
# I though that there should be no space before `predicate` so that "dot" predicate methods like ".between(min, max)" work.
|
||||
# However Python allows spaces before dot: `df .isna()`.
|
||||
# So having a space is not a problem
|
||||
transform_code = f"""new_series_boolean = x {predicate}"""
|
||||
# Note: exec() takes no keyword arguments
|
||||
# exec(__source=transform_code, __globals=namespace)
|
||||
exec(transform_code, namespace)
|
||||
new_series_boolean = namespace["new_series_boolean"]
|
||||
|
||||
# There are multiple ways to convert boolean column to integer.
|
||||
# .apply(int) might be faster. https://stackoverflow.com/a/49804868/1497385
|
||||
# TODO: Do a proper benchmark.
|
||||
new_series = new_series_boolean.apply(int)
|
||||
# new_series = new_series_boolean.astype(int)
|
||||
# new_series = new_series_boolean.replace({False: 0, True: 1})
|
||||
|
||||
if new_column_name:
|
||||
df.insert(loc=0, column=new_column_name, value=new_series)
|
||||
if not keep_original_column:
|
||||
df = df.drop(columns=[column_name])
|
||||
else:
|
||||
df[column_name] = new_series
|
||||
|
||||
df.to_csv(transformed_table_path, index=False)
|
||||
|
||||
def _deserialize_bool(s) -> bool:
|
||||
from distutils.util import strtobool
|
||||
return strtobool(s) == 1
|
||||
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Binarize column using Pandas on CSV data', description='')
|
||||
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--column-name", dest="column_name", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--predicate", dest="predicate", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--new-column-name", dest="new_column_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--keep-original-column", dest="keep_original_column", type=_deserialize_bool, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--transformed-table", dest="transformed_table_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = binarize_column_using_Pandas_on_CSV_data(**_parsed_args)
|
||||
args:
|
||||
- --table
|
||||
- {inputPath: table}
|
||||
- --column-name
|
||||
- {inputValue: column_name}
|
||||
- if:
|
||||
cond: {isPresent: predicate}
|
||||
then:
|
||||
- --predicate
|
||||
- {inputValue: predicate}
|
||||
- if:
|
||||
cond: {isPresent: new_column_name}
|
||||
then:
|
||||
- --new-column-name
|
||||
- {inputValue: new_column_name}
|
||||
- if:
|
||||
cond: {isPresent: keep_original_column}
|
||||
then:
|
||||
- --keep-original-column
|
||||
- {inputValue: keep_original_column}
|
||||
- --transformed-table
|
||||
- {outputPath: transformed_table}
|
||||
-75
@@ -1,75 +0,0 @@
|
||||
name: Fill all missing values using Pandas on CSV data
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml'}
|
||||
inputs:
|
||||
- {name: table, type: CSV}
|
||||
- {name: replacement_value, type: String, default: '0', optional: true}
|
||||
- {name: column_names, type: JsonArray, optional: true}
|
||||
outputs:
|
||||
- {name: transformed_table, type: CSV}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'pandas==1.4.1' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
|
||||
--no-warn-script-location 'pandas==1.4.1' --user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def fill_all_missing_values_using_Pandas_on_CSV_data(
|
||||
table_path,
|
||||
transformed_table_path,
|
||||
replacement_value = "0",
|
||||
column_names = None,
|
||||
):
|
||||
import pandas
|
||||
|
||||
df = pandas.read_csv(
|
||||
table_path,
|
||||
dtype="string",
|
||||
)
|
||||
|
||||
for column_name in column_names or df.columns:
|
||||
df[column_name] = df[column_name].fillna(value=replacement_value)
|
||||
|
||||
df.to_csv(
|
||||
transformed_table_path, index=False,
|
||||
)
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Fill all missing values using Pandas on CSV data', description='')
|
||||
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--replacement-value", dest="replacement_value", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--column-names", dest="column_names", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--transformed-table", dest="transformed_table_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = fill_all_missing_values_using_Pandas_on_CSV_data(**_parsed_args)
|
||||
args:
|
||||
- --table
|
||||
- {inputPath: table}
|
||||
- if:
|
||||
cond: {isPresent: replacement_value}
|
||||
then:
|
||||
- --replacement-value
|
||||
- {inputValue: replacement_value}
|
||||
- if:
|
||||
cond: {isPresent: column_names}
|
||||
then:
|
||||
- --column-names
|
||||
- {inputValue: column_names}
|
||||
- --transformed-table
|
||||
- {outputPath: transformed_table}
|
||||
-59
@@ -1,59 +0,0 @@
|
||||
name: Select columns using Pandas on CSV data
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/pandas/Select_columns/in_CSV_format/component.yaml'}
|
||||
inputs:
|
||||
- {name: table, type: CSV}
|
||||
- {name: column_names, type: JsonArray}
|
||||
outputs:
|
||||
- {name: transformed_table, type: CSV}
|
||||
implementation:
|
||||
container:
|
||||
image: python:3.9
|
||||
command:
|
||||
- sh
|
||||
- -c
|
||||
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
|
||||
'pandas==1.4.2' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
|
||||
--no-warn-script-location 'pandas==1.4.2' --user) && "$0" "$@"
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def select_columns_using_Pandas_on_CSV_data(
|
||||
table_path,
|
||||
transformed_table_path,
|
||||
column_names,
|
||||
):
|
||||
import pandas
|
||||
|
||||
df = pandas.read_csv(
|
||||
table_path,
|
||||
dtype="string",
|
||||
)
|
||||
df = df[column_names]
|
||||
df.to_csv(transformed_table_path, index=False)
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Select columns using Pandas on CSV data', description='')
|
||||
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--column-names", dest="column_names", type=json.loads, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--transformed-table", dest="transformed_table_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = select_columns_using_Pandas_on_CSV_data(**_parsed_args)
|
||||
args:
|
||||
- --table
|
||||
- {inputPath: table}
|
||||
- --column-names
|
||||
- {inputValue: column_names}
|
||||
- --transformed-table
|
||||
- {outputPath: transformed_table}
|
||||
-102
@@ -1,102 +0,0 @@
|
||||
name: Create fully connected tensorflow network
|
||||
description: Creates fully-connected network in Tensorflow SavedModel format
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/tensorflow/Create_fully_connected_network/component.yaml'}
|
||||
inputs:
|
||||
- {name: input_size, type: Integer}
|
||||
- {name: hidden_layer_sizes, type: JsonArray, default: '[]', optional: true}
|
||||
- {name: output_size, type: Integer, default: '1', optional: true}
|
||||
- {name: activation_name, type: String, default: relu, optional: true}
|
||||
- {name: output_activation_name, type: String, optional: true}
|
||||
- {name: random_seed, type: Integer, default: '0', optional: true}
|
||||
outputs:
|
||||
- {name: model, type: TensorflowSavedModel}
|
||||
implementation:
|
||||
container:
|
||||
image: tensorflow/tensorflow:2.7.0
|
||||
command:
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def create_fully_connected_tensorflow_network(
|
||||
input_size,
|
||||
model_path,
|
||||
hidden_layer_sizes = [],
|
||||
output_size = 1,
|
||||
activation_name = "relu",
|
||||
output_activation_name = None,
|
||||
random_seed = 0,
|
||||
):
|
||||
"""Creates fully-connected network in Tensorflow SavedModel format"""
|
||||
import tensorflow as tf
|
||||
tf.random.set_seed(seed=random_seed)
|
||||
|
||||
model = tf.keras.models.Sequential()
|
||||
model.add(tf.keras.Input(shape=(input_size,)))
|
||||
for layer_size in hidden_layer_sizes:
|
||||
model.add(tf.keras.layers.Dense(units=layer_size, activation=activation_name))
|
||||
# The last layer is left without activation
|
||||
model.add(tf.keras.layers.Dense(units=output_size, activation=output_activation_name))
|
||||
|
||||
print(model.summary())
|
||||
|
||||
# Using tf.keras.models.save_model instead of tf.saved_model.save to prevent downstream error:
|
||||
#tf.saved_model.save(model, model_path)
|
||||
# ValueError: Unable to create a Keras model from this SavedModel.
|
||||
# This SavedModel was created with `tf.saved_model.save`, and lacks the Keras metadata.
|
||||
# Please save your Keras model by calling `model.save`or `tf.keras.models.save_model`.
|
||||
# See https://github.com/keras-team/keras/issues/16451
|
||||
tf.keras.models.save_model(model, model_path)
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Create fully connected tensorflow network', description='Creates fully-connected network in Tensorflow SavedModel format')
|
||||
_parser.add_argument("--input-size", dest="input_size", type=int, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--hidden-layer-sizes", dest="hidden_layer_sizes", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--output-size", dest="output_size", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--activation-name", dest="activation_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--output-activation-name", dest="output_activation_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = create_fully_connected_tensorflow_network(**_parsed_args)
|
||||
args:
|
||||
- --input-size
|
||||
- {inputValue: input_size}
|
||||
- if:
|
||||
cond: {isPresent: hidden_layer_sizes}
|
||||
then:
|
||||
- --hidden-layer-sizes
|
||||
- {inputValue: hidden_layer_sizes}
|
||||
- if:
|
||||
cond: {isPresent: output_size}
|
||||
then:
|
||||
- --output-size
|
||||
- {inputValue: output_size}
|
||||
- if:
|
||||
cond: {isPresent: activation_name}
|
||||
then:
|
||||
- --activation-name
|
||||
- {inputValue: activation_name}
|
||||
- if:
|
||||
cond: {isPresent: output_activation_name}
|
||||
then:
|
||||
- --output-activation-name
|
||||
- {inputValue: output_activation_name}
|
||||
- if:
|
||||
cond: {isPresent: random_seed}
|
||||
then:
|
||||
- --random-seed
|
||||
- {inputValue: random_seed}
|
||||
- --model
|
||||
- {outputPath: model}
|
||||
@@ -1,100 +0,0 @@
|
||||
name: Predict with TensorFlow model on CSV data
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/tensorflow/Predict/on_CSV/component.yaml'}
|
||||
inputs:
|
||||
- {name: dataset, type: CSV}
|
||||
- {name: model, type: TensorflowSavedModel}
|
||||
- {name: label_column_name, type: String, optional: true}
|
||||
- {name: batch_size, type: Integer, default: '1000', optional: true}
|
||||
outputs:
|
||||
- {name: predictions}
|
||||
implementation:
|
||||
container:
|
||||
image: tensorflow/tensorflow:2.9.1
|
||||
command:
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def predict_with_TensorFlow_model_on_CSV_data(
|
||||
dataset_path,
|
||||
model_path,
|
||||
predictions_path,
|
||||
label_column_name = None,
|
||||
batch_size = 1000,
|
||||
):
|
||||
import numpy
|
||||
import tensorflow as tf
|
||||
|
||||
model = tf.saved_model.load(export_dir=model_path)
|
||||
|
||||
dataset = tf.data.experimental.make_csv_dataset(
|
||||
file_pattern=dataset_path,
|
||||
batch_size=batch_size,
|
||||
label_name=label_column_name,
|
||||
header=True,
|
||||
num_epochs=1,
|
||||
shuffle=False,
|
||||
ignore_errors=False,
|
||||
)
|
||||
|
||||
def stack_feature_batches(features_batch):
|
||||
# Need to stack individual feature columns to create a single feature tensor
|
||||
# Need to cast all column tensor types to float to prevent errors.
|
||||
list_of_feature_batches = list(
|
||||
tf.cast(x=feature_batch, dtype=tf.float32)
|
||||
for feature_batch in features_batch.values()
|
||||
)
|
||||
return tf.stack(list_of_feature_batches, axis=-1)
|
||||
|
||||
def transform_features_and_drop_labels(features_batch, labels_batch):
|
||||
return stack_feature_batches(features_batch)
|
||||
|
||||
dataset_map_fn = (
|
||||
transform_features_and_drop_labels
|
||||
if label_column_name
|
||||
else stack_feature_batches
|
||||
)
|
||||
|
||||
dataset = dataset.map(dataset_map_fn)
|
||||
|
||||
with open(predictions_path, "w") as predictions_file:
|
||||
for features_batch in dataset:
|
||||
predictions_tensor = model(features_batch)
|
||||
numpy.savetxt(predictions_file, predictions_tensor.numpy())
|
||||
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Predict with TensorFlow model on CSV data', description='')
|
||||
_parser.add_argument("--dataset", dest="dataset_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--batch-size", dest="batch_size", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--predictions", dest="predictions_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = predict_with_TensorFlow_model_on_CSV_data(**_parsed_args)
|
||||
args:
|
||||
- --dataset
|
||||
- {inputPath: dataset}
|
||||
- --model
|
||||
- {inputPath: model}
|
||||
- if:
|
||||
cond: {isPresent: label_column_name}
|
||||
then:
|
||||
- --label-column-name
|
||||
- {inputValue: label_column_name}
|
||||
- if:
|
||||
cond: {isPresent: batch_size}
|
||||
then:
|
||||
- --batch-size
|
||||
- {inputValue: batch_size}
|
||||
- --predictions
|
||||
- {outputPath: predictions}
|
||||
-170
@@ -1,170 +0,0 @@
|
||||
name: Train model using Keras on CSV
|
||||
metadata:
|
||||
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml'}
|
||||
inputs:
|
||||
- {name: training_data, type: CSV}
|
||||
- {name: model, type: TensorflowSavedModel}
|
||||
- {name: label_column_name, type: String}
|
||||
- {name: loss_function_name, type: String, default: mean_squared_error, optional: true}
|
||||
- {name: number_of_epochs, type: Integer, default: '1', optional: true}
|
||||
- {name: learning_rate, type: Float, default: '0.1', optional: true}
|
||||
- {name: optimizer_name, type: String, default: Adadelta, optional: true}
|
||||
- {name: optimizer_parameters, type: JsonObject, optional: true}
|
||||
- {name: batch_size, type: Integer, default: '32', optional: true}
|
||||
- {name: metric_names, type: JsonArray, optional: true}
|
||||
- {name: random_seed, type: Integer, default: '0', optional: true}
|
||||
outputs:
|
||||
- {name: trained_model, type: TensorflowSavedModel}
|
||||
implementation:
|
||||
container:
|
||||
image: tensorflow/tensorflow:2.8.0
|
||||
command:
|
||||
- sh
|
||||
- -ec
|
||||
- |
|
||||
program_path=$(mktemp)
|
||||
printf "%s" "$0" > "$program_path"
|
||||
python3 -u "$program_path" "$@"
|
||||
- |
|
||||
def _make_parent_dirs_and_return_path(file_path: str):
|
||||
import os
|
||||
os.makedirs(os.path.dirname(file_path), exist_ok=True)
|
||||
return file_path
|
||||
|
||||
def train_model_using_Keras_on_CSV(
|
||||
training_data_path,
|
||||
model_path,
|
||||
trained_model_path,
|
||||
label_column_name,
|
||||
loss_function_name = "mean_squared_error",
|
||||
number_of_epochs = 1,
|
||||
learning_rate = 0.1,
|
||||
optimizer_name = "Adadelta",
|
||||
optimizer_parameters = None,
|
||||
batch_size = 32,
|
||||
metric_names = None,
|
||||
random_seed = 0,
|
||||
):
|
||||
import tensorflow as tf
|
||||
tf.random.set_seed(seed=random_seed)
|
||||
|
||||
# Loading model using Keras. Model loaded using TensorFlow does not have .fit.
|
||||
#model = tf.saved_model.load(export_dir=model_path)
|
||||
keras_model = tf.keras.models.load_model(filepath=model_path)
|
||||
|
||||
optimizer_parameters = optimizer_parameters or {}
|
||||
optimizer_parameters["learning_rate"] = learning_rate
|
||||
optimizer_config = {
|
||||
"class_name": optimizer_name,
|
||||
"config": optimizer_parameters,
|
||||
}
|
||||
optimizer = tf.keras.optimizers.get(optimizer_config)
|
||||
loss = tf.keras.losses.get(loss_function_name)
|
||||
|
||||
training_dataset = tf.data.experimental.make_csv_dataset(
|
||||
file_pattern=training_data_path,
|
||||
batch_size=batch_size,
|
||||
label_name=label_column_name,
|
||||
header=True,
|
||||
# Need to specify num_epochs=1 otherwise the training becomes infinite
|
||||
num_epochs=1,
|
||||
shuffle=True,
|
||||
shuffle_seed=random_seed,
|
||||
ignore_errors=True,
|
||||
)
|
||||
def stack_feature_batches(features_batch, labels_batch):
|
||||
# Need to stack individual feature columns to create a single feature tensor
|
||||
# Need to cast all column tensor types to float to prevent error:
|
||||
# TypeError: Tensors in list passed to 'values' of 'Pack' Op have types [int32, float32, float32, int32, int32] that don't all match.
|
||||
list_of_feature_batches = list(tf.cast(x=feature_batch, dtype=tf.float32) for feature_batch in features_batch.values())
|
||||
return tf.stack(list_of_feature_batches, axis=-1), labels_batch
|
||||
|
||||
training_dataset = training_dataset.map(stack_feature_batches)
|
||||
|
||||
# Need to compile the model to prevent error:
|
||||
# ValueError: No gradients provided for any variable: [..., ...].
|
||||
keras_model.compile(
|
||||
optimizer=optimizer,
|
||||
loss=loss,
|
||||
metrics=metric_names,
|
||||
)
|
||||
keras_model.fit(
|
||||
training_dataset,
|
||||
epochs=number_of_epochs,
|
||||
)
|
||||
|
||||
# Using tf.keras.models.save_model instead of tf.saved_model.save to prevent downstream error:
|
||||
#tf.saved_model.save(keras_model, trained_model_path)
|
||||
# ValueError: Unable to create a Keras model from this SavedModel.
|
||||
# This SavedModel was created with `tf.saved_model.save`, and lacks the Keras metadata.
|
||||
# Please save your Keras model by calling `model.save`or `tf.keras.models.save_model`.
|
||||
# See https://github.com/keras-team/keras/issues/16451
|
||||
tf.keras.models.save_model(keras_model, trained_model_path)
|
||||
|
||||
import json
|
||||
import argparse
|
||||
_parser = argparse.ArgumentParser(prog='Train model using Keras on CSV', description='')
|
||||
_parser.add_argument("--training-data", dest="training_data_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--loss-function-name", dest="loss_function_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--number-of-epochs", dest="number_of_epochs", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--learning-rate", dest="learning_rate", type=float, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--optimizer-name", dest="optimizer_name", type=str, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--optimizer-parameters", dest="optimizer_parameters", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--batch-size", dest="batch_size", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--metric-names", dest="metric_names", type=json.loads, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
|
||||
_parser.add_argument("--trained-model", dest="trained_model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
|
||||
_parsed_args = vars(_parser.parse_args())
|
||||
|
||||
_outputs = train_model_using_Keras_on_CSV(**_parsed_args)
|
||||
args:
|
||||
- --training-data
|
||||
- {inputPath: training_data}
|
||||
- --model
|
||||
- {inputPath: model}
|
||||
- --label-column-name
|
||||
- {inputValue: label_column_name}
|
||||
- if:
|
||||
cond: {isPresent: loss_function_name}
|
||||
then:
|
||||
- --loss-function-name
|
||||
- {inputValue: loss_function_name}
|
||||
- if:
|
||||
cond: {isPresent: number_of_epochs}
|
||||
then:
|
||||
- --number-of-epochs
|
||||
- {inputValue: number_of_epochs}
|
||||
- if:
|
||||
cond: {isPresent: learning_rate}
|
||||
then:
|
||||
- --learning-rate
|
||||
- {inputValue: learning_rate}
|
||||
- if:
|
||||
cond: {isPresent: optimizer_name}
|
||||
then:
|
||||
- --optimizer-name
|
||||
- {inputValue: optimizer_name}
|
||||
- if:
|
||||
cond: {isPresent: optimizer_parameters}
|
||||
then:
|
||||
- --optimizer-parameters
|
||||
- {inputValue: optimizer_parameters}
|
||||
- if:
|
||||
cond: {isPresent: batch_size}
|
||||
then:
|
||||
- --batch-size
|
||||
- {inputValue: batch_size}
|
||||
- if:
|
||||
cond: {isPresent: metric_names}
|
||||
then:
|
||||
- --metric-names
|
||||
- {inputValue: metric_names}
|
||||
- if:
|
||||
cond: {isPresent: random_seed}
|
||||
then:
|
||||
- --random-seed
|
||||
- {inputValue: random_seed}
|
||||
- --trained-model
|
||||
- {outputPath: trained_model}
|
||||
-1507
File diff suppressed because it is too large
Load Diff
@@ -1,33 +0,0 @@
|
||||
# PyTorch Efficient Training Examples
|
||||
|
||||
This folder provides PyTorch efficient training examples using ResNet-50 and ImageNet data.
|
||||
|
||||
## Requirements
|
||||
|
||||
```shell
|
||||
pip install --upgrade pip
|
||||
pip install -r requirements.txt
|
||||
```
|
||||
|
||||
## Description
|
||||
|
||||
* resnet.py - Train ResNet-50 on single GPU.
|
||||
* resnet_dp.py - Train ResNet-50 on single node multiple GPUs with `DataParallel` strategy.
|
||||
* resnet_ddp.py - Train ResNet-50 on single node multiple GPUs with `DistributedDataParallel` strategy.
|
||||
* resnet_ddp_wds.py - Train ResNet-50 on single node multiple GPUs with `DistributedDataParallel` strategy and `Webdataset`.
|
||||
* resnet_fsdp.py - Train ResNet-50 on single node multiple GPUs with `FullyShardedDataParallel` strategy.
|
||||
* resnet_fsdp_wds.py - Train ResNet-50 on single node multiple GPUs with `FullyShardedDataParallel` strategy and `Webdataset`.
|
||||
* shard_imagenet.py - Shard ImagNet individual files into `tar` files.
|
||||
|
||||
## Benchmark
|
||||
|
||||
When run the benchmark on Nvidia T4 GPUs using ImageNet validation dataset, you can get the result like:
|
||||
Strategy | Seconds/Epoch - Local Data | Seconds/Epoch - Cloud Data
|
||||
---------------------- | -------------------------- | --------------------------
|
||||
On 1 GPU | 489 | 804 (2x slower)
|
||||
On 4 GPUs (DP) | 157 | 738 (5x slower)
|
||||
On 4 GPUs (DDP) | 134 | 432 (3x slower)
|
||||
On 4 GPUs (DDP + WDS) | 131 | 133 (same performance)
|
||||
On 4 GPUs (FSDP) | 139 | 353 (3x slower)
|
||||
On 4 GPUs (FSDP + WDS) | 138 | 135 (same performance)
|
||||
|
||||
@@ -1 +0,0 @@
|
||||
webdataset == 0.2.26
|
||||
@@ -1,197 +0,0 @@
|
||||
# Copyright 2022 Google LLC
|
||||
#
|
||||
# Licensed under the Apache License, Version 2.0 (the \"License\");
|
||||
# you may not use this file except in compliance with the License.\n",
|
||||
# You may obtain a copy of the License at
|
||||
#
|
||||
# http://www.apache.org/licenses/LICENSE-2.0
|
||||
#
|
||||
# Unless required by applicable law or agreed to in writing, software
|
||||
# distributed under the License is distributed on an \"AS IS\" BASIS,
|
||||
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
"""Train resnet on single GPU."""
|
||||
|
||||
import argparse
|
||||
import time
|
||||
|
||||
from PIL import Image
|
||||
import torch
|
||||
from torch import nn
|
||||
import torchmetrics
|
||||
import torchvision
|
||||
from torchvision.models import resnet50
|
||||
|
||||
|
||||
class ImageFolder(torchvision.datasets.ImageFolder):
|
||||
"""Class for loading imagenet."""
|
||||
|
||||
def __init__(self, image_list_file, transform=None, target_transform=None):
|
||||
self.samples = self._make_dataset(image_list_file)
|
||||
self.loader = self._loader
|
||||
|
||||
self.imgs = self.samples
|
||||
self.targets = [s[1] for s in self.samples]
|
||||
|
||||
self.transform = transform
|
||||
self.target_transform = target_transform
|
||||
|
||||
def _make_dataset(self, image_list_file):
|
||||
items = []
|
||||
with open(image_list_file, 'r') as f:
|
||||
for line in f:
|
||||
item = line.strip().split(' ')
|
||||
items.append((item[0], int(item[1])))
|
||||
return items
|
||||
|
||||
def _loader(self, image_path):
|
||||
with open(image_path, 'rb') as f:
|
||||
img = Image.open(f)
|
||||
img = img.convert('RGB')
|
||||
return img
|
||||
|
||||
|
||||
def train(model, device, dataloader, optimizer):
|
||||
model.train()
|
||||
for image, target in dataloader:
|
||||
image, target = image.to(device), target.to(device)
|
||||
pred = model(image)
|
||||
# pred.shape (N, C), target.shape (N)
|
||||
loss = nn.functional.cross_entropy(pred, target)
|
||||
optimizer.zero_grad()
|
||||
loss.backward()
|
||||
optimizer.step()
|
||||
return loss
|
||||
|
||||
|
||||
def evaluate(model, device, dataloader, metric):
|
||||
model.eval()
|
||||
with torch.no_grad():
|
||||
for image, target in dataloader:
|
||||
image, target = image.to(device), target.to(device)
|
||||
pred = model(image)
|
||||
metric.update(pred, target)
|
||||
accuracy = metric.compute()
|
||||
metric.reset()
|
||||
return accuracy
|
||||
|
||||
|
||||
def run_training(args):
|
||||
"""Run training and evaluation."""
|
||||
# Create model.
|
||||
model = resnet50(weights=None)
|
||||
model = model.to(args.device)
|
||||
|
||||
# Create train dataloader.
|
||||
train_dataset = ImageFolder(
|
||||
image_list_file=args.train_data_path,
|
||||
transform=torchvision.transforms.Compose([
|
||||
torchvision.transforms.RandomResizedCrop(224),
|
||||
torchvision.transforms.RandomHorizontalFlip(),
|
||||
torchvision.transforms.ToTensor(),
|
||||
torchvision.transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
]))
|
||||
train_dataloader = torch.utils.data.DataLoader(
|
||||
dataset=train_dataset,
|
||||
batch_size=args.train_batch_size,
|
||||
shuffle=True,
|
||||
num_workers=args.dataloader_num_workers,
|
||||
pin_memory=True)
|
||||
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
|
||||
f'num workers: {train_dataloader.num_workers}, '
|
||||
f'batch size: {args.train_batch_size}, '
|
||||
f'batches/epoch: {len(train_dataloader)}')
|
||||
|
||||
# Create eval dataloader.
|
||||
eval_dataset = ImageFolder(
|
||||
image_list_file=args.eval_data_path,
|
||||
transform=torchvision.transforms.Compose([
|
||||
torchvision.transforms.Resize(256),
|
||||
torchvision.transforms.CenterCrop(224),
|
||||
torchvision.transforms.ToTensor(),
|
||||
torchvision.transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
]))
|
||||
eval_dataloader = torch.utils.data.DataLoader(
|
||||
dataset=eval_dataset,
|
||||
batch_size=args.eval_batch_size,
|
||||
shuffle=False,
|
||||
num_workers=args.dataloader_num_workers,
|
||||
pin_memory=True,
|
||||
drop_last=True)
|
||||
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
|
||||
f'num workers: {eval_dataloader.num_workers}, '
|
||||
f'batch size: {args.eval_batch_size}, '
|
||||
f'batches/epoch: {len(eval_dataloader)}')
|
||||
|
||||
# Optimizer.
|
||||
optimizer = torch.optim.SGD(model.parameters(), 0.1)
|
||||
|
||||
# Main loop.
|
||||
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
|
||||
for epoch in range(1, args.epochs + 1):
|
||||
print(f'Running epoch {epoch}')
|
||||
|
||||
start = time.time()
|
||||
train(model, args.device, train_dataloader, optimizer)
|
||||
end = time.time()
|
||||
print(f'Training finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
start = time.time()
|
||||
evaluate(model, args.device, eval_dataloader, metric)
|
||||
end = time.time()
|
||||
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
|
||||
print('Done')
|
||||
|
||||
|
||||
def create_args():
|
||||
"""Create main args."""
|
||||
parser = argparse.ArgumentParser(
|
||||
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
|
||||
parser.add_argument(
|
||||
'--epochs',
|
||||
default=1,
|
||||
type=int,
|
||||
help='number of total epochs to run')
|
||||
parser.add_argument(
|
||||
'--dataloader_num_workers',
|
||||
default=2,
|
||||
type=int,
|
||||
help='number of workders for dataloader')
|
||||
parser.add_argument(
|
||||
'--train_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to training data')
|
||||
parser.add_argument(
|
||||
'--train_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for training')
|
||||
parser.add_argument(
|
||||
'--eval_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to evaluation data')
|
||||
parser.add_argument(
|
||||
'--eval_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for evaluation')
|
||||
args = parser.parse_args()
|
||||
return args
|
||||
|
||||
|
||||
def main():
|
||||
args = create_args()
|
||||
args.device = torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')
|
||||
|
||||
print('Launch job on 1 GPU')
|
||||
run_training(args)
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
main()
|
||||
@@ -1,234 +0,0 @@
|
||||
# Copyright 2022 Google LLC
|
||||
#
|
||||
# Licensed under the Apache License, Version 2.0 (the \"License\");
|
||||
# you may not use this file except in compliance with the License.\n",
|
||||
# You may obtain a copy of the License at
|
||||
#
|
||||
# http://www.apache.org/licenses/LICENSE-2.0
|
||||
#
|
||||
# Unless required by applicable law or agreed to in writing, software
|
||||
# distributed under the License is distributed on an \"AS IS\" BASIS,
|
||||
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
"""Train resnet on multiple GPUs with DDP."""
|
||||
|
||||
import argparse
|
||||
import os
|
||||
import time
|
||||
|
||||
from PIL import Image
|
||||
import torch
|
||||
from torch import nn
|
||||
import torch.distributed as dist
|
||||
import torch.multiprocessing as mp
|
||||
import torchmetrics
|
||||
import torchvision
|
||||
from torchvision.models import resnet50
|
||||
|
||||
|
||||
class ImageFolder(torchvision.datasets.ImageFolder):
|
||||
"""Class for loading imagenet."""
|
||||
|
||||
def __init__(self, image_list_file, transform=None, target_transform=None):
|
||||
self.samples = self._make_dataset(image_list_file)
|
||||
self.loader = self._loader
|
||||
|
||||
self.imgs = self.samples
|
||||
self.targets = [s[1] for s in self.samples]
|
||||
|
||||
self.transform = transform
|
||||
self.target_transform = target_transform
|
||||
|
||||
def _make_dataset(self, image_list_file):
|
||||
items = []
|
||||
with open(image_list_file, 'r') as f:
|
||||
for line in f:
|
||||
item = line.strip().split(' ')
|
||||
items.append((item[0], int(item[1])))
|
||||
return items
|
||||
|
||||
def _loader(self, image_path):
|
||||
with open(image_path, 'rb') as f:
|
||||
img = Image.open(f)
|
||||
img = img.convert('RGB')
|
||||
return img
|
||||
|
||||
|
||||
def train(model, device, dataloader, optimizer):
|
||||
model.train()
|
||||
for image, target in dataloader:
|
||||
image = image.to(device, non_blocking=True)
|
||||
target = target.to(device, non_blocking=True)
|
||||
pred = model(image)
|
||||
# pred.shape (N, C), target.shape (N)
|
||||
loss = nn.functional.cross_entropy(pred, target)
|
||||
optimizer.zero_grad()
|
||||
loss.backward()
|
||||
optimizer.step()
|
||||
return loss
|
||||
|
||||
|
||||
def evaluate(model, device, dataloader, metric):
|
||||
model.eval()
|
||||
with torch.no_grad():
|
||||
for image, target in dataloader:
|
||||
image = image.to(device, non_blocking=True)
|
||||
target = target.to(device, non_blocking=True)
|
||||
pred = model(image)
|
||||
metric.update(pred, target)
|
||||
accuracy = metric.compute()
|
||||
metric.reset()
|
||||
return accuracy
|
||||
|
||||
|
||||
def worker(gpu, args):
|
||||
"""Run training and evaluation."""
|
||||
# Init process group.
|
||||
print(f'Initiating process {gpu}')
|
||||
dist.init_process_group(
|
||||
backend='nccl',
|
||||
init_method='env://',
|
||||
world_size=args.gpus,
|
||||
rank=gpu)
|
||||
|
||||
# Create model.
|
||||
model = resnet50(weights=None)
|
||||
torch.cuda.set_device(gpu)
|
||||
model.to(args.device)
|
||||
model = torch.nn.SyncBatchNorm.convert_sync_batchnorm(model)
|
||||
model = nn.parallel.DistributedDataParallel(model, device_ids=[gpu])
|
||||
|
||||
# Create train dataloader.
|
||||
train_dataset = ImageFolder(
|
||||
image_list_file=args.train_data_path,
|
||||
transform=torchvision.transforms.Compose([
|
||||
torchvision.transforms.RandomResizedCrop(224),
|
||||
torchvision.transforms.RandomHorizontalFlip(),
|
||||
torchvision.transforms.ToTensor(),
|
||||
torchvision.transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
]))
|
||||
train_sampler = torch.utils.data.distributed.DistributedSampler(
|
||||
train_dataset, num_replicas=args.gpus, rank=gpu)
|
||||
train_dataloader = torch.utils.data.DataLoader(
|
||||
dataset=train_dataset,
|
||||
batch_size=args.train_batch_size,
|
||||
shuffle=False,
|
||||
num_workers=args.dataloader_num_workers,
|
||||
pin_memory=True,
|
||||
sampler=train_sampler)
|
||||
if gpu == 0:
|
||||
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
|
||||
f'num workers: {train_dataloader.num_workers}, '
|
||||
f'global batch size: {args.train_batch_size * args.gpus}, '
|
||||
f'batches/epoch: {len(train_dataloader)}')
|
||||
|
||||
# Create eval dataloader.
|
||||
eval_dataset = ImageFolder(
|
||||
image_list_file=args.eval_data_path,
|
||||
transform=torchvision.transforms.Compose([
|
||||
torchvision.transforms.Resize(256),
|
||||
torchvision.transforms.CenterCrop(224),
|
||||
torchvision.transforms.ToTensor(),
|
||||
torchvision.transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
]))
|
||||
eval_sampler = torch.utils.data.distributed.DistributedSampler(
|
||||
eval_dataset, num_replicas=args.gpus, rank=gpu)
|
||||
eval_dataloader = torch.utils.data.DataLoader(
|
||||
dataset=eval_dataset,
|
||||
batch_size=args.eval_batch_size,
|
||||
shuffle=False,
|
||||
num_workers=args.dataloader_num_workers,
|
||||
pin_memory=True,
|
||||
drop_last=True,
|
||||
sampler=eval_sampler)
|
||||
if gpu == 0:
|
||||
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
|
||||
f'num workers: {eval_dataloader.num_workers}, '
|
||||
f'batch size: {args.eval_batch_size}, '
|
||||
f'batches/epoch: {len(eval_dataloader)}')
|
||||
|
||||
# Optimizer.
|
||||
optimizer = torch.optim.SGD(model.parameters(), 0.1)
|
||||
|
||||
# Main loop.
|
||||
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
|
||||
for epoch in range(1, args.epochs + 1):
|
||||
if gpu == 0:
|
||||
print(f'Running epoch {epoch}')
|
||||
train_sampler.set_epoch(epoch)
|
||||
|
||||
start = time.time()
|
||||
train(model, args.device, train_dataloader, optimizer)
|
||||
end = time.time()
|
||||
if gpu == 0:
|
||||
print(f'Training finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
start = time.time()
|
||||
evaluate(model, args.device, eval_dataloader, metric)
|
||||
end = time.time()
|
||||
if gpu == 0:
|
||||
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
if gpu == 0:
|
||||
print('Done')
|
||||
|
||||
|
||||
def create_args():
|
||||
"""Create main args."""
|
||||
parser = argparse.ArgumentParser(
|
||||
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
|
||||
parser.add_argument(
|
||||
'--gpus',
|
||||
default=4,
|
||||
type=int,
|
||||
help='number of gpus to use')
|
||||
parser.add_argument(
|
||||
'--epochs',
|
||||
default=1,
|
||||
type=int,
|
||||
help='number of total epochs to run')
|
||||
parser.add_argument(
|
||||
'--dataloader_num_workers',
|
||||
default=2,
|
||||
type=int,
|
||||
help='number of workders for dataloader')
|
||||
parser.add_argument(
|
||||
'--train_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to training data')
|
||||
parser.add_argument(
|
||||
'--train_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for training per gpu')
|
||||
parser.add_argument(
|
||||
'--eval_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to evaluation data')
|
||||
parser.add_argument(
|
||||
'--eval_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for evaluation per gpu')
|
||||
args = parser.parse_args()
|
||||
return args
|
||||
|
||||
|
||||
def main():
|
||||
args = create_args()
|
||||
os.environ['MASTER_ADDR'] = 'localhost'
|
||||
os.environ['MASTER_PORT'] = '8888'
|
||||
|
||||
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
|
||||
print(f'Launch job on {args.gpus} GPUs with DDP')
|
||||
mp.spawn(worker, nprocs=args.gpus, args=(args,))
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
main()
|
||||
@@ -1,249 +0,0 @@
|
||||
# Copyright 2022 Google LLC
|
||||
#
|
||||
# Licensed under the Apache License, Version 2.0 (the \"License\");
|
||||
# you may not use this file except in compliance with the License.\n",
|
||||
# You may obtain a copy of the License at
|
||||
#
|
||||
# http://www.apache.org/licenses/LICENSE-2.0
|
||||
#
|
||||
# Unless required by applicable law or agreed to in writing, software
|
||||
# distributed under the License is distributed on an \"AS IS\" BASIS,
|
||||
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
"""Train resnet on multiple GPUs with DDP."""
|
||||
|
||||
import argparse
|
||||
import functools
|
||||
import itertools
|
||||
import math
|
||||
import os
|
||||
import time
|
||||
|
||||
import torch
|
||||
from torch import nn
|
||||
import torch.distributed as dist
|
||||
import torch.multiprocessing as mp
|
||||
import torchmetrics
|
||||
from torchvision.models import resnet50
|
||||
from torchvision.transforms import transforms
|
||||
import webdataset as wds
|
||||
|
||||
|
||||
def wds_split(src, rank, world_size):
|
||||
"""Shards split function for webdataset."""
|
||||
# The context of caller of this function is within multiple processes
|
||||
# (by DDP world_size) and multiple workers (by dataloader_num_workers).
|
||||
# So we totally have (world_size * num_workers) workers for processing data.
|
||||
# NOTE: Raw data should be sharded to enough shards to make sure one process
|
||||
# can handle at least one shard, otherwise the process may hang.
|
||||
worker_id = 0
|
||||
num_workers = 1
|
||||
worker_info = torch.utils.data.get_worker_info()
|
||||
if worker_info:
|
||||
worker_id = worker_info.id
|
||||
num_workers = worker_info.num_workers
|
||||
for s in itertools.islice(src, rank * num_workers + worker_id, None,
|
||||
world_size * num_workers):
|
||||
yield s
|
||||
|
||||
|
||||
def identity(x):
|
||||
return x
|
||||
|
||||
|
||||
def create_wds_dataloader(rank, args, mode):
|
||||
"""Create webdataset dataset and dataloader."""
|
||||
if mode == 'train':
|
||||
transform = transforms.Compose([
|
||||
transforms.RandomResizedCrop(224),
|
||||
transforms.RandomHorizontalFlip(),
|
||||
transforms.ToTensor(),
|
||||
transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
])
|
||||
data_path = args.train_data_path
|
||||
data_size = args.train_data_size
|
||||
batch_size_local = args.train_batch_size
|
||||
batch_size_global = args.train_batch_size * args.gpus
|
||||
# Since webdataset disallows partial batch, we pad the last batch for train.
|
||||
batches = int(math.ceil(data_size / batch_size_global))
|
||||
else:
|
||||
transform = transforms.Compose([
|
||||
transforms.Resize(256),
|
||||
transforms.CenterCrop(224),
|
||||
transforms.ToTensor(),
|
||||
transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
])
|
||||
data_path = args.eval_data_path
|
||||
data_size = args.eval_data_size
|
||||
batch_size_local = args.eval_batch_size
|
||||
batch_size_global = args.eval_batch_size * args.gpus
|
||||
# Since webdataset disallows partial batch, we drop the last batch for eval.
|
||||
batches = int(data_size / batch_size_global)
|
||||
|
||||
dataset = wds.DataPipeline(
|
||||
wds.SimpleShardList(data_path),
|
||||
functools.partial(wds_split, rank=rank, world_size=args.gpus),
|
||||
wds.tarfile_to_samples(),
|
||||
wds.decode('pil'),
|
||||
wds.to_tuple('jpg;png;jpeg cls'),
|
||||
wds.map_tuple(transform, identity),
|
||||
wds.batched(batch_size_local, partial=False),
|
||||
)
|
||||
num_workers = args.dataloader_num_workers
|
||||
dataloader = wds.WebLoader(
|
||||
dataset=dataset,
|
||||
batch_size=None,
|
||||
shuffle=False,
|
||||
num_workers=num_workers,
|
||||
persistent_workers=True if num_workers > 0 else False,
|
||||
pin_memory=True).repeat(nbatches=batches)
|
||||
print(f'{mode} dataloader | samples: {data_size}, '
|
||||
f'num_workers: {num_workers}, '
|
||||
f'local batch size: {batch_size_local}, '
|
||||
f'global batch size: {batch_size_global}, '
|
||||
f'batches: {batches}')
|
||||
return dataloader
|
||||
|
||||
|
||||
def train(model, device, dataloader, optimizer):
|
||||
model.train()
|
||||
for image, target in dataloader:
|
||||
image = image.to(device, non_blocking=True)
|
||||
target = target.to(device, non_blocking=True)
|
||||
pred = model(image)
|
||||
# pred.shape (N, C), target.shape (N)
|
||||
loss = nn.functional.cross_entropy(pred, target)
|
||||
optimizer.zero_grad()
|
||||
loss.backward()
|
||||
optimizer.step()
|
||||
return loss
|
||||
|
||||
|
||||
def evaluate(model, device, dataloader, metric):
|
||||
model.eval()
|
||||
with torch.no_grad():
|
||||
for image, target in dataloader:
|
||||
image = image.to(device, non_blocking=True)
|
||||
target = target.to(device, non_blocking=True)
|
||||
pred = model(image)
|
||||
metric.update(pred, target)
|
||||
accuracy = metric.compute()
|
||||
metric.reset()
|
||||
return accuracy
|
||||
|
||||
|
||||
def worker(gpu, args):
|
||||
"""Run training and evaluation."""
|
||||
# Init process group.
|
||||
print(f'Initiating process {gpu}')
|
||||
dist.init_process_group(
|
||||
backend='nccl',
|
||||
init_method='env://',
|
||||
world_size=args.gpus,
|
||||
rank=gpu)
|
||||
|
||||
# Create model.
|
||||
model = resnet50(weights=None)
|
||||
torch.cuda.set_device(gpu)
|
||||
model.to(args.device)
|
||||
model = torch.nn.SyncBatchNorm.convert_sync_batchnorm(model)
|
||||
model = nn.parallel.DistributedDataParallel(model, device_ids=[gpu])
|
||||
|
||||
# Create dataloader.
|
||||
train_dataloader = create_wds_dataloader(gpu, args, 'train')
|
||||
eval_dataloader = create_wds_dataloader(gpu, args, 'eval')
|
||||
|
||||
# Optimizer.
|
||||
optimizer = torch.optim.SGD(model.parameters(), 0.1)
|
||||
|
||||
# Main loop.
|
||||
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
|
||||
for epoch in range(1, args.epochs + 1):
|
||||
if gpu == 0:
|
||||
print(f'Running epoch {epoch}')
|
||||
|
||||
start = time.time()
|
||||
train(model, args.device, train_dataloader, optimizer)
|
||||
end = time.time()
|
||||
if gpu == 0:
|
||||
print(f'Training finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
start = time.time()
|
||||
evaluate(model, args.device, eval_dataloader, metric)
|
||||
end = time.time()
|
||||
if gpu == 0:
|
||||
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
if gpu == 0:
|
||||
print('Done')
|
||||
|
||||
|
||||
def create_args():
|
||||
"""Create main args."""
|
||||
parser = argparse.ArgumentParser(
|
||||
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
|
||||
parser.add_argument(
|
||||
'--gpus',
|
||||
default=4,
|
||||
type=int,
|
||||
help='number of gpus to use')
|
||||
parser.add_argument(
|
||||
'--epochs',
|
||||
default=1,
|
||||
type=int,
|
||||
help='number of total epochs to run')
|
||||
parser.add_argument(
|
||||
'--dataloader_num_workers',
|
||||
default=2,
|
||||
type=int,
|
||||
help='number of workders for dataloader')
|
||||
parser.add_argument(
|
||||
'--train_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to training data')
|
||||
parser.add_argument(
|
||||
'--train_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for training per gpu')
|
||||
parser.add_argument(
|
||||
'--train_data_size',
|
||||
default=50000,
|
||||
type=int,
|
||||
help='data size for training')
|
||||
parser.add_argument(
|
||||
'--eval_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to evaluation data')
|
||||
parser.add_argument(
|
||||
'--eval_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for evaluation per gpu')
|
||||
parser.add_argument(
|
||||
'--eval_data_size',
|
||||
default=50000,
|
||||
type=int,
|
||||
help='data size for evaluation')
|
||||
args = parser.parse_args()
|
||||
return args
|
||||
|
||||
|
||||
def main():
|
||||
args = create_args()
|
||||
os.environ['MASTER_ADDR'] = 'localhost'
|
||||
os.environ['MASTER_PORT'] = '8888'
|
||||
|
||||
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
|
||||
print(f'Launch job on {args.gpus} GPUs with DDP')
|
||||
mp.spawn(worker, nprocs=args.gpus, args=(args,))
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
main()
|
||||
@@ -1,207 +0,0 @@
|
||||
# Copyright 2022 Google LLC
|
||||
#
|
||||
# Licensed under the Apache License, Version 2.0 (the \"License\");
|
||||
# you may not use this file except in compliance with the License.\n",
|
||||
# You may obtain a copy of the License at
|
||||
#
|
||||
# http://www.apache.org/licenses/LICENSE-2.0
|
||||
#
|
||||
# Unless required by applicable law or agreed to in writing, software
|
||||
# distributed under the License is distributed on an \"AS IS\" BASIS,
|
||||
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
"""Train resnet on multiple GPUs with DP."""
|
||||
|
||||
import argparse
|
||||
import time
|
||||
|
||||
from PIL import Image
|
||||
import torch
|
||||
from torch import nn
|
||||
import torchmetrics
|
||||
import torchvision
|
||||
from torchvision.models import resnet50
|
||||
|
||||
|
||||
class ImageFolder(torchvision.datasets.ImageFolder):
|
||||
"""Class for loading imagenet."""
|
||||
|
||||
def __init__(self, image_list_file, transform=None, target_transform=None):
|
||||
self.samples = self._make_dataset(image_list_file)
|
||||
self.loader = self._loader
|
||||
|
||||
self.imgs = self.samples
|
||||
self.targets = [s[1] for s in self.samples]
|
||||
|
||||
self.transform = transform
|
||||
self.target_transform = target_transform
|
||||
|
||||
def _make_dataset(self, image_list_file):
|
||||
items = []
|
||||
with open(image_list_file, 'r') as f:
|
||||
for line in f:
|
||||
item = line.strip().split(' ')
|
||||
items.append((item[0], int(item[1])))
|
||||
return items
|
||||
|
||||
def _loader(self, image_path):
|
||||
with open(image_path, 'rb') as f:
|
||||
img = Image.open(f)
|
||||
img = img.convert('RGB')
|
||||
return img
|
||||
|
||||
|
||||
def train(model, device, dataloader, optimizer):
|
||||
model.train()
|
||||
for image, target in dataloader:
|
||||
image, target = image.to(device), target.to(device)
|
||||
pred = model(image)
|
||||
# pred.shape (N, C), target.shape (N)
|
||||
loss = nn.functional.cross_entropy(pred, target)
|
||||
optimizer.zero_grad()
|
||||
loss.backward()
|
||||
optimizer.step()
|
||||
return loss
|
||||
|
||||
|
||||
def evaluate(model, device, dataloader, metric):
|
||||
model.eval()
|
||||
with torch.no_grad():
|
||||
for image, target in dataloader:
|
||||
image, target = image.to(device), target.to(device)
|
||||
pred = model(image)
|
||||
metric.update(pred, target)
|
||||
accuracy = metric.compute()
|
||||
metric.reset()
|
||||
return accuracy
|
||||
|
||||
|
||||
def run_training(args):
|
||||
"""Run training and evaluation."""
|
||||
# Create model.
|
||||
model = resnet50(weights=None)
|
||||
model = nn.DataParallel(model)
|
||||
model = model.to(args.device)
|
||||
|
||||
# Create train dataloader.
|
||||
train_dataset = ImageFolder(
|
||||
image_list_file=args.train_data_path,
|
||||
transform=torchvision.transforms.Compose([
|
||||
torchvision.transforms.RandomResizedCrop(224),
|
||||
torchvision.transforms.RandomHorizontalFlip(),
|
||||
torchvision.transforms.ToTensor(),
|
||||
torchvision.transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
]))
|
||||
train_dataloader = torch.utils.data.DataLoader(
|
||||
dataset=train_dataset,
|
||||
batch_size=args.train_batch_size,
|
||||
shuffle=True,
|
||||
num_workers=args.dataloader_num_workers,
|
||||
pin_memory=True)
|
||||
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
|
||||
f'num workers: {train_dataloader.num_workers}, '
|
||||
f'global batch size: {args.train_batch_size}, '
|
||||
f'batches/epoch: {len(train_dataloader)}')
|
||||
|
||||
# Create eval dataloader.
|
||||
eval_dataset = ImageFolder(
|
||||
image_list_file=args.eval_data_path,
|
||||
transform=torchvision.transforms.Compose([
|
||||
torchvision.transforms.Resize(256),
|
||||
torchvision.transforms.CenterCrop(224),
|
||||
torchvision.transforms.ToTensor(),
|
||||
torchvision.transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
]))
|
||||
eval_dataloader = torch.utils.data.DataLoader(
|
||||
dataset=eval_dataset,
|
||||
batch_size=args.eval_batch_size,
|
||||
shuffle=False,
|
||||
num_workers=args.dataloader_num_workers,
|
||||
pin_memory=True,
|
||||
drop_last=True)
|
||||
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
|
||||
f'num workers: {eval_dataloader.num_workers}, '
|
||||
f'global batch size: {args.eval_batch_size}, '
|
||||
f'batches/epoch: {len(eval_dataloader)}')
|
||||
|
||||
# Optimizer.
|
||||
optimizer = torch.optim.SGD(model.parameters(), 0.1)
|
||||
|
||||
# Main loop.
|
||||
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
|
||||
for epoch in range(1, args.epochs + 1):
|
||||
print(f'Running epoch {epoch}')
|
||||
|
||||
start = time.time()
|
||||
train(model, args.device, train_dataloader, optimizer)
|
||||
end = time.time()
|
||||
print(f'Training finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
start = time.time()
|
||||
evaluate(model, args.device, eval_dataloader, metric)
|
||||
end = time.time()
|
||||
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
|
||||
print('Done')
|
||||
|
||||
|
||||
def create_args():
|
||||
"""Create main args."""
|
||||
parser = argparse.ArgumentParser(
|
||||
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
|
||||
parser.add_argument(
|
||||
'--gpus',
|
||||
default=4,
|
||||
type=int,
|
||||
help='number of gpus to use')
|
||||
parser.add_argument(
|
||||
'--epochs',
|
||||
default=1,
|
||||
type=int,
|
||||
help='number of total epochs to run')
|
||||
parser.add_argument(
|
||||
'--dataloader_num_workers',
|
||||
default=2,
|
||||
type=int,
|
||||
help='number of workders for dataloader')
|
||||
parser.add_argument(
|
||||
'--train_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to training data')
|
||||
parser.add_argument(
|
||||
'--train_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for training per gpu')
|
||||
parser.add_argument(
|
||||
'--eval_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to evaluation data')
|
||||
parser.add_argument(
|
||||
'--eval_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for evaluation per gpu')
|
||||
args = parser.parse_args()
|
||||
return args
|
||||
|
||||
|
||||
def main():
|
||||
args = create_args()
|
||||
|
||||
args.device = torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')
|
||||
args.train_batch_size *= args.gpus
|
||||
args.eval_batch_size *= args.gpus
|
||||
args.dataloader_num_workers *= args.gpus
|
||||
|
||||
print(f'Launch job on {args.gpus} GPU with nn.DataParallel')
|
||||
run_training(args)
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
main()
|
||||
@@ -1,242 +0,0 @@
|
||||
# Copyright 2022 Google LLC
|
||||
#
|
||||
# Licensed under the Apache License, Version 2.0 (the \"License\");
|
||||
# you may not use this file except in compliance with the License.\n",
|
||||
# You may obtain a copy of the License at
|
||||
#
|
||||
# http://www.apache.org/licenses/LICENSE-2.0
|
||||
#
|
||||
# Unless required by applicable law or agreed to in writing, software
|
||||
# distributed under the License is distributed on an \"AS IS\" BASIS,
|
||||
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
"""Train resnet on multiple GPUs with FSDP."""
|
||||
|
||||
import argparse
|
||||
import functools
|
||||
import os
|
||||
import time
|
||||
|
||||
from PIL import Image
|
||||
import torch
|
||||
from torch import nn
|
||||
import torch.distributed as dist
|
||||
from torch.distributed.fsdp import FullyShardedDataParallel as FSDP
|
||||
from torch.distributed.fsdp.wrap import size_based_auto_wrap_policy
|
||||
import torch.multiprocessing as mp
|
||||
import torchmetrics
|
||||
import torchvision
|
||||
from torchvision.models import resnet50
|
||||
|
||||
|
||||
class ImageFolder(torchvision.datasets.ImageFolder):
|
||||
"""Class for loading imagenet."""
|
||||
|
||||
def __init__(self, image_list_file, transform=None, target_transform=None):
|
||||
self.samples = self._make_dataset(image_list_file)
|
||||
self.loader = self._loader
|
||||
|
||||
self.imgs = self.samples
|
||||
self.targets = [s[1] for s in self.samples]
|
||||
|
||||
self.transform = transform
|
||||
self.target_transform = target_transform
|
||||
|
||||
def _make_dataset(self, image_list_file):
|
||||
items = []
|
||||
with open(image_list_file, 'r') as f:
|
||||
for line in f:
|
||||
item = line.strip().split(' ')
|
||||
items.append((item[0], int(item[1])))
|
||||
return items
|
||||
|
||||
def _loader(self, image_path):
|
||||
with open(image_path, 'rb') as f:
|
||||
img = Image.open(f)
|
||||
img = img.convert('RGB')
|
||||
return img
|
||||
|
||||
|
||||
def train(model, device, dataloader, optimizer):
|
||||
model.train()
|
||||
for image, target in dataloader:
|
||||
image = image.to(device, non_blocking=True)
|
||||
target = target.to(device, non_blocking=True)
|
||||
pred = model(image)
|
||||
# pred.shape (N, C), target.shape (N)
|
||||
loss = nn.functional.cross_entropy(pred, target)
|
||||
optimizer.zero_grad()
|
||||
loss.backward()
|
||||
optimizer.step()
|
||||
return loss
|
||||
|
||||
|
||||
def evaluate(model, device, dataloader, metric):
|
||||
model.eval()
|
||||
with torch.no_grad():
|
||||
for image, target in dataloader:
|
||||
image = image.to(device, non_blocking=True)
|
||||
target = target.to(device, non_blocking=True)
|
||||
pred = model(image)
|
||||
metric.update(pred, target)
|
||||
accuracy = metric.compute()
|
||||
metric.reset()
|
||||
return accuracy
|
||||
|
||||
|
||||
def worker(gpu, args):
|
||||
"""Run training and evaluation."""
|
||||
# Init process group.
|
||||
print(f'Initiating process {gpu}')
|
||||
dist.init_process_group(
|
||||
backend='nccl',
|
||||
init_method='env://',
|
||||
world_size=args.gpus,
|
||||
rank=gpu)
|
||||
|
||||
# Create train dataloader.
|
||||
train_dataset = ImageFolder(
|
||||
image_list_file=args.train_data_path,
|
||||
transform=torchvision.transforms.Compose([
|
||||
torchvision.transforms.RandomResizedCrop(224),
|
||||
torchvision.transforms.RandomHorizontalFlip(),
|
||||
torchvision.transforms.ToTensor(),
|
||||
torchvision.transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
]))
|
||||
train_sampler = torch.utils.data.distributed.DistributedSampler(
|
||||
train_dataset, num_replicas=args.gpus, rank=gpu)
|
||||
train_dataloader = torch.utils.data.DataLoader(
|
||||
dataset=train_dataset,
|
||||
batch_size=args.train_batch_size,
|
||||
shuffle=False,
|
||||
num_workers=args.dataloader_num_workers,
|
||||
pin_memory=True,
|
||||
sampler=train_sampler)
|
||||
if gpu == 0:
|
||||
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
|
||||
f'num workers: {train_dataloader.num_workers}, '
|
||||
f'global batch size: {args.train_batch_size * args.gpus}, '
|
||||
f'batches/epoch: {len(train_dataloader)}')
|
||||
|
||||
# Create eval dataloader.
|
||||
eval_dataset = ImageFolder(
|
||||
image_list_file=args.eval_data_path,
|
||||
transform=torchvision.transforms.Compose([
|
||||
torchvision.transforms.Resize(256),
|
||||
torchvision.transforms.CenterCrop(224),
|
||||
torchvision.transforms.ToTensor(),
|
||||
torchvision.transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
]))
|
||||
eval_sampler = torch.utils.data.distributed.DistributedSampler(
|
||||
eval_dataset, num_replicas=args.gpus, rank=gpu)
|
||||
eval_dataloader = torch.utils.data.DataLoader(
|
||||
dataset=eval_dataset,
|
||||
batch_size=args.eval_batch_size,
|
||||
shuffle=False,
|
||||
num_workers=args.dataloader_num_workers,
|
||||
pin_memory=True,
|
||||
drop_last=True,
|
||||
sampler=eval_sampler)
|
||||
if gpu == 0:
|
||||
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
|
||||
f'num workers: {eval_dataloader.num_workers}, '
|
||||
f'batch size: {args.eval_batch_size}, '
|
||||
f'batches/epoch: {len(eval_dataloader)}')
|
||||
|
||||
# Wrap policy.
|
||||
my_auto_wrap_policy = functools.partial(
|
||||
size_based_auto_wrap_policy, min_num_params=100)
|
||||
torch.cuda.set_device(gpu)
|
||||
|
||||
# Create model.
|
||||
model = resnet50(weights=None)
|
||||
model.to(args.device)
|
||||
model = FSDP(model, auto_wrap_policy=my_auto_wrap_policy)
|
||||
|
||||
# Optimizer.
|
||||
optimizer = torch.optim.SGD(model.parameters(), 0.1)
|
||||
|
||||
# Main loop.
|
||||
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
|
||||
for epoch in range(1, args.epochs + 1):
|
||||
if gpu == 0:
|
||||
print(f'Running epoch {epoch}')
|
||||
train_sampler.set_epoch(epoch)
|
||||
|
||||
start = time.time()
|
||||
train(model, args.device, train_dataloader, optimizer)
|
||||
end = time.time()
|
||||
if gpu == 0:
|
||||
print(f'Training finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
start = time.time()
|
||||
evaluate(model, args.device, eval_dataloader, metric)
|
||||
end = time.time()
|
||||
if gpu == 0:
|
||||
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
if gpu == 0:
|
||||
print('Done')
|
||||
dist.destroy_process_group()
|
||||
|
||||
|
||||
def create_args():
|
||||
"""Create main args."""
|
||||
parser = argparse.ArgumentParser(
|
||||
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
|
||||
parser.add_argument(
|
||||
'--gpus',
|
||||
default=4,
|
||||
type=int,
|
||||
help='number of gpus to use')
|
||||
parser.add_argument(
|
||||
'--epochs',
|
||||
default=2,
|
||||
type=int,
|
||||
help='number of total epochs to run')
|
||||
parser.add_argument(
|
||||
'--dataloader_num_workers',
|
||||
default=2,
|
||||
type=int,
|
||||
help='number of workders for dataloader')
|
||||
parser.add_argument(
|
||||
'--train_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to training data')
|
||||
parser.add_argument(
|
||||
'--train_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for training per gpu')
|
||||
parser.add_argument(
|
||||
'--eval_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to evaluation data')
|
||||
parser.add_argument(
|
||||
'--eval_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for evaluation per gpu')
|
||||
args = parser.parse_args()
|
||||
return args
|
||||
|
||||
|
||||
def main():
|
||||
args = create_args()
|
||||
|
||||
os.environ['MASTER_ADDR'] = 'localhost'
|
||||
os.environ['MASTER_PORT'] = '8888'
|
||||
|
||||
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
|
||||
print(f'Launch job on {args.gpus} GPUs with FSDP')
|
||||
mp.spawn(worker, nprocs=args.gpus, args=(args,))
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
main()
|
||||
@@ -1,240 +0,0 @@
|
||||
"""Train resnet on multiple GPUs with DDP."""
|
||||
|
||||
import argparse
|
||||
import functools
|
||||
import itertools
|
||||
import math
|
||||
import os
|
||||
import time
|
||||
|
||||
import torch
|
||||
from torch import nn
|
||||
import torch.distributed as dist
|
||||
from torch.distributed.fsdp import FullyShardedDataParallel as FSDP
|
||||
from torch.distributed.fsdp.wrap import size_based_auto_wrap_policy
|
||||
import torch.multiprocessing as mp
|
||||
import torchmetrics
|
||||
from torchvision.models import resnet50
|
||||
from torchvision.transforms import transforms
|
||||
import webdataset as wds
|
||||
|
||||
|
||||
def wds_split(src, rank, world_size):
|
||||
"""Shards split function for webdataset."""
|
||||
# The context of caller of this function is within multiple processes
|
||||
# (by DDP world_size) and multiple workers (by dataloader_num_workers).
|
||||
# So we totally have (world_size * num_workers) workers for processing data.
|
||||
# NOTE: Raw data should be sharded to enough shards to make sure one process
|
||||
# can handle at least one shard, otherwise the process may hang.
|
||||
worker_id = 0
|
||||
num_workers = 1
|
||||
worker_info = torch.utils.data.get_worker_info()
|
||||
if worker_info:
|
||||
worker_id = worker_info.id
|
||||
num_workers = worker_info.num_workers
|
||||
for s in itertools.islice(src, rank * num_workers + worker_id, None,
|
||||
world_size * num_workers):
|
||||
yield s
|
||||
|
||||
|
||||
def identity(x):
|
||||
return x
|
||||
|
||||
|
||||
def create_wds_dataloader(rank, args, mode):
|
||||
"""Create webdataset dataset and dataloader."""
|
||||
if mode == 'train':
|
||||
transform = transforms.Compose([
|
||||
transforms.RandomResizedCrop(224),
|
||||
transforms.RandomHorizontalFlip(),
|
||||
transforms.ToTensor(),
|
||||
transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
])
|
||||
data_path = args.train_data_path
|
||||
data_size = args.train_data_size
|
||||
batch_size_local = args.train_batch_size
|
||||
batch_size_global = args.train_batch_size * args.gpus
|
||||
# Since webdataset disallows partial batch, we pad the last batch for train.
|
||||
batches = int(math.ceil(data_size / batch_size_global))
|
||||
else:
|
||||
transform = transforms.Compose([
|
||||
transforms.Resize(256),
|
||||
transforms.CenterCrop(224),
|
||||
transforms.ToTensor(),
|
||||
transforms.Normalize(
|
||||
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
|
||||
])
|
||||
data_path = args.eval_data_path
|
||||
data_size = args.eval_data_size
|
||||
batch_size_local = args.eval_batch_size
|
||||
batch_size_global = args.eval_batch_size * args.gpus
|
||||
# Since webdataset disallows partial batch, we drop the last batch for eval.
|
||||
batches = int(data_size / batch_size_global)
|
||||
|
||||
dataset = wds.DataPipeline(
|
||||
wds.SimpleShardList(data_path),
|
||||
functools.partial(wds_split, rank=rank, world_size=args.gpus),
|
||||
wds.tarfile_to_samples(),
|
||||
wds.decode('pil'),
|
||||
wds.to_tuple('jpg;png;jpeg cls'),
|
||||
wds.map_tuple(transform, identity),
|
||||
wds.batched(batch_size_local, partial=False),
|
||||
)
|
||||
num_workers = args.dataloader_num_workers
|
||||
dataloader = wds.WebLoader(
|
||||
dataset=dataset,
|
||||
batch_size=None,
|
||||
shuffle=False,
|
||||
num_workers=num_workers,
|
||||
persistent_workers=True if num_workers > 0 else False,
|
||||
pin_memory=True).repeat(nbatches=batches)
|
||||
print(f'{mode} dataloader | samples: {data_size}, '
|
||||
f'num_workers: {num_workers}, '
|
||||
f'local batch size: {batch_size_local}, '
|
||||
f'global batch size: {batch_size_global}, '
|
||||
f'batches: {batches}')
|
||||
return dataloader
|
||||
|
||||
|
||||
def train(model, device, dataloader, optimizer):
|
||||
model.train()
|
||||
for image, target in dataloader:
|
||||
image = image.to(device, non_blocking=True)
|
||||
target = target.to(device, non_blocking=True)
|
||||
pred = model(image)
|
||||
# pred.shape (N, C), target.shape (N)
|
||||
loss = nn.functional.cross_entropy(pred, target)
|
||||
optimizer.zero_grad()
|
||||
loss.backward()
|
||||
optimizer.step()
|
||||
return loss
|
||||
|
||||
|
||||
def evaluate(model, device, dataloader, metric):
|
||||
model.eval()
|
||||
with torch.no_grad():
|
||||
for image, target in dataloader:
|
||||
image = image.to(device, non_blocking=True)
|
||||
target = target.to(device, non_blocking=True)
|
||||
pred = model(image)
|
||||
metric.update(pred, target)
|
||||
accuracy = metric.compute()
|
||||
metric.reset()
|
||||
return accuracy
|
||||
|
||||
|
||||
def worker(gpu, args):
|
||||
"""Run training and evaluation."""
|
||||
# Init process group.
|
||||
print(f'Initiating process {gpu}')
|
||||
dist.init_process_group(
|
||||
backend='nccl',
|
||||
init_method='env://',
|
||||
world_size=args.gpus,
|
||||
rank=gpu)
|
||||
|
||||
# Create dataloader.
|
||||
train_dataloader = create_wds_dataloader(gpu, args, 'train')
|
||||
eval_dataloader = create_wds_dataloader(gpu, args, 'eval')
|
||||
|
||||
# Wrap policy.
|
||||
my_auto_wrap_policy = functools.partial(
|
||||
size_based_auto_wrap_policy, min_num_params=100)
|
||||
torch.cuda.set_device(gpu)
|
||||
|
||||
# Create model.
|
||||
model = resnet50(weights=None)
|
||||
model.to(args.device)
|
||||
model = FSDP(model, auto_wrap_policy=my_auto_wrap_policy)
|
||||
|
||||
# Optimizer.
|
||||
optimizer = torch.optim.SGD(model.parameters(), 0.1)
|
||||
|
||||
# Main loop.
|
||||
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
|
||||
for epoch in range(1, args.epochs + 1):
|
||||
if gpu == 0:
|
||||
print(f'Running epoch {epoch}')
|
||||
|
||||
start = time.time()
|
||||
train(model, args.device, train_dataloader, optimizer)
|
||||
end = time.time()
|
||||
if gpu == 0:
|
||||
print(f'Training finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
start = time.time()
|
||||
evaluate(model, args.device, eval_dataloader, metric)
|
||||
end = time.time()
|
||||
if gpu == 0:
|
||||
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
|
||||
|
||||
if gpu == 0:
|
||||
print('Done')
|
||||
|
||||
|
||||
def create_args():
|
||||
"""Create main args."""
|
||||
parser = argparse.ArgumentParser(
|
||||
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
|
||||
parser.add_argument(
|
||||
'--gpus',
|
||||
default=4,
|
||||
type=int,
|
||||
help='number of gpus to use')
|
||||
parser.add_argument(
|
||||
'--epochs',
|
||||
default=2,
|
||||
type=int,
|
||||
help='number of total epochs to run')
|
||||
parser.add_argument(
|
||||
'--dataloader_num_workers',
|
||||
default=2,
|
||||
type=int,
|
||||
help='number of workders for dataloader')
|
||||
parser.add_argument(
|
||||
'--train_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to training data')
|
||||
parser.add_argument(
|
||||
'--train_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for training per gpu')
|
||||
parser.add_argument(
|
||||
'--train_data_size',
|
||||
default=50000,
|
||||
type=int,
|
||||
help='data size for training')
|
||||
parser.add_argument(
|
||||
'--eval_data_path',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to evaluation data')
|
||||
parser.add_argument(
|
||||
'--eval_batch_size',
|
||||
default=32,
|
||||
type=int,
|
||||
help='batch size for evaluation per gpu')
|
||||
parser.add_argument(
|
||||
'--eval_data_size',
|
||||
default=50000,
|
||||
type=int,
|
||||
help='data size for evaluation')
|
||||
args = parser.parse_args()
|
||||
return args
|
||||
|
||||
|
||||
def main():
|
||||
args = create_args()
|
||||
os.environ['MASTER_ADDR'] = 'localhost'
|
||||
os.environ['MASTER_PORT'] = '8888'
|
||||
|
||||
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
|
||||
print(f'Launch job on {args.gpus} GPUs with FSDP')
|
||||
mp.spawn(worker, nprocs=args.gpus, args=(args,))
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
main()
|
||||
@@ -1,98 +0,0 @@
|
||||
# Copyright 2022 Google LLC
|
||||
#
|
||||
# Licensed under the Apache License, Version 2.0 (the \"License\");
|
||||
# you may not use this file except in compliance with the License.\n",
|
||||
# You may obtain a copy of the License at
|
||||
#
|
||||
# http://www.apache.org/licenses/LICENSE-2.0
|
||||
#
|
||||
# Unless required by applicable law or agreed to in writing, software
|
||||
# distributed under the License is distributed on an \"AS IS\" BASIS,
|
||||
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
r"""Main function to shard ImageNet dataset.
|
||||
|
||||
Example usage:
|
||||
python3 -u shard_imagenet.py \
|
||||
--image_list_file=/home/jupyter/data/imagenet/train_list.txt \
|
||||
--output_pattern=/home/jupyter/data/imagenet/validation-%06d.tar
|
||||
"""
|
||||
|
||||
import argparse
|
||||
import os
|
||||
import random
|
||||
import webdataset as wds # version: 0.2.26
|
||||
|
||||
|
||||
# NOTE: only supports writing to local path,
|
||||
# need gcsfuse mounting if want to write to gcs bucket.
|
||||
def write_shards(args):
|
||||
"""Shard individual data files."""
|
||||
output_dir = os.path.dirname(args.output_pattern)
|
||||
if not os.path.isdir(output_dir):
|
||||
os.makedirs(output_dir)
|
||||
|
||||
items = []
|
||||
# Image list file is a text file, each line is a pair (image_path, label).
|
||||
with open(args.image_list_file, 'r') as f:
|
||||
for line in f:
|
||||
item = line.strip().split(' ')
|
||||
items.append((item[0], int(item[1])))
|
||||
# Shuffle items to avoid any large sequences of a single class
|
||||
# in the dataset.
|
||||
random.shuffle(items)
|
||||
|
||||
def _read_image(image_path):
|
||||
with open(image_path, 'rb') as f:
|
||||
return f.read()
|
||||
|
||||
with wds.ShardWriter(pattern=args.output_pattern,
|
||||
maxcount=args.max_images_per_shard,
|
||||
maxsize=args.max_bytes_per_shard) as sink:
|
||||
for i, (image_path, target) in enumerate(items):
|
||||
key = str(i)
|
||||
image = _read_image(image_path)
|
||||
sample = {'__key__': key, 'jpg': image, 'cls': target}
|
||||
sink.write(sample)
|
||||
if len(items) != sink.total:
|
||||
raise ValueError('Items read {} != items written {}'.format(
|
||||
len(items), sink.total))
|
||||
|
||||
|
||||
def create_args():
|
||||
"""Creates arg parser."""
|
||||
parser = argparse.ArgumentParser(
|
||||
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
|
||||
parser.add_argument(
|
||||
'--image_list_file',
|
||||
default='',
|
||||
type=str,
|
||||
help='path to image list file')
|
||||
parser.add_argument(
|
||||
'--output_pattern',
|
||||
default='',
|
||||
type=str,
|
||||
help='the pattern for output shards, like /path/to/train-%06d.tar')
|
||||
parser.add_argument(
|
||||
'--max_images_per_shard',
|
||||
default=10 * 1024,
|
||||
type=int,
|
||||
help='max number of images per shard')
|
||||
parser.add_argument(
|
||||
'--max_bytes_per_shard',
|
||||
default=300 * 1024 * 1024,
|
||||
type=int,
|
||||
help='max bytes per shard')
|
||||
args = parser.parse_args()
|
||||
return args
|
||||
|
||||
|
||||
def main():
|
||||
args = create_args()
|
||||
write_shards(args)
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
main()
|
||||
+1
-1
@@ -1,3 +1,3 @@
|
||||
torch==1.13.1
|
||||
torch==1.8.1
|
||||
torchvision==0.9.1
|
||||
tensorboard==2.5.0
|
||||
+1
-1
@@ -1,3 +1,3 @@
|
||||
torch==1.13.1
|
||||
torch==1.8.1
|
||||
torchvision==0.9.1
|
||||
tensorboard==2.5.0
|
||||
+11
-1
@@ -31,7 +31,17 @@
|
||||
"source": [
|
||||
"# Deploying a PyTorch Text Classification Model on [Vertex AI](https://cloud.google.com/vertex-ai)\n",
|
||||
"\n",
|
||||
"**Kindly reach out to Vertex AI before you run any scale tests or you have any questions.**\n"
|
||||
"**This is an Experimental release**, covered by the Pre-GA Offerings Terms of your Google Cloud Platform [Terms of Service](https://cloud.google.com/terms).\n",
|
||||
"\n",
|
||||
"Experiments are focused on validating a prototype and are not guaranteed to be released. They are not intended for production use or covered by any SLA, support obligation, or deprecation policy and might be subject to backward-incompatible changes.\n",
|
||||
"\n",
|
||||
"**Kindly drop us a note before you run any scale tests.**\n",
|
||||
"\n",
|
||||
"**Do not hesitate to contact vertexai-prediction-preview-feedback@google.com if you have any questions or run into any issues.**\n",
|
||||
"\n",
|
||||
"The usage of the product is free during the Experimental release period: you will still incur charges for other GCP products usage, such as storage.\n",
|
||||
"\n",
|
||||
"The projects need to be added to the allowlist in order to deploy PyTorch models using Vertex AI Prediction pre-built PyTorch images. If you are interested in the feature, please send an email to vertexai-prediction-preview-feedback@google.com to provide your project numbers OR project ids."
|
||||
]
|
||||
},
|
||||
{
|
||||
|
||||
@@ -1,4 +0,0 @@
|
||||
[MASTER]
|
||||
|
||||
generated-members=get_concrete_function,cv2.*
|
||||
ignored-modules=tensorflow,google.cloud
|
||||
-74
@@ -1,74 +0,0 @@
|
||||
# Dockerfile for Diffuser Serving.
|
||||
#
|
||||
# To build:
|
||||
# docker build -f model_oss/diffusers/dockerfile/serve.Dockerfile . -t ${YOUR_IMAGE_TAG}
|
||||
#
|
||||
# To push to gcr:
|
||||
# docker tag ${YOUR_IMAGE_TAG} gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
# docker push gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
|
||||
FROM pytorch/torchserve:0.7.0-gpu
|
||||
|
||||
USER root
|
||||
|
||||
ENV infer_port=7080
|
||||
ENV mng_port=7081
|
||||
ENV model_name="diffusers_serving"
|
||||
ENV PATH="/home/model-server/:${PATH}"
|
||||
|
||||
# Install libraries.
|
||||
ENV PIP_ROOT_USER_ACTION=ignore
|
||||
RUN python3 -m pip install --upgrade pip
|
||||
RUN pip install torch==1.13.1
|
||||
RUN pip install torchvision==0.14.1
|
||||
RUN pip install transformers==4.27.4
|
||||
RUN pip install datasets==2.9.0
|
||||
RUN pip install accelerate==0.17.0
|
||||
RUN pip install triton==2.0.0.dev20221120
|
||||
RUN pip install xformers==0.0.16
|
||||
RUN pip install google-cloud-storage==2.7.0
|
||||
RUN pip install imageio[ffmpeg]==2.31.0
|
||||
RUN pip install absl-py==1.4.0
|
||||
|
||||
# Copy LICENSE file
|
||||
RUN apt-get update && apt-get install wget
|
||||
RUN wget https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/LICENSE
|
||||
|
||||
# Install diffusers from main branch source code with a pinned commit.
|
||||
RUN git clone --depth 1 --branch v0.18.1 https://github.com/huggingface/diffusers.git
|
||||
WORKDIR diffusers
|
||||
RUN pip install -e .
|
||||
|
||||
# Copy model artifacts.
|
||||
COPY model_oss/diffusers/handler.py /home/model-server/handler.py
|
||||
COPY model_oss/util/ /home/model-server/util/
|
||||
ENV PYTHONPATH /home/model-server/
|
||||
|
||||
# Create torchserve configuration file.
|
||||
RUN echo \
|
||||
"default_response_timeout=1800\n" \
|
||||
"service_envelope=json\n" \
|
||||
"inference_address=http://0.0.0.0:${infer_port}\n" \
|
||||
"management_address=http://0.0.0.0:${mng_port}" >> /home/model-server/config.properties
|
||||
|
||||
# Expose ports.
|
||||
EXPOSE ${infer_port}
|
||||
EXPOSE ${mng_port}
|
||||
|
||||
# Archive model artifacts and dependencies.
|
||||
# Do not set --model-file and --serialized-file because model and checkpoint
|
||||
# will be dynamically loaded in handler.py.
|
||||
RUN torch-model-archiver \
|
||||
--model-name=${model_name} \
|
||||
--version=1.0 \
|
||||
--handler=/home/model-server/handler.py \
|
||||
--runtime=python3 \
|
||||
--export-path=/home/model-server/model-store \
|
||||
--archive-format=default \
|
||||
--force
|
||||
|
||||
# Run Torchserve HTTP serve to respond to prediction requests.
|
||||
CMD ["torchserve", "--start", \
|
||||
"--ts-config", "/home/model-server/config.properties", \
|
||||
"--models", "${model_name}=${model_name}.mar", \
|
||||
"--model-store", "/home/model-server/model-store"]
|
||||
-47
@@ -1,47 +0,0 @@
|
||||
# Dockerfile for Diffuser Training.
|
||||
#
|
||||
# To build:
|
||||
# docker build -f model_oss/diffusers/dockerfile/train.Dockerfile . -t ${YOUR_IMAGE_TAG}
|
||||
#
|
||||
# To push to gcr:
|
||||
# docker tag ${YOUR_IMAGE_TAG} gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
# docker push gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
|
||||
# Base on pytorch-cuda image.
|
||||
FROM pytorch/pytorch:1.13.0-cuda11.6-cudnn8-runtime
|
||||
|
||||
# Install tools.
|
||||
RUN apt-get update && apt-get install -y --no-install-recommends \
|
||||
curl \
|
||||
wget \
|
||||
git \
|
||||
vim
|
||||
|
||||
# Copy license.
|
||||
RUN wget https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/LICENSE
|
||||
|
||||
# Install libraries.
|
||||
RUN pip install torchvision==0.14.1
|
||||
RUN pip install transformers==4.26.1
|
||||
RUN pip install datasets==2.9.0
|
||||
RUN pip install accelerate==0.17.0
|
||||
RUN pip install triton==2.0.0.dev20221120
|
||||
RUN pip install xformers==0.0.16
|
||||
RUN pip install Jinja2==3.1.2
|
||||
RUN pip install ftfy==6.1.1
|
||||
RUN pip install cloudml-hypertune==0.1.0.dev6
|
||||
RUN pip install tensorboard==2.12.0
|
||||
|
||||
# Install diffusers from main branch source code with a pinned commit.
|
||||
RUN git clone --depth 1 --branch v0.18.1 https://github.com/huggingface/diffusers.git
|
||||
WORKDIR diffusers
|
||||
RUN pip install -e .
|
||||
|
||||
# Switch to diffusers examples folder.
|
||||
WORKDIR examples
|
||||
|
||||
# Config accelerate.
|
||||
COPY model_oss/diffusers/train.sh train.sh
|
||||
|
||||
# Generate accelerate config at the beginning of docker run.
|
||||
ENTRYPOINT ["/bin/bash", "train.sh"]
|
||||
@@ -1,256 +0,0 @@
|
||||
"""Custom handler for huggingface/diffusers models."""
|
||||
|
||||
# pylint: disable=g-importing-member
|
||||
# pylint: disable=logging-fstring-interpolation
|
||||
|
||||
import base64
|
||||
import io
|
||||
import logging
|
||||
import os
|
||||
from typing import Any, List, Sequence, Tuple
|
||||
|
||||
from diffusers import ControlNetModel
|
||||
from diffusers import DiffusionPipeline
|
||||
from diffusers import DPMSolverMultistepScheduler
|
||||
from diffusers import EulerAncestralDiscreteScheduler
|
||||
from diffusers import StableDiffusionControlNetPipeline
|
||||
from diffusers import StableDiffusionImg2ImgPipeline
|
||||
from diffusers import StableDiffusionInpaintPipeline
|
||||
from diffusers import StableDiffusionInstructPix2PixPipeline
|
||||
from diffusers import StableDiffusionPipeline
|
||||
from diffusers import StableDiffusionUpscalePipeline
|
||||
from diffusers import TextToVideoZeroPipeline
|
||||
from diffusers import UniPCMultistepScheduler
|
||||
import imageio
|
||||
import numpy as np
|
||||
from PIL import Image
|
||||
import torch
|
||||
from ts.torch_handler.base_handler import BaseHandler
|
||||
|
||||
from util import constants
|
||||
from util import fileutils
|
||||
from util import image_format_converter
|
||||
from video_util import video_format_converter
|
||||
|
||||
STABLE_DIFFUSION_MODEL = "runwayml/stable-diffusion-v1-5"
|
||||
|
||||
# Tasks
|
||||
TEXT_TO_IMAGE = "text-to-image"
|
||||
IMAGE_TO_IMAGE = "image-to-image"
|
||||
IMAGE_INPAINTING = "image-inpainting"
|
||||
INSTRUCT_PIX2PIX = "instruct-pix2pix"
|
||||
CONTROLNET = "controlnet"
|
||||
CONDITIONED_SUPER_RES = "conditioned-super-res"
|
||||
TEXT_TO_VIDEO_ZERO_SHOT = "text-to-video-zero-shot"
|
||||
TEXT_TO_VIDEO = "text-to-video"
|
||||
|
||||
|
||||
def frames_to_video_bytes(frames: Sequence[np.ndarray], fps: int) -> bytes:
|
||||
images = [Image.fromarray(array) for array in frames]
|
||||
io_obj = io.BytesIO()
|
||||
imageio.mimsave(io_obj, images, format=".mp4", fps=fps)
|
||||
return io_obj.getvalue()
|
||||
|
||||
|
||||
class DiffusersHandler(BaseHandler):
|
||||
"""Custom handler for TIMM models."""
|
||||
|
||||
def initialize(self, context: Any):
|
||||
"""Custom initialize."""
|
||||
|
||||
properties = context.system_properties
|
||||
self.map_location = (
|
||||
"cuda"
|
||||
if torch.cuda.is_available() and properties.get("gpu_id") is not None
|
||||
else "cpu"
|
||||
)
|
||||
self.device = torch.device(
|
||||
self.map_location + ":" + str(properties.get("gpu_id"))
|
||||
if torch.cuda.is_available() and properties.get("gpu_id") is not None
|
||||
else self.map_location
|
||||
)
|
||||
self.manifest = context.manifest
|
||||
|
||||
self.model_id = os.environ["MODEL_ID"]
|
||||
if self.model_id.startswith(constants.GCS_URI_PREFIX):
|
||||
gcs_path = self.model_id[len(constants.GCS_URI_PREFIX) :]
|
||||
local_model_dir = os.path.join(constants.LOCAL_MODEL_DIR, gcs_path)
|
||||
logging.info(f"Download {self.model_id} to {local_model_dir}")
|
||||
fileutils.download_gcs_dir_to_local(self.model_id, local_model_dir)
|
||||
self.model_id = local_model_dir
|
||||
|
||||
self.task = os.environ.get("TASK", TEXT_TO_IMAGE)
|
||||
logging.info(f"Using task:{self.task}, model:{self.model_id}")
|
||||
|
||||
if self.task == TEXT_TO_IMAGE:
|
||||
pipeline = StableDiffusionPipeline.from_pretrained(
|
||||
self.model_id, torch_dtype=torch.float16
|
||||
)
|
||||
pipeline.scheduler = EulerAncestralDiscreteScheduler.from_config(
|
||||
pipeline.scheduler.config
|
||||
)
|
||||
pipeline = pipeline.to(self.map_location)
|
||||
# Reduce memory footprint.
|
||||
pipeline.enable_attention_slicing()
|
||||
elif self.task == IMAGE_TO_IMAGE:
|
||||
pipeline = StableDiffusionImg2ImgPipeline.from_pretrained(
|
||||
self.model_id, torch_dtype=torch.float16
|
||||
)
|
||||
pipeline.scheduler = EulerAncestralDiscreteScheduler.from_config(
|
||||
pipeline.scheduler.config
|
||||
)
|
||||
pipeline = pipeline.to(self.map_location)
|
||||
# Reduce memory footprint.
|
||||
pipeline.enable_attention_slicing()
|
||||
elif self.task == IMAGE_INPAINTING:
|
||||
pipeline = StableDiffusionInpaintPipeline.from_pretrained(
|
||||
self.model_id, torch_dtype=torch.float16
|
||||
)
|
||||
pipeline.scheduler = EulerAncestralDiscreteScheduler.from_config(
|
||||
pipeline.scheduler.config
|
||||
)
|
||||
pipeline = pipeline.to(self.map_location)
|
||||
# Reduce memory footprint.
|
||||
pipeline.enable_attention_slicing()
|
||||
elif self.task == INSTRUCT_PIX2PIX:
|
||||
pipeline = StableDiffusionInstructPix2PixPipeline.from_pretrained(
|
||||
self.model_id, torch_dtype=torch.float16
|
||||
)
|
||||
pipeline.scheduler = EulerAncestralDiscreteScheduler.from_config(
|
||||
pipeline.scheduler.config
|
||||
)
|
||||
pipeline = pipeline.to(self.map_location)
|
||||
# Reduce memory footprint.
|
||||
pipeline.enable_attention_slicing()
|
||||
elif self.task == CONTROLNET:
|
||||
controlnet = ControlNetModel.from_pretrained(
|
||||
self.model_id, torch_dtype=torch.float16
|
||||
)
|
||||
pipeline = StableDiffusionControlNetPipeline.from_pretrained(
|
||||
STABLE_DIFFUSION_MODEL,
|
||||
controlnet=controlnet,
|
||||
torch_dtype=torch.float16,
|
||||
)
|
||||
pipeline.scheduler = UniPCMultistepScheduler.from_config(
|
||||
pipeline.scheduler.config
|
||||
)
|
||||
pipeline.enable_xformers_memory_efficient_attention()
|
||||
pipeline.enable_model_cpu_offload()
|
||||
pipeline = pipeline.to(self.map_location)
|
||||
# Reduce memory footprint.
|
||||
pipeline.enable_attention_slicing()
|
||||
elif self.task == CONDITIONED_SUPER_RES:
|
||||
pipeline = StableDiffusionUpscalePipeline.from_pretrained(
|
||||
self.model_id, torch_dtype=torch.float16
|
||||
)
|
||||
pipeline.scheduler = EulerAncestralDiscreteScheduler.from_config(
|
||||
pipeline.scheduler.config
|
||||
)
|
||||
# This is necessary to 4x upscale >=256x256 input images with V100.
|
||||
logging.info("Enable xformers memory efficient attention for inference.")
|
||||
pipeline.enable_xformers_memory_efficient_attention()
|
||||
pipeline = pipeline.to(self.map_location)
|
||||
# Reduce memory footprint.
|
||||
pipeline.enable_attention_slicing()
|
||||
elif self.task == TEXT_TO_VIDEO_ZERO_SHOT:
|
||||
pipeline = TextToVideoZeroPipeline.from_pretrained(
|
||||
STABLE_DIFFUSION_MODEL, torch_dtype=torch.float16
|
||||
)
|
||||
# Memory optimization.
|
||||
pipeline.enable_xformers_memory_efficient_attention()
|
||||
pipeline.enable_model_cpu_offload()
|
||||
pipeline = pipeline.to(self.map_location)
|
||||
elif self.task == TEXT_TO_VIDEO:
|
||||
pipeline = DiffusionPipeline.from_pretrained(
|
||||
self.model_id, torch_dtype=torch.float16, variant="fp16"
|
||||
)
|
||||
pipeline.enable_model_cpu_offload()
|
||||
# Memory optimization.
|
||||
pipeline.enable_vae_slicing()
|
||||
pipeline.scheduler = DPMSolverMultistepScheduler.from_config(
|
||||
pipeline.scheduler.config
|
||||
)
|
||||
else:
|
||||
raise ValueError(f"Invalid TASK: {self.task}")
|
||||
|
||||
self.pipeline = pipeline
|
||||
self.initialized = True
|
||||
logging.info("Handler initialization done.")
|
||||
|
||||
def preprocess(self, data: Any) -> Tuple[Any, Any, Any]:
|
||||
"""Preprocess input data."""
|
||||
prompts = [item["prompt"] for item in data]
|
||||
images = None
|
||||
mask_images = None
|
||||
|
||||
if "image" in data[0]:
|
||||
images = [
|
||||
image_format_converter.base64_to_image(item["image"]) for item in data
|
||||
]
|
||||
if "mask_image" in data[0]:
|
||||
mask_images = [
|
||||
image_format_converter.base64_to_image(item["mask_image"])
|
||||
for item in data
|
||||
]
|
||||
return prompts, images, mask_images
|
||||
|
||||
def inference(self, data: Any, *args, **kwargs) -> List[Image.Image]:
|
||||
"""Run the inference."""
|
||||
prompts, images, mask_images = data
|
||||
if self.task == TEXT_TO_IMAGE:
|
||||
predicted_images = self.pipeline(prompt=prompts).images
|
||||
elif self.task == IMAGE_TO_IMAGE:
|
||||
predicted_images = self.pipeline(prompt=prompts, image=images).images
|
||||
elif self.task == IMAGE_INPAINTING:
|
||||
predicted_images = self.pipeline(
|
||||
prompt=prompts, image=images, mask_image=mask_images
|
||||
).images
|
||||
elif self.task == INSTRUCT_PIX2PIX:
|
||||
predicted_images = self.pipeline(prompt=prompts, image=images).images
|
||||
elif self.task == CONTROLNET:
|
||||
predicted_images = self.pipeline(
|
||||
prompt=prompts, image=images, num_inference_steps=20
|
||||
).images
|
||||
elif self.task == CONDITIONED_SUPER_RES:
|
||||
predicted_images = self.pipeline(
|
||||
prompt=prompts, image=images, num_inference_steps=20
|
||||
).images
|
||||
elif self.task == TEXT_TO_VIDEO_ZERO_SHOT:
|
||||
# For each given prompt, generate a short video.
|
||||
# The pipeline doesn't support multiple prompts in one run yet.
|
||||
videos = []
|
||||
for prompt in prompts:
|
||||
numpy_arrays = self.pipeline(prompt=prompt).images
|
||||
numpy_arrays = [(i * 255).astype("uint8") for i in numpy_arrays]
|
||||
videos.append(
|
||||
frames_to_video_bytes(numpy_arrays, fps=4)
|
||||
)
|
||||
return videos
|
||||
elif self.task == TEXT_TO_VIDEO:
|
||||
predicted_images = np.asarray(self.pipeline(prompt=prompts).frames)
|
||||
# For multiple prompts, the model concatenates video frames, i.e. the
|
||||
# output shape is (num_frames, height, width * len(prompts), channels).
|
||||
# Therefore we need to split the output into different videos.
|
||||
predicted_images = np.array_split(predicted_images, len(prompts), axis=2)
|
||||
videos = [
|
||||
frames_to_video_bytes(images, fps=8)
|
||||
for images in predicted_images
|
||||
]
|
||||
return videos
|
||||
else:
|
||||
raise ValueError(f"Invalid TASK: {self.task}")
|
||||
return predicted_images
|
||||
|
||||
def postprocess(self, data: Any) -> List[str]:
|
||||
"""Convert the images to base64 string."""
|
||||
outputs = []
|
||||
for prediction in data:
|
||||
if isinstance(prediction, bytes):
|
||||
# This is the video bytes.
|
||||
outputs.append(base64.b64encode(prediction).decode("utf-8"))
|
||||
else:
|
||||
outputs.append(image_format_converter.image_to_base64(prediction))
|
||||
return outputs
|
||||
|
||||
|
||||
# pylint: enable=logging-fstring-interpolation
|
||||
@@ -1,6 +0,0 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Setup accelerate config before running trainer.
|
||||
python -c "from accelerate.utils import write_basic_config; write_basic_config(mixed_precision='fp16')"
|
||||
|
||||
accelerate launch "$@"
|
||||
-118
@@ -1,118 +0,0 @@
|
||||
# Dockerfile for basic serving dockers with Keras.
|
||||
#
|
||||
# To build:
|
||||
# docker build -f model_oss/keras/dockerfile/serve.Dockerfile . -t ${YOUR_IMAGE_TAG}
|
||||
#
|
||||
# To push to gcr:
|
||||
# docker tag ${YOUR_IMAGE_TAG} gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
# docker push gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
|
||||
FROM tensorflow/tensorflow:2.12.0-gpu
|
||||
|
||||
ENV DEBIAN_FRONTEND=noninteractive
|
||||
|
||||
# This is added to fix docker build error related to Nvidia key update.
|
||||
RUN rm -f /etc/apt/sources.list.d/cuda.list
|
||||
RUN curl https://packages.cloud.google.com/apt/doc/apt-key.gpg | apt-key add -
|
||||
|
||||
# Install basic libs.
|
||||
RUN apt-get update && apt-get install -y --no-install-recommends \
|
||||
cmake \
|
||||
curl \
|
||||
wget \
|
||||
sudo \
|
||||
gnupg \
|
||||
libsm6 \
|
||||
libxext6 \
|
||||
libxrender-dev \
|
||||
lsb-release \
|
||||
ca-certificates \
|
||||
build-essential \
|
||||
git \
|
||||
vim \
|
||||
screen \
|
||||
libtcmalloc-minimal4
|
||||
|
||||
|
||||
# Install google cloud SDK.
|
||||
RUN wget -q https://dl.google.com/dl/cloudsdk/channels/rapid/downloads/google-cloud-sdk-359.0.0-linux-x86_64.tar.gz
|
||||
RUN tar xzf google-cloud-sdk-359.0.0-linux-x86_64.tar.gz
|
||||
RUN ./google-cloud-sdk/install.sh -q
|
||||
# Make sure gsutil will use the default service account.
|
||||
RUN echo '[GoogleCompute]\nservice_account = default' > /etc/boto.cfg
|
||||
|
||||
|
||||
# Install required libs.
|
||||
RUN pip install --upgrade pip
|
||||
RUN pip install cloud-tpu-client==0.10
|
||||
RUN pip install pyyaml==5.4.1
|
||||
RUN pip install fsspec==2021.10.1
|
||||
RUN pip install gcsfs==2021.10.1
|
||||
RUN pip install tensorflow-text==2.11.0
|
||||
RUN pip install pyglove==0.1.0
|
||||
RUN pip install cloudml-hypertune==0.1.0.dev6
|
||||
RUN pip install pylint==2.17.2
|
||||
RUN pip install keras-cv==0.4.0
|
||||
RUN pip install tensorflow-datasets==4.8.3
|
||||
RUN pip install protobuf==3.20.3
|
||||
RUN pip install Pillow==9.5.0
|
||||
RUN pip install flask==2.3.2
|
||||
RUN pip install waitress==2.1.2
|
||||
|
||||
# Installs Reduction Server NCCL plugin.
|
||||
RUN echo "deb https://packages.cloud.google.com/apt google-fast-socket main" | tee /etc/apt/sources.list.d/google-fast-socket.list \
|
||||
&& curl -s -L https://packages.cloud.google.com/apt/doc/apt-key.gpg | apt-key add - \
|
||||
&& apt update && apt install -y google-reduction-server
|
||||
|
||||
# Downloading gcloud package
|
||||
RUN curl https://dl.google.com/dl/cloudsdk/release/google-cloud-sdk.tar.gz > /tmp/google-cloud-sdk.tar.gz
|
||||
|
||||
# Installing the package
|
||||
RUN mkdir -p /usr/local/gcloud \
|
||||
&& tar -C /usr/local/gcloud -xvf /tmp/google-cloud-sdk.tar.gz \
|
||||
&& /usr/local/gcloud/google-cloud-sdk/install.sh
|
||||
|
||||
RUN wget https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/LICENSE
|
||||
|
||||
# Adding the package path to local
|
||||
ENV PATH $PATH:/usr/local/gcloud/google-cloud-sdk/bin
|
||||
|
||||
|
||||
ENV PROTOCOL_BUFFERS_PYTHON_IMPLEMENTATION=cpp
|
||||
|
||||
# Lower the memory fragmentation, and speed up the training.
|
||||
# https://github.com/tensorflow/tensorflow/issues/44176#issuecomment-783768033
|
||||
ENV LD_PRELOAD=/usr/lib/x86_64-linux-gnu/libtcmalloc_minimal.so.4
|
||||
|
||||
# Enable userspace DNS cache
|
||||
ENV GCS_RESOLVE_REFRESH_SECS=60
|
||||
ENV GCS_REQUEST_CONNECTION_TIMEOUT_SECS=300
|
||||
ENV GCS_METADATA_REQUEST_TIMEOUT_SECS=300
|
||||
ENV GCS_READ_REQUEST_TIMEOUT_SECS=300
|
||||
ENV GCS_WRITE_REQUEST_TIMEOUT_SECS=600
|
||||
# Each opened GCS file takes GCS_READ_CACHE_BLOCK_SIZE_MB of RAM, reduce the
|
||||
# value from the default 64MB to 8MB to decrease memory footprint.
|
||||
ENV GCS_READ_CACHE_BLOCK_SIZE_MB=8
|
||||
|
||||
EXPOSE 8501
|
||||
|
||||
WORKDIR /usr/local/lib/python3.8/dist-packages/official/vision
|
||||
|
||||
COPY model_oss/keras /automl_vision/keras
|
||||
COPY model_oss/util /automl_vision/util
|
||||
|
||||
WORKDIR /automl_vision
|
||||
|
||||
ENV PYTHONPATH "${PYTHONPATH}:/automl_vision/util"
|
||||
ENV MODEL_PATH ""
|
||||
ENV IMAGE_WIDTH "512"
|
||||
ENV IMAGE_HEIGHT "512"
|
||||
|
||||
COPY model_oss/keras/serve.py ./app.py
|
||||
|
||||
# Run pylint to validate code.
|
||||
COPY .pylintrc /automl_vision/.pylintrc
|
||||
RUN find . -type f -name "*.py" | xargs pylint --rcfile=./.pylintrc --errors-only
|
||||
|
||||
ENTRYPOINT ["flask","run"]
|
||||
CMD ["--host=0.0.0.0", "--port=8501"]
|
||||
-111
@@ -1,111 +0,0 @@
|
||||
# Dockerfile for basic training dockers with Keras.
|
||||
#
|
||||
# To build:
|
||||
# docker build -f model_oss/keras/dockerfile/train.Dockerfile . -t ${YOUR_IMAGE_TAG}
|
||||
#
|
||||
# To push to gcr:
|
||||
# docker tag ${YOUR_IMAGE_TAG} gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
# docker push gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
|
||||
FROM tensorflow/tensorflow:2.12.0-gpu
|
||||
|
||||
ENV DEBIAN_FRONTEND=noninteractive
|
||||
|
||||
# This is added to fix docker build error related to Nvidia key update.
|
||||
RUN rm -f /etc/apt/sources.list.d/cuda.list
|
||||
RUN curl https://packages.cloud.google.com/apt/doc/apt-key.gpg | apt-key add -
|
||||
|
||||
# Install basic libs.
|
||||
RUN apt-get update && apt-get install -y --no-install-recommends \
|
||||
cmake \
|
||||
curl \
|
||||
wget \
|
||||
sudo \
|
||||
gnupg \
|
||||
libsm6 \
|
||||
libxext6 \
|
||||
libxrender-dev \
|
||||
lsb-release \
|
||||
ca-certificates \
|
||||
build-essential \
|
||||
git \
|
||||
vim \
|
||||
screen \
|
||||
libtcmalloc-minimal4
|
||||
|
||||
|
||||
# Install google cloud SDK.
|
||||
RUN wget -q https://dl.google.com/dl/cloudsdk/channels/rapid/downloads/google-cloud-sdk-359.0.0-linux-x86_64.tar.gz
|
||||
RUN tar xzf google-cloud-sdk-359.0.0-linux-x86_64.tar.gz
|
||||
RUN ./google-cloud-sdk/install.sh -q
|
||||
# Make sure gsutil will use the default service account.
|
||||
RUN echo '[GoogleCompute]\nservice_account = default' > /etc/boto.cfg
|
||||
|
||||
|
||||
# Install required libs.
|
||||
RUN pip install --upgrade pip
|
||||
RUN pip install cloud-tpu-client==0.10
|
||||
RUN pip install pyyaml==5.4.1
|
||||
RUN pip install fsspec==2021.10.1
|
||||
RUN pip install gcsfs==2021.10.1
|
||||
RUN pip install tensorflow-text==2.11.0
|
||||
RUN pip install pyglove==0.1.0
|
||||
RUN pip install cloudml-hypertune==0.1.0.dev6
|
||||
RUN pip install pylint==2.17.2
|
||||
RUN pip install keras-cv==0.4.0
|
||||
RUN pip install tensorflow-datasets==4.8.3
|
||||
RUN pip install tensorflow-estimator==2.12.0
|
||||
RUN pip install tensorflow-gcs-config==2.12.0
|
||||
RUN pip install tensorflow-hub==0.13.0
|
||||
RUN pip install tensorflow-io-gcs-filesystem==0.32.0
|
||||
RUN pip install tensorflow-metadata==1.13.1
|
||||
RUN pip install tensorflow-probability==0.19.0
|
||||
RUN pip install tensorboard==2.12.2
|
||||
RUN pip install tensorboard-data-server==0.7.0
|
||||
RUN pip install tensorboard-plugin-wit==1.8.1
|
||||
RUN pip install protobuf==3.20.3
|
||||
RUN pip install pandas==1.5.3
|
||||
RUN pip install pandas-datareader==0.10.0
|
||||
RUN pip install pandas-gbq==0.17.9
|
||||
RUN pip install pycocotools==2.0.6
|
||||
|
||||
# Installs Reduction Server NCCL plugin.
|
||||
RUN echo "deb https://packages.cloud.google.com/apt google-fast-socket main" | tee /etc/apt/sources.list.d/google-fast-socket.list \
|
||||
&& curl -s -L https://packages.cloud.google.com/apt/doc/apt-key.gpg | apt-key add - \
|
||||
&& apt update && apt install -y google-reduction-server
|
||||
|
||||
RUN wget https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/LICENSE
|
||||
|
||||
ENV PROTOCOL_BUFFERS_PYTHON_IMPLEMENTATION=cpp
|
||||
|
||||
# Lower the memory fragmentation, and speed up the training.
|
||||
# https://github.com/tensorflow/tensorflow/issues/44176#issuecomment-783768033
|
||||
ENV LD_PRELOAD=/usr/lib/x86_64-linux-gnu/libtcmalloc_minimal.so.4
|
||||
|
||||
# Enable userspace DNS cache
|
||||
ENV GCS_RESOLVE_REFRESH_SECS=60
|
||||
ENV GCS_REQUEST_CONNECTION_TIMEOUT_SECS=300
|
||||
ENV GCS_METADATA_REQUEST_TIMEOUT_SECS=300
|
||||
ENV GCS_READ_REQUEST_TIMEOUT_SECS=300
|
||||
ENV GCS_WRITE_REQUEST_TIMEOUT_SECS=600
|
||||
# Each opened GCS file takes GCS_READ_CACHE_BLOCK_SIZE_MB of RAM, reduce the
|
||||
# value from the default 64MB to 8MB to decrease memory footprint.
|
||||
ENV GCS_READ_CACHE_BLOCK_SIZE_MB=8
|
||||
|
||||
WORKDIR /usr/local/lib/python3.8/dist-packages/official/vision
|
||||
|
||||
COPY model_oss/keras /automl_vision/keras
|
||||
COPY model_oss/util /automl_vision/util
|
||||
|
||||
WORKDIR /automl_vision
|
||||
|
||||
# Keras stable diffusion training codes set width and height as RESOLUTION.
|
||||
ENV RESOLUTION "512"
|
||||
|
||||
ENV PYTHONPATH "${PYTHONPATH}:/automl_vision/util"
|
||||
|
||||
# Run pylint to validate code.
|
||||
COPY .pylintrc /automl_vision/.pylintrc
|
||||
RUN find . -type f -name "*.py" | xargs pylint --rcfile=./.pylintrc --errors-only
|
||||
|
||||
ENTRYPOINT ["python3","keras/train.py"]
|
||||
@@ -1,184 +0,0 @@
|
||||
r"""Servers Keras Stable Diffusion models.
|
||||
|
||||
python serve.py --model_path=<model path in gcs>
|
||||
|
||||
curl -d \
|
||||
'{"prompt":"Hello Kitty"}' \
|
||||
-H "Content-Type: application/json" \
|
||||
-X POST http://localhost:8501/predict
|
||||
"""
|
||||
|
||||
import base64
|
||||
import io
|
||||
import json
|
||||
import os
|
||||
from typing import List, Tuple
|
||||
|
||||
from absl import app
|
||||
# The docker builds could not find flask and waitress.
|
||||
# pylint: disable=import-error
|
||||
from flask import Flask
|
||||
from flask import request
|
||||
from flask import Response
|
||||
import keras_cv
|
||||
from PIL import Image
|
||||
from waitress import serve
|
||||
|
||||
from util import constants
|
||||
from util import fileutils
|
||||
|
||||
|
||||
flask_app = Flask(__name__)
|
||||
|
||||
stable_diffusion_model = None
|
||||
|
||||
|
||||
model_path = os.environ.get('MODEL_PATH', '')
|
||||
if model_path.startswith(constants.GCS_URI_PREFIX):
|
||||
print('Downloading models from gcs to local.')
|
||||
os.makedirs(constants.LOCAL_MODEL_DIR, exist_ok=True)
|
||||
fileutils.download_gcs_dir_to_local(
|
||||
os.path.dirname(model_path), constants.LOCAL_MODEL_DIR
|
||||
)
|
||||
model_path = os.path.join(
|
||||
constants.LOCAL_MODEL_DIR, os.path.basename(model_path)
|
||||
)
|
||||
|
||||
image_width = int(os.environ.get('IMAGE_WIDTH', 512))
|
||||
image_height = int(os.environ.get('IMAGE_HEIGHT', 512))
|
||||
|
||||
print('image_width=', image_width, 'image_height=', image_height)
|
||||
print('Create Keras stable diffusion models.')
|
||||
stable_diffusion_model = keras_cv.models.StableDiffusion(
|
||||
img_width=image_width,
|
||||
img_height=image_height,
|
||||
jit_compile=True,
|
||||
)
|
||||
|
||||
if model_path:
|
||||
# We just reload the weights of the fine-tuned diffusion model.
|
||||
print('Initialize finetuned models from: ', model_path)
|
||||
stable_diffusion_model.diffusion_model.load_weights(model_path)
|
||||
|
||||
|
||||
def error(message: str) -> str:
|
||||
"""Returns a JSON representing an error response."""
|
||||
return json.dumps({
|
||||
'success': False,
|
||||
'error': message,
|
||||
})
|
||||
|
||||
|
||||
def check_key_in_json(content: str, keys: List[str]) -> str:
|
||||
for key in keys:
|
||||
if key not in content:
|
||||
return error('No {} in request {}.'.format(key, content))
|
||||
return None
|
||||
|
||||
|
||||
def validate_json_key(json_key_string: str) -> Tuple[str, bool]:
|
||||
try:
|
||||
json_key = json.loads(json_key_string)
|
||||
except (ValueError, TypeError):
|
||||
return (error('Invalid key found in request'), False)
|
||||
return (json_key, True)
|
||||
|
||||
|
||||
# The health check route is required for docker deployment in google cloud.
|
||||
@flask_app.route('/ping')
|
||||
def ping() -> Response:
|
||||
"""Health checks."""
|
||||
return Response(status=200)
|
||||
|
||||
|
||||
# The return should be `Response` for docker deployment in google cloud.
|
||||
@flask_app.route('/predict', methods=['GET', 'POST'])
|
||||
def predict_model() -> Response:
|
||||
"""Predictions."""
|
||||
if request.method == 'POST':
|
||||
contents = request.get_json(force=True)
|
||||
|
||||
print('The input contents are:', contents)
|
||||
batch_size = 1
|
||||
num_steps = 25
|
||||
seed = 1234
|
||||
if 'parameters' in contents:
|
||||
parameters = contents['parameters']
|
||||
if 'batch_size' in parameters:
|
||||
batch_size = int(parameters['batch_size'])
|
||||
if 'num_steps' in parameters:
|
||||
num_steps = int(parameters['num_steps'])
|
||||
if 'seed' in parameters:
|
||||
seed = int(parameters['seed'])
|
||||
print('batch_size=', batch_size, 'num_steps=', num_steps, 'seed=', seed)
|
||||
if batch_size < 1:
|
||||
return Response(
|
||||
response=error('The batch size must be a positive integar.'),
|
||||
status=200,
|
||||
mimetype='text/plain',
|
||||
)
|
||||
if num_steps < 1:
|
||||
return Response(
|
||||
response=error('The num steps must be a positive integar.'),
|
||||
status=200,
|
||||
mimetype='text/plain',
|
||||
)
|
||||
predictions = []
|
||||
for content in contents['instances']:
|
||||
print('Processing:', content)
|
||||
prompt = content['prompt']
|
||||
generated_image_array = stable_diffusion_model.text_to_image(
|
||||
prompt=prompt,
|
||||
batch_size=batch_size,
|
||||
num_steps=num_steps,
|
||||
seed=seed,
|
||||
)
|
||||
|
||||
generated_image_bytes_array = []
|
||||
for i in range(batch_size):
|
||||
generated_image = Image.fromarray(generated_image_array[i])
|
||||
# Converts the image to a base64-encoded string.
|
||||
buffered_image = io.BytesIO()
|
||||
generated_image.save(buffered_image, format='JPEG')
|
||||
generated_image_bytes = base64.b64encode(
|
||||
buffered_image.getvalue()
|
||||
).decode('utf-8')
|
||||
generated_image_bytes_array.append(generated_image_bytes)
|
||||
prediction = {
|
||||
'prompt': prompt,
|
||||
'predicted_image': generated_image_bytes_array,
|
||||
}
|
||||
predictions.append(prediction)
|
||||
|
||||
return Response(
|
||||
response=json.dumps({
|
||||
'success': True,
|
||||
'predictions': predictions,
|
||||
}),
|
||||
status=200,
|
||||
mimetype='text/plain',
|
||||
)
|
||||
else:
|
||||
return Response(
|
||||
response=json.dumps({
|
||||
'success': True,
|
||||
'isalive': stable_diffusion_model is not None,
|
||||
}),
|
||||
status=200,
|
||||
mimetype='text/plain',
|
||||
)
|
||||
|
||||
|
||||
def serve_main(unused_argv):
|
||||
"""The main function to serve Keras models."""
|
||||
del unused_argv
|
||||
# This is used when running locally only. When deploying to Google App
|
||||
# Engine, a webserver process such as Gunicorn will serve the app.
|
||||
# # Debug deployment.
|
||||
# flask_app.run(host='0.0.0.0', port=8501, debug=True)
|
||||
# Prod deployment.
|
||||
serve(flask_app, host='0.0.0.0', port=8501)
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
app.run(serve_main)
|
||||
@@ -1,363 +0,0 @@
|
||||
"""Train Keras Stable Diffusion.
|
||||
|
||||
Most the codes below are from
|
||||
https://keras.io/examples/generative/finetune_stable_diffusion/.
|
||||
"""
|
||||
import os
|
||||
|
||||
from absl import app
|
||||
from absl import flags
|
||||
from absl import logging
|
||||
import keras_cv
|
||||
# pylint: disable=g-importing-member
|
||||
from keras_cv.models.stable_diffusion.clip_tokenizer import SimpleTokenizer
|
||||
from keras_cv.models.stable_diffusion.diffusion_model import DiffusionModel
|
||||
from keras_cv.models.stable_diffusion.image_encoder import ImageEncoder
|
||||
from keras_cv.models.stable_diffusion.noise_scheduler import NoiseScheduler
|
||||
from keras_cv.models.stable_diffusion.text_encoder import TextEncoder
|
||||
import numpy as np
|
||||
# The docker builds could not find pandas.
|
||||
# pylint: disable=import-error
|
||||
import pandas as pd
|
||||
import tensorflow as tf
|
||||
from tensorflow import keras
|
||||
import tensorflow.experimental.numpy as tnp
|
||||
|
||||
from util import constants
|
||||
from util import fileutils
|
||||
|
||||
_INPUT_CSV_PATH = flags.DEFINE_string(
|
||||
'input_csv_path',
|
||||
None,
|
||||
'The input csv path.',
|
||||
required=True,
|
||||
)
|
||||
|
||||
_USE_MP = flags.DEFINE_bool(
|
||||
'use_mp',
|
||||
True,
|
||||
'Enable mixed-precision training if the underlying GPU has tensor cores.',
|
||||
)
|
||||
|
||||
_EPOCHS = flags.DEFINE_integer('epochs', 1, 'The number of epochs.')
|
||||
|
||||
_OUTPUT_MODEL_DIR = flags.DEFINE_string(
|
||||
'output_model_dir',
|
||||
None,
|
||||
'The output model dir.',
|
||||
required=True,
|
||||
)
|
||||
|
||||
# These hyperparameters defaults come from this tutorial by Hugging Face:
|
||||
# https://huggingface.co/docs/diffusers/training/text2image
|
||||
_LEARNING_RATE = flags.DEFINE_float(
|
||||
'learning_rate', 1e-5, 'The learning rate parameter for AdamW optimizer.'
|
||||
)
|
||||
|
||||
_BETA_1 = flags.DEFINE_float(
|
||||
'beta_1', 0.9, 'The beta_1 parameter for AdamW optimizer.'
|
||||
)
|
||||
|
||||
_BETA_2 = flags.DEFINE_float(
|
||||
'beta_2', 0.999, 'The beta_2 parameter for AdamW optimizer.'
|
||||
)
|
||||
|
||||
_WEIGHT_DECAY = flags.DEFINE_float(
|
||||
'weight_decay', 1e-2, 'The weight decay parameter for AdamW optimizer.'
|
||||
)
|
||||
|
||||
_EPSILON = flags.DEFINE_float(
|
||||
'epsilon', 1e-08, 'The epsilon parameter for AdamW optimizer.'
|
||||
)
|
||||
|
||||
RESOLUTION = int(os.environ.get('RESOLUTION', 512))
|
||||
|
||||
# The padding token and maximum prompt length are specific to the text encoder.
|
||||
# If you're using a different text encoder be sure to change them accordingly.
|
||||
PADDING_TOKEN = 49407
|
||||
MAX_PROMPT_LENGTH = 77
|
||||
|
||||
AUTO = tf.data.AUTOTUNE
|
||||
POS_IDS = tf.convert_to_tensor([list(range(MAX_PROMPT_LENGTH))], dtype=tf.int32)
|
||||
|
||||
|
||||
augmenter = keras.Sequential(
|
||||
layers=[
|
||||
keras_cv.layers.CenterCrop(RESOLUTION, RESOLUTION),
|
||||
keras_cv.layers.RandomFlip(),
|
||||
tf.keras.layers.Rescaling(scale=1.0 / 127.5, offset=-1),
|
||||
]
|
||||
)
|
||||
text_encoder = TextEncoder(MAX_PROMPT_LENGTH)
|
||||
|
||||
|
||||
def process_image(image_path, tokenized_text):
|
||||
image = tf.io.read_file(image_path)
|
||||
image = tf.io.decode_png(image, 3)
|
||||
image = tf.image.resize(image, (RESOLUTION, RESOLUTION))
|
||||
return image, tokenized_text
|
||||
|
||||
|
||||
def apply_augmentation(image_batch, token_batch):
|
||||
return augmenter(image_batch), token_batch
|
||||
|
||||
|
||||
def run_text_encoder(image_batch, token_batch):
|
||||
return (
|
||||
image_batch,
|
||||
token_batch,
|
||||
text_encoder([token_batch, POS_IDS], training=False),
|
||||
)
|
||||
|
||||
|
||||
def prepare_dict(image_batch, token_batch, encoded_text_batch):
|
||||
return {
|
||||
'images': image_batch,
|
||||
'tokens': token_batch,
|
||||
'encoded_text': encoded_text_batch,
|
||||
}
|
||||
|
||||
|
||||
def prepare_dataset(image_paths, tokenized_texts, batch_size=1):
|
||||
dataset = tf.data.Dataset.from_tensor_slices((image_paths, tokenized_texts))
|
||||
dataset = dataset.shuffle(batch_size * 10)
|
||||
dataset = dataset.map(process_image, num_parallel_calls=AUTO).batch(
|
||||
batch_size
|
||||
)
|
||||
dataset = dataset.map(apply_augmentation, num_parallel_calls=AUTO)
|
||||
dataset = dataset.map(run_text_encoder, num_parallel_calls=AUTO)
|
||||
dataset = dataset.map(prepare_dict, num_parallel_calls=AUTO)
|
||||
return dataset.prefetch(AUTO)
|
||||
|
||||
|
||||
def prepare_training_dataset(dataset_csv):
|
||||
"""Prepares training datasets."""
|
||||
if dataset_csv.startswith(constants.GCS_URI_PREFIX):
|
||||
if not os.path.exists(constants.LOCAL_DATA_DIR):
|
||||
os.makedirs(constants.LOCAL_DATA_DIR)
|
||||
logging.info(
|
||||
'Start to download data from %s to %s.',
|
||||
os.path.dirname(dataset_csv),
|
||||
constants.LOCAL_DATA_DIR,
|
||||
)
|
||||
fileutils.download_gcs_dir_to_local(
|
||||
os.path.dirname(dataset_csv), constants.LOCAL_DATA_DIR
|
||||
)
|
||||
data_frame = pd.read_csv(
|
||||
os.path.join(constants.LOCAL_DATA_DIR, os.path.basename(dataset_csv))
|
||||
)
|
||||
data_frame['image_path'] = data_frame['image_path'].apply(
|
||||
lambda x: os.path.join(constants.LOCAL_DATA_DIR, x)
|
||||
)
|
||||
else:
|
||||
# Keeps the following codes for experiments with
|
||||
# https://keras.io/examples/generative/finetune_stable_diffusion/.
|
||||
data_path = tf.keras.utils.get_file(origin=dataset_csv, untar=True)
|
||||
data_frame = pd.read_csv(os.path.join(data_path, 'data.csv'))
|
||||
data_frame['image_path'] = data_frame['image_path'].apply(
|
||||
lambda x: os.path.join(data_path, x)
|
||||
)
|
||||
data_frame.head()
|
||||
|
||||
# Load the tokenizer.
|
||||
tokenizer = SimpleTokenizer()
|
||||
|
||||
# Method to tokenize and pad the tokens.
|
||||
def process_text(caption):
|
||||
tokens = tokenizer.encode(caption)
|
||||
tokens = tokens + [PADDING_TOKEN] * (MAX_PROMPT_LENGTH - len(tokens))
|
||||
return np.array(tokens)
|
||||
|
||||
# Collate the tokenized captions into an array.
|
||||
tokenized_texts = np.empty((len(data_frame), MAX_PROMPT_LENGTH))
|
||||
|
||||
all_captions = list(data_frame['caption'].values)
|
||||
for i, caption in enumerate(all_captions):
|
||||
tokenized_texts[i] = process_text(caption)
|
||||
|
||||
# Prepare the dataset.
|
||||
training_dataset = prepare_dataset(
|
||||
np.array(data_frame['image_path']), tokenized_texts, batch_size=4
|
||||
)
|
||||
|
||||
return training_dataset
|
||||
|
||||
|
||||
class Trainer(tf.keras.Model):
|
||||
"""The trainer for Keras Stable Diffusion."""
|
||||
|
||||
# Reference:
|
||||
# https://github.com/huggingface/diffusers/blob/main/examples/text_to_image/train_text_to_image.py
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
diffusion_model,
|
||||
vae,
|
||||
noise_scheduler,
|
||||
use_mixed_precision=False,
|
||||
max_grad_norm=1.0,
|
||||
**kwargs,
|
||||
):
|
||||
super().__init__(**kwargs)
|
||||
|
||||
self.diffusion_model = diffusion_model
|
||||
self.vae = vae
|
||||
self.noise_scheduler = noise_scheduler
|
||||
self.max_grad_norm = max_grad_norm
|
||||
|
||||
self.use_mixed_precision = use_mixed_precision
|
||||
self.vae.trainable = False
|
||||
|
||||
def train_step(self, inputs):
|
||||
images = inputs['images']
|
||||
encoded_text = inputs['encoded_text']
|
||||
batch_size = tf.shape(images)[0]
|
||||
|
||||
with tf.GradientTape() as tape:
|
||||
# Project image into the latent space and sample from it.
|
||||
latents = self.sample_from_encoder_outputs(
|
||||
self.vae(images, training=False)
|
||||
)
|
||||
# Know more about the magic number here:
|
||||
# https://keras.io/examples/generative/fine_tune_via_textual_inversion/
|
||||
latents = latents * 0.18215
|
||||
|
||||
# Sample noise that we'll add to the latents.
|
||||
noise = tf.random.normal(tf.shape(latents))
|
||||
|
||||
# Sample a random timestep for each image.
|
||||
timesteps = tnp.random.randint(
|
||||
0, self.noise_scheduler.train_timesteps, (batch_size,)
|
||||
)
|
||||
|
||||
# Add noise to the latents according to the noise magnitude at each
|
||||
# timestep (this is the forward diffusion process).
|
||||
noisy_latents = self.noise_scheduler.add_noise(
|
||||
tf.cast(latents, noise.dtype), noise, timesteps
|
||||
)
|
||||
|
||||
# Get the target for loss depending on the prediction type
|
||||
# just the sampled noise for now.
|
||||
target = noise # noise_schedule.predict_epsilon == True
|
||||
|
||||
# Predict the noise residual and compute loss.
|
||||
# pylint: disable=unnecessary-lambda
|
||||
timestep_embedding = tf.map_fn(
|
||||
lambda t: self.get_timestep_embedding(t), timesteps, dtype=tf.float32
|
||||
)
|
||||
timestep_embedding = tf.squeeze(timestep_embedding, 1)
|
||||
model_pred = self.diffusion_model(
|
||||
[noisy_latents, timestep_embedding, encoded_text], training=True
|
||||
)
|
||||
loss = self.compiled_loss(target, model_pred)
|
||||
if self.use_mixed_precision:
|
||||
loss = self.optimizer.get_scaled_loss(loss)
|
||||
|
||||
# Update parameters of the diffusion model.
|
||||
trainable_vars = self.diffusion_model.trainable_variables
|
||||
gradients = tape.gradient(loss, trainable_vars)
|
||||
if self.use_mixed_precision:
|
||||
gradients = self.optimizer.get_unscaled_gradients(gradients)
|
||||
gradients = [tf.clip_by_norm(g, self.max_grad_norm) for g in gradients]
|
||||
self.optimizer.apply_gradients(zip(gradients, trainable_vars))
|
||||
|
||||
return {m.name: m.result() for m in self.metrics}
|
||||
|
||||
def get_timestep_embedding(self, timestep, dim=320, max_period=10000):
|
||||
half = dim // 2
|
||||
log_max_preiod = tf.math.log(tf.cast(max_period, tf.float32))
|
||||
# The docker builds could not support unary `-`.
|
||||
# pylint: disable=invalid-unary-operand-type
|
||||
freqs = tf.math.exp(
|
||||
-log_max_preiod * tf.range(0, half, dtype=tf.float32) / half
|
||||
)
|
||||
args = tf.convert_to_tensor([timestep], dtype=tf.float32) * freqs
|
||||
embedding = tf.concat([tf.math.cos(args), tf.math.sin(args)], 0)
|
||||
embedding = tf.reshape(embedding, [1, -1])
|
||||
return embedding
|
||||
|
||||
def sample_from_encoder_outputs(self, outputs):
|
||||
mean, logvar = tf.split(outputs, 2, axis=-1)
|
||||
logvar = tf.clip_by_value(logvar, -30.0, 20.0)
|
||||
std = tf.exp(0.5 * logvar)
|
||||
sample = tf.random.normal(tf.shape(mean), dtype=mean.dtype)
|
||||
return mean + std * sample
|
||||
|
||||
def save_weights(
|
||||
self, filepath, overwrite=True, save_format=None, options=None
|
||||
):
|
||||
# Overriding this method will allow us to use the `ModelCheckpoint`
|
||||
# callback directly with this trainer class. In this case, it will
|
||||
# only checkpoint the `diffusion_model` since that's what we're training
|
||||
# during fine-tuning.
|
||||
self.diffusion_model.save_weights(
|
||||
filepath=filepath,
|
||||
overwrite=overwrite,
|
||||
save_format=save_format,
|
||||
options=options,
|
||||
)
|
||||
|
||||
|
||||
def main(_) -> None:
|
||||
# _INPUT_CSV_PATH and _OUTPUT_MODEL_DIR should have the format as
|
||||
# gs://<bucket_name>/<object_name>.
|
||||
if _INPUT_CSV_PATH.value:
|
||||
if not _INPUT_CSV_PATH.value.startswith(constants.GCS_URI_PREFIX):
|
||||
raise ValueError('The input csv path should be a gcs path like gs://<>')
|
||||
if _OUTPUT_MODEL_DIR.value:
|
||||
if not _OUTPUT_MODEL_DIR.value.startswith(constants.GCS_URI_PREFIX):
|
||||
raise ValueError('The output model dir should be a gcs path like gs://<>')
|
||||
|
||||
if _USE_MP.value:
|
||||
keras.mixed_precision.set_global_policy('mixed_float16')
|
||||
|
||||
image_encoder = ImageEncoder(RESOLUTION, RESOLUTION)
|
||||
diffusion_ft_trainer = Trainer(
|
||||
diffusion_model=DiffusionModel(RESOLUTION, RESOLUTION, MAX_PROMPT_LENGTH),
|
||||
# Remove the top layer from the encoder, which cuts off the variance and
|
||||
# only returns the mean.
|
||||
vae=tf.keras.Model(
|
||||
image_encoder.input,
|
||||
image_encoder.layers[-2].output,
|
||||
),
|
||||
noise_scheduler=NoiseScheduler(),
|
||||
use_mixed_precision=_USE_MP.value,
|
||||
)
|
||||
|
||||
optimizer = tf.keras.optimizers.experimental.AdamW(
|
||||
learning_rate=_LEARNING_RATE.value,
|
||||
weight_decay=_WEIGHT_DECAY.value,
|
||||
beta_1=_BETA_1.value,
|
||||
beta_2=_BETA_2.value,
|
||||
epsilon=_EPSILON.value,
|
||||
)
|
||||
diffusion_ft_trainer.compile(optimizer=optimizer, loss='mse')
|
||||
|
||||
training_dataset = prepare_training_dataset(_INPUT_CSV_PATH.value)
|
||||
|
||||
# Note: gcsfuse does not work for Keras. We saves the trained models locally
|
||||
# first, and then copy to gcs storages.
|
||||
if not os.path.exists(constants.LOCAL_MODEL_DIR):
|
||||
os.makedirs(constants.LOCAL_MODEL_DIR)
|
||||
# The default saved model is in HDF5.
|
||||
ckpt_path = os.path.join(constants.LOCAL_MODEL_DIR, 'saved_model.h5')
|
||||
ckpt_callback = tf.keras.callbacks.ModelCheckpoint(
|
||||
ckpt_path,
|
||||
save_weights_only=True,
|
||||
monitor='loss',
|
||||
mode='min',
|
||||
)
|
||||
diffusion_ft_trainer.fit(
|
||||
training_dataset, epochs=_EPOCHS.value, callbacks=[ckpt_callback]
|
||||
)
|
||||
|
||||
# Copies the files in constants.LOCAL_MODEL_DIR to output_model_dir.
|
||||
fileutils.upload_local_dir_to_gcs(
|
||||
constants.LOCAL_MODEL_DIR, _OUTPUT_MODEL_DIR.value
|
||||
)
|
||||
|
||||
return
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
app.run(main)
|
||||
-79
@@ -1,79 +0,0 @@
|
||||
# Dockerfile for serving dockers for transformers.
|
||||
#
|
||||
# To build:
|
||||
# docker build -f model_oss/transformers/dockerfile/serve.Dockerfile . -t ${YOUR_IMAGE_TAG}
|
||||
#
|
||||
# To push to gcr:
|
||||
# docker tag ${YOUR_IMAGE_TAG} gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
# docker push gcr.io/${YOUR_PROJECT}/${YOUR_IMAGE_TAG}
|
||||
# Switch to this base image for gpu serve.
|
||||
|
||||
FROM pytorch/torchserve:0.7.0-gpu
|
||||
|
||||
USER root
|
||||
|
||||
ENV infer_port=7080
|
||||
ENV mng_port=7081
|
||||
ENV model_name="transformers_serving"
|
||||
ENV PATH="/home/model-server/:${PATH}"
|
||||
|
||||
# Install libraries.
|
||||
ENV PIP_ROOT_USER_ACTION=ignore
|
||||
RUN python3 -m pip install --upgrade pip
|
||||
RUN pip install torch==1.13.1
|
||||
RUN pip install torchvision==0.14.1
|
||||
RUN pip install transformers==4.27.4
|
||||
RUN pip install datasets==2.9.0
|
||||
RUN pip install accelerate==0.17.0
|
||||
RUN pip install triton==2.0.0.dev20221120
|
||||
RUN pip install xformers==0.0.16
|
||||
RUN pip install google-cloud-storage==2.7.0
|
||||
RUN pip install absl-py==1.4.0
|
||||
|
||||
# Install libraries for document-question-answering.
|
||||
RUN apt-get update
|
||||
RUN apt-get install -y --no-install-recommends tesseract-ocr
|
||||
RUN pip install tesseract==0.1.3
|
||||
RUN pip install pytesseract==0.3.10
|
||||
|
||||
# Install tools.
|
||||
RUN apt-get update && apt-get install -y --no-install-recommends \
|
||||
curl \
|
||||
wget \
|
||||
vim
|
||||
|
||||
# Copy license.
|
||||
RUN wget https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/LICENSE
|
||||
|
||||
# Copy model artifacts.
|
||||
COPY model_oss/transformers/handler.py /home/model-server/handler.py
|
||||
COPY model_oss/util/ /home/model-server/util/
|
||||
ENV PYTHONPATH /home/model-server/
|
||||
|
||||
# Create torchserve configuration file.
|
||||
RUN echo \
|
||||
"default_response_timeout=1800\n" \
|
||||
"service_envelope=json\n" \
|
||||
"inference_address=http://0.0.0.0:${infer_port}\n" \
|
||||
"management_address=http://0.0.0.0:${mng_port}" >> /home/model-server/config.properties
|
||||
|
||||
# Expose ports.
|
||||
EXPOSE ${infer_port}
|
||||
EXPOSE ${mng_port}
|
||||
|
||||
# Archive model artifacts and dependencies.
|
||||
# Do not set --model-file and --serialized-file because model and checkpoint will be dynamically loaded in handler.py.
|
||||
RUN torch-model-archiver \
|
||||
--model-name=${model_name} \
|
||||
--version=1.0 \
|
||||
--handler=/home/model-server/handler.py \
|
||||
--runtime=python3 \
|
||||
--export-path=/home/model-server/model-store \
|
||||
--archive-format=default \
|
||||
--force
|
||||
|
||||
# Run Torchserve HTTP serve to respond to prediction requests.
|
||||
CMD ["torchserve", "--start", \
|
||||
"--ts-config", "/home/model-server/config.properties", \
|
||||
"--models", "${model_name}=${model_name}.mar", \
|
||||
"--model-store", "/home/model-server/model-store"]
|
||||
@@ -1,233 +0,0 @@
|
||||
"""Custom handler for huggingface/transformers models."""
|
||||
|
||||
# pylint: disable=g-multiple-import
|
||||
# pylint: disable=g-importing-member
|
||||
|
||||
import logging
|
||||
import os
|
||||
from typing import Any, List, Optional, Tuple
|
||||
|
||||
from PIL import Image
|
||||
import torch
|
||||
from transformers import (
|
||||
AutoProcessor,
|
||||
AutoTokenizer,
|
||||
Blip2ForConditionalGeneration,
|
||||
Blip2Processor,
|
||||
BlipForConditionalGeneration,
|
||||
BlipForQuestionAnswering,
|
||||
BlipProcessor,
|
||||
CLIPModel,
|
||||
)
|
||||
from transformers import pipeline
|
||||
from ts.torch_handler.base_handler import BaseHandler
|
||||
|
||||
from util import constants
|
||||
from util import fileutils
|
||||
from util import image_format_converter
|
||||
|
||||
DEFAULT_MODEL_ID = "openai/clip-vit-base-patch32"
|
||||
SALESFORCE_BLIP = "Salesforce/blip"
|
||||
SALESFORCE_BLIP2 = "Salesforce/blip2"
|
||||
FLAN_T5 = "flan-t5"
|
||||
BART_LARGE_CNN = "facebook/bart-large-cnn"
|
||||
|
||||
ZERO_CLASSIFICATION = "zero-shot-image-classification"
|
||||
FEATURE_EMBEDDING = "feature-embedding"
|
||||
ZERO_DETECTION = "zero-shot-object-detection"
|
||||
IMAGE_CAPTIONING = "image-to-text"
|
||||
VQA = "visual-question-answering"
|
||||
DQA = "document-question-answering"
|
||||
SUMMARIZATION = "summarization"
|
||||
SUMMARIZATION_TEMPLATE = (
|
||||
"Summarize the following news article:\n{input}\nSummary:\n"
|
||||
)
|
||||
|
||||
|
||||
class TransformersHandler(BaseHandler):
|
||||
"""Custom handler for huggingface/transformers models."""
|
||||
|
||||
def initialize(self, context: Any):
|
||||
"""Custom initialize."""
|
||||
|
||||
properties = context.system_properties
|
||||
self.map_location = (
|
||||
"cuda"
|
||||
if torch.cuda.is_available() and properties.get("gpu_id") is not None
|
||||
else "cpu"
|
||||
)
|
||||
self.device = torch.device(
|
||||
self.map_location + ":" + str(properties.get("gpu_id"))
|
||||
if torch.cuda.is_available() and properties.get("gpu_id") is not None
|
||||
else self.map_location
|
||||
)
|
||||
|
||||
self.manifest = context.manifest
|
||||
# The model id is can be either:
|
||||
# 1) a huggingface model card id, like "Salesforce/blip", or
|
||||
# 2) a GCS path to the model files, like "gs://foo/bar".
|
||||
# If it's a model card id, the model will be loaded from huggingface.
|
||||
self.model_id = (
|
||||
DEFAULT_MODEL_ID
|
||||
if os.environ.get("MODEL_ID") is None
|
||||
else os.environ["MODEL_ID"]
|
||||
)
|
||||
# Else it will be downloaded from GCS to local first.
|
||||
# Since the transformers from_pretrained API can't read from GCS.
|
||||
if self.model_id.startswith(constants.GCS_URI_PREFIX):
|
||||
gcs_path = self.model_id[len(constants.GCS_URI_PREFIX) :]
|
||||
local_model_dir = os.path.join(constants.LOCAL_MODEL_DIR, gcs_path)
|
||||
logging.info("Download %s to %s", self.model_id, local_model_dir)
|
||||
fileutils.download_gcs_dir_to_local(self.model_id, local_model_dir)
|
||||
self.model_id = local_model_dir
|
||||
|
||||
self.task = (
|
||||
ZERO_CLASSIFICATION
|
||||
if os.environ.get("TASK") is None
|
||||
else os.environ["TASK"]
|
||||
)
|
||||
logging.info(
|
||||
"Handler initializing task:%s, model:%s", self.task, self.model_id
|
||||
)
|
||||
|
||||
if SALESFORCE_BLIP in self.model_id:
|
||||
# pipeline() hasn't been ready for Salesforce/blip models.
|
||||
self.salesforce_blip = True
|
||||
self._create_blip_model()
|
||||
else:
|
||||
self.salesforce_blip = False
|
||||
if self.task == FEATURE_EMBEDDING:
|
||||
self.model = CLIPModel.from_pretrained(self.model_id).to(
|
||||
self.map_location
|
||||
)
|
||||
self.tokenizer = AutoTokenizer.from_pretrained(self.model_id)
|
||||
self.processor = AutoProcessor.from_pretrained(self.model_id)
|
||||
elif self.task == SUMMARIZATION and FLAN_T5 in self.model_id:
|
||||
self.pipeline = pipeline(
|
||||
task=self.task,
|
||||
model=self.model_id,
|
||||
torch_dtype=torch.bfloat16,
|
||||
device_map="auto",
|
||||
)
|
||||
else:
|
||||
self.pipeline = pipeline(
|
||||
task=self.task, model=self.model_id, device=self.device
|
||||
)
|
||||
|
||||
self.initialized = True
|
||||
logging.info("Handler initialization done.")
|
||||
|
||||
def _create_blip_model(self):
|
||||
"""A helper for creating BLIP and BLIP2 models."""
|
||||
if SALESFORCE_BLIP2 in self.model_id:
|
||||
self.torch_type = torch.float16
|
||||
self.processor = Blip2Processor.from_pretrained(self.model_id)
|
||||
self.model = Blip2ForConditionalGeneration.from_pretrained(
|
||||
self.model_id, torch_dtype=self.torch_type
|
||||
).to(self.map_location)
|
||||
else:
|
||||
self.torch_type = torch.float32
|
||||
self.processor = BlipProcessor.from_pretrained(self.model_id)
|
||||
if self.task == IMAGE_CAPTIONING:
|
||||
self.model = BlipForConditionalGeneration.from_pretrained(
|
||||
self.model_id
|
||||
).to(self.map_location)
|
||||
elif self.task == VQA:
|
||||
self.model = BlipForQuestionAnswering.from_pretrained(self.model_id).to(
|
||||
self.map_location
|
||||
)
|
||||
|
||||
def _reformat_detection_result(self, data: List[Any]) -> List[Any]:
|
||||
"""Reformat zero-shot-object-detection output."""
|
||||
if not data:
|
||||
return [data]
|
||||
boxes = {}
|
||||
boxes["label"] = data[0]["label"]
|
||||
boxes["boxes"] = []
|
||||
for item in data:
|
||||
box = {}
|
||||
box["score"] = item["score"]
|
||||
box.update(item["box"])
|
||||
boxes["boxes"].append(box)
|
||||
outputs = [boxes]
|
||||
return outputs
|
||||
|
||||
def preprocess(
|
||||
self, data: Any
|
||||
) -> Tuple[Optional[List[str]], Optional[List[Image.Image]]]:
|
||||
"""Preprocess input data."""
|
||||
texts = None
|
||||
images = None
|
||||
if "text" in data[0]:
|
||||
texts = [item["text"] for item in data]
|
||||
if "image" in data[0]:
|
||||
images = [
|
||||
image_format_converter.base64_to_image(item["image"]) for item in data
|
||||
]
|
||||
return texts, images
|
||||
|
||||
def inference(self, data: Any, *args, **kwargs) -> List[Any]:
|
||||
"""Run the inference."""
|
||||
texts, images = data
|
||||
preds = None
|
||||
if self.task == ZERO_CLASSIFICATION:
|
||||
preds = self.pipeline(images=images, candidate_labels=texts)
|
||||
elif self.task == ZERO_DETECTION:
|
||||
# The object detection pipeline doesn't support batch prediction.
|
||||
preds = self.pipeline(image=images[0], candidate_labels=texts[0])
|
||||
elif self.task == IMAGE_CAPTIONING:
|
||||
if self.salesforce_blip:
|
||||
inputs = self.processor(images[0], return_tensors="pt").to(
|
||||
self.map_location, self.torch_type
|
||||
)
|
||||
preds = self.model.generate(**inputs)
|
||||
preds = [
|
||||
self.processor.decode(preds[0], skip_special_tokens=True).strip()
|
||||
]
|
||||
else:
|
||||
preds = self.pipeline(images=images)
|
||||
elif self.task == VQA:
|
||||
# The VQA pipelines doesn't support batch prediction.
|
||||
if self.salesforce_blip:
|
||||
inputs = self.processor(images[0], texts[0], return_tensors="pt").to(
|
||||
self.map_location, self.torch_type
|
||||
)
|
||||
preds = self.model.generate(**inputs)
|
||||
preds = [
|
||||
self.processor.decode(preds[0], skip_special_tokens=True).strip()
|
||||
]
|
||||
else:
|
||||
preds = self.pipeline(image=images[0], question=texts[0])
|
||||
elif self.task == DQA:
|
||||
# The DQA pipelines doesn't support batch prediction.
|
||||
preds = self.pipeline(image=images[0], question=texts[0])
|
||||
elif self.task == FEATURE_EMBEDDING:
|
||||
preds = {}
|
||||
if texts:
|
||||
inputs = self.tokenizer(
|
||||
text=texts, padding=True, return_tensors="pt"
|
||||
).to(self.map_location)
|
||||
text_features = self.model.get_text_features(**inputs)
|
||||
preds["text_features"] = text_features.detach().cpu().numpy().tolist()
|
||||
if images:
|
||||
inputs = self.processor(images=images, return_tensors="pt").to(
|
||||
self.map_location
|
||||
)
|
||||
image_features = self.model.get_image_features(**inputs)
|
||||
preds["image_features"] = image_features.detach().cpu().numpy().tolist()
|
||||
preds = [preds]
|
||||
elif self.task == SUMMARIZATION and FLAN_T5 in self.model_id:
|
||||
texts = [SUMMARIZATION_TEMPLATE.format(input=text) for text in texts]
|
||||
preds = self.pipeline(texts, max_length=130)
|
||||
elif self.task == SUMMARIZATION and self.model_id == BART_LARGE_CNN:
|
||||
preds = self.pipeline(
|
||||
texts[0], max_length=130, min_length=30, do_sample=False
|
||||
)
|
||||
else:
|
||||
raise ValueError(f"Invalid TASK: {self.task}")
|
||||
return preds
|
||||
|
||||
def postprocess(self, data: Any) -> List[Any]:
|
||||
if self.task == ZERO_DETECTION:
|
||||
data = self._reformat_detection_result(data)
|
||||
return data
|
||||
@@ -1,64 +0,0 @@
|
||||
"""Vertex vision model garden util constants."""
|
||||
|
||||
# Objectives.
|
||||
OBJECTIVE_IMAGE_CLASSIFICATION = 'icn'
|
||||
OBJECTIVE_IMAGE_OBJECT_DETECTION = 'iod'
|
||||
OBJECTIVE_IMAGE_SEGMENTATION = 'isg'
|
||||
|
||||
# Input file types.
|
||||
INPUT_FILE_TYPE_CSV = 'csv'
|
||||
INPUT_FILE_TYPE_JSONL = 'jsonl'
|
||||
INPUT_FILE_TYPE_COCO_JSON = 'coco_json'
|
||||
|
||||
# Output file types.
|
||||
OUTPUT_FILE_TYPE_TFRECORD = 'tfrecord'
|
||||
OUTPUT_FILE_TYPE_COCO_JSON = 'coco_json'
|
||||
|
||||
# Best evaluation metrics.
|
||||
IMAGE_CLASSIFICATION_SINGLE_LABEL_BEST_EVAL_METRIC = 'accuracy'
|
||||
IMAGE_CLASSIFICATION_MULTI_LABEL_BEST_EVAL_METRIC = 'meanPR-AUC'
|
||||
|
||||
IMAGE_OBJECT_DETECTION_BEST_EVAL_METRIC = 'AP50'
|
||||
IMAGE_SEGMENTATION_BEST_EVAL_METRIC = 'mean_iou'
|
||||
|
||||
VIDEO_CLASSIFICATION_BEST_EVAL_METRIC = 'accuracy'
|
||||
|
||||
# Best checkpoints.
|
||||
BEST_CKPT_DIRNAME = 'best_ckpt'
|
||||
BEST_CKPT_EVAL_FILENAME = 'info.json'
|
||||
BEST_CKPT_STEP_NAME = 'best_ckpt_global_step'
|
||||
BEST_CKPT_METRIC_COMP = 'higher'
|
||||
|
||||
# Reported hyperparameter tuning metric tag.
|
||||
HP_METRIC_TAG = 'model_performance'
|
||||
|
||||
# HPT trial prefix.
|
||||
TRIAL_PREFIX = 'trial_'
|
||||
|
||||
# ML uses from user input.
|
||||
ML_USE_TRAINING = 'training'
|
||||
ML_USE_VALIDATION = 'validation'
|
||||
ML_USE_TEST = 'test'
|
||||
|
||||
# COCO json keys
|
||||
COCO_JSON_ANNOTATIONS = 'annotations'
|
||||
COCO_JSON_ANNOTATION_IMAGE_ID = 'image_id'
|
||||
COCO_JSON_ANNOTATION_CATEGORY_ID = 'category_id'
|
||||
COCO_JSON_CATEGORIES = 'categories'
|
||||
COCO_JSON_CATEGORY_ID = 'id'
|
||||
COCO_JSON_CATEGORY_NAME = 'name'
|
||||
COCO_JSON_FILE_NAME = 'file_name'
|
||||
COCO_JSON_IMAGES = 'images'
|
||||
COCO_JSON_IMAGE_ID = 'id'
|
||||
COCO_JSON_IMAGE_WIDTH = 'width'
|
||||
COCO_JSON_IMAGE_HEIGHT = 'height'
|
||||
COCO_JSON_IMAGE_COCO_URL = 'coco_url'
|
||||
COCO_ANNOTATION_BBOX = 'bbox'
|
||||
|
||||
# GCS prefixes
|
||||
GCS_URI_PREFIX = 'gs://'
|
||||
GCSFUSE_URI_PREFIX = '/gcs/'
|
||||
|
||||
LOCAL_EVALUATION_RESULT_DIR = '/tmp/evaluation_result_dir'
|
||||
LOCAL_MODEL_DIR = '/tmp/model_dir'
|
||||
LOCAL_DATA_DIR = '/tmp/data'
|
||||
@@ -1,79 +0,0 @@
|
||||
"""Fileutil lib to copy files between gcs and local."""
|
||||
|
||||
import glob
|
||||
import os
|
||||
|
||||
from absl import logging
|
||||
from google.cloud import storage
|
||||
|
||||
from util import constants
|
||||
|
||||
|
||||
def download_gcs_file_to_local(gcs_uri: str, local_path: str):
|
||||
"""Download a gcs file to a local path.
|
||||
|
||||
Args:
|
||||
gcs_uri: A string of file path on GCS.
|
||||
local_path: A string of local file path.
|
||||
"""
|
||||
if not gcs_uri.startswith(constants.GCS_URI_PREFIX):
|
||||
raise ValueError(
|
||||
f'{gcs_uri} is not a GCS path starting with {constants.GCS_URI_PREFIX}.'
|
||||
)
|
||||
client = storage.Client()
|
||||
os.makedirs(os.path.dirname(local_path), exist_ok=True)
|
||||
with open(local_path, 'wb') as f:
|
||||
client.download_blob_to_file(gcs_uri, f)
|
||||
|
||||
|
||||
def download_gcs_dir_to_local(gcs_dir: str, local_dir: str):
|
||||
"""Downloads files in a GCS directory to a local directory.
|
||||
|
||||
For example:
|
||||
download_gcs_dir_to_local(gs://bucket/foo, /tmp/bar)
|
||||
gs://bucket/foo/a -> /tmp/bar/a
|
||||
gs://bucket/foo/b/c -> /tmp/bar/b/c
|
||||
|
||||
Arguments:
|
||||
gcs_dir: A string of directory path on GCS.
|
||||
local_dir: A string of local directory path.
|
||||
"""
|
||||
bucket_name = gcs_dir.split('/')[2]
|
||||
prefix = gcs_dir[len(constants.GCS_URI_PREFIX + bucket_name) :].strip('/')
|
||||
client = storage.Client()
|
||||
blobs = client.list_blobs(bucket_name, prefix=prefix)
|
||||
for blob in blobs:
|
||||
if blob.name[-1] == '/':
|
||||
continue
|
||||
file_path = blob.name[len(prefix) :].strip('/')
|
||||
local_file_path = os.path.join(local_dir, file_path)
|
||||
os.makedirs(os.path.dirname(local_file_path), exist_ok=True)
|
||||
logging.info('Downloading %s to %s', file_path, local_file_path)
|
||||
blob.download_to_filename(local_file_path)
|
||||
|
||||
|
||||
def upload_local_dir_to_gcs(local_dir: str, gcs_dir: str):
|
||||
"""Uploads local dir to gcs.
|
||||
|
||||
For example:
|
||||
upload_local_dir_to_gcs(/tmp/bar, gs://bucket/foo)
|
||||
gs://bucket/foo/a -> /tmp/bar/a
|
||||
gs://bucket/foo/b/c -> /tmp/bar/b/c
|
||||
|
||||
Arguments:
|
||||
local_dir: A string of local directory path.
|
||||
gcs_dir: A string of directory path on GCS.
|
||||
"""
|
||||
bucket_name = gcs_dir.split('/')[2]
|
||||
blob_dir = '/'.join(gcs_dir.split('/')[3:])
|
||||
client = storage.Client()
|
||||
bucket = client.bucket(bucket_name)
|
||||
for local_file in glob.glob(local_dir + '/**'):
|
||||
if os.path.isfile(local_file):
|
||||
logging.info(
|
||||
'Uploading %s to %s',
|
||||
local_file,
|
||||
os.path.join(constants.GCS_URI_PREFIX, bucket_name, blob_dir),
|
||||
)
|
||||
blob = bucket.blob(os.path.join(blob_dir, os.path.basename(local_file)))
|
||||
blob.upload_from_filename(local_file)
|
||||
@@ -1,21 +0,0 @@
|
||||
"""Utility functions for Vertex Hyperparameter Tuning Jobs."""
|
||||
|
||||
import os
|
||||
|
||||
from absl import logging
|
||||
|
||||
_ENVIRONMENT_VARIABLE_FOR_TRIAL_ID = 'CLOUD_ML_TRIAL_ID'
|
||||
|
||||
|
||||
def get_trial_id_from_environment() -> str:
|
||||
"""Gets the trial id from environment variable.
|
||||
|
||||
Returns:
|
||||
The trial id from environement or '0' if not found.
|
||||
"""
|
||||
if _ENVIRONMENT_VARIABLE_FOR_TRIAL_ID not in os.environ:
|
||||
logging.warning(
|
||||
'Environment variable %s not found, return 0 as default trial id.',
|
||||
_ENVIRONMENT_VARIABLE_FOR_TRIAL_ID,
|
||||
)
|
||||
return os.environ.get(_ENVIRONMENT_VARIABLE_FOR_TRIAL_ID, '0')
|
||||
@@ -1,20 +0,0 @@
|
||||
"""Image format converter util lib."""
|
||||
|
||||
import base64
|
||||
import io
|
||||
|
||||
from PIL import Image
|
||||
|
||||
|
||||
def image_to_base64(image: Image.Image) -> str:
|
||||
"""Convert a PIL image to a base64 string."""
|
||||
buffer = io.BytesIO()
|
||||
image.save(buffer, format="JPEG")
|
||||
image_str = base64.b64encode(buffer.getvalue()).decode("utf-8")
|
||||
return image_str
|
||||
|
||||
|
||||
def base64_to_image(image_str: str) -> Image.Image:
|
||||
"""Convert a base64 string to a PIL image."""
|
||||
image = Image.open(io.BytesIO(base64.b64decode(image_str)))
|
||||
return image
|
||||
@@ -1,102 +0,0 @@
|
||||
# Administrative Howto notes on CI Notebook Ingestion
|
||||
|
||||
|
||||
This readme covers administrative actions that are performed on an as-needed basis.
|
||||
|
||||
## Team: vertex-ai-owners
|
||||
|
||||
Members of the vertex-ai-owners (git team) have administrative privileges.
|
||||
|
||||
|
||||
### Viewing members
|
||||
|
||||
1. Goto the repo
|
||||
2. From top-level menu, select: (Settings -> Collaborators and Teams)[https://github.com/GoogleCloudPlatform/vertex-ai-samples/settings/access]
|
||||
|
||||
|
||||
### Adding a new member
|
||||
|
||||
If another member needs to be added:
|
||||
- Have the new member make a request to join the team.
|
||||
- vertex-ai-owners with the `Maintainer` tag may add the new member.
|
||||
|
||||
|
||||
## Executing CI notebook ingestion checks on a PR
|
||||
|
||||
### Killing a stuck PR
|
||||
|
||||
If the CI notebook ingestion test is stuck (not terminating), you can kill the process by:
|
||||
|
||||
1. Goto the PR
|
||||
2. Under checks, find the entry: vertex-ai-notebook-execution-test (python-docs-samples-tests) In progress —> Summary
|
||||
3. Select Details
|
||||
4. At bottom of details page, select: View more details on Google Cloud Build
|
||||
5. In Cloud Build history page, select Cancel on the top menu bar.
|
||||
|
||||
### Restart a PR test
|
||||
|
||||
There are two ways to restart the CI notebook ingestion tests on an open PR.
|
||||
|
||||
1. In Cloud Build history page, select Rebuild on the top menu bar.
|
||||
2. or, in a comment in the PR enter: /gcbrun
|
||||
|
||||
## Bypassing CI notebook ingestion checks on a PR
|
||||
|
||||
We strongly discourage this, unless there is a compelling reason that would impact the integrity of the quality process.
|
||||
|
||||
There are two ways of doing this. In both cases, you do:
|
||||
|
||||
1. Goto the repo
|
||||
2. From top-level menu, select: (Settings -> Branches)[https://github.com/GoogleCloudPlatform/vertex-ai-samples/settings/branches]
|
||||
3. Under Branch Protection Rules, select the `main` branch.
|
||||
|
||||
### Allowing a member to disable requirements for merging
|
||||
|
||||
Specific member(s) can be assigned the ability to override requirements and merge a PR, by:
|
||||
|
||||
1. Select Edit for the `main` branch in Branch Protection Rules.
|
||||
2. Find the entry "Allow specified actors to bypass required pull requests".
|
||||
3. Under this entry, add the member's git LDAP.
|
||||
4. Select SAVE.
|
||||
5. The "Squash and Merge" button will now be enabled on all PRs viewed by that member.
|
||||
|
||||
### Temporarily disable checks.
|
||||
|
||||
You can disable requirement checks temporarily on all PRs.
|
||||
|
||||
1. Select Edit for the `main` branch in Branch Protection Rules.
|
||||
2. Uncheck:
|
||||
- Require approvals
|
||||
- Require review from Code Owners
|
||||
- Require status checks to pass before merging
|
||||
3. Select SAVE
|
||||
4. Now all members will see a green "Squash and Merge" on all PRs viewed by that member.
|
||||
|
||||
To reverse, recheck the settings you unchecked above.
|
||||
|
||||
## Linting
|
||||
|
||||
To execute the identical lint image locally, from the CI notebook ingestion checks, do:
|
||||
|
||||
1. Goto the corresponding local folder in the repo.
|
||||
2. Run: `docker run -v ${PWD}:/setup/app gcr.io/python-docs-samples-tests/notebook_linter:latest <your_notebooks>`
|
||||
|
||||
## Install dependency issues
|
||||
|
||||
Some packages (and combinations) have dependencies that fail on the virgin VM image used for the CI notebook ingestion test.
|
||||
|
||||
### TFDV
|
||||
|
||||
If the notebook installs and uses tensorflow_data_validation, install as follows:
|
||||
|
||||
! pip3 install -q {USER_FLAG} google-cloud-aiplatform \
|
||||
tensorflow-data-validation \
|
||||
protobuf==3.20.3
|
||||
|
||||
! pip3 install -q {USER_FLAG} cachetools==5.2.0
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
@@ -12,72 +12,25 @@
|
||||
|
||||
/managed_notebooks/
|
||||
/bigquery_ml/ @polong
|
||||
/sdk/SDK_FBProphet_Forecasting_Online.ipynb @brianchunkang
|
||||
/pipelines/google_cloud_pipeline_components_TPU_model_train_upload_deploy.ipynb @brianchunkang
|
||||
/explainable_ai/SDK_Custom_Container_XAI.ipynb @brianchunkang
|
||||
/matching_engine/sdk_matching_engine_for_indexing.ipynb @ivanmkc
|
||||
/matching_engine/matching_engine_for_indexing.ipynb @yinghsienwu
|
||||
/matching_engine/stream_update_for_matching_engine.ipynb @peterping666
|
||||
/sdk/pytorch_lightning_custom_container_training.ipynb @brianchunkang
|
||||
/sdk/sdk_pytorch_torchrun_custom_container_training_imagenet.ipynb @brianchunkang
|
||||
/tensorboard @yfang1
|
||||
/feature_store @nayaknishant @morgandu
|
||||
/prediction @googleapis/vertex-prediction-team
|
||||
/vertex_endpoints/tf_hub_obj_detection/deploy_tfhub_object_detection_on_vertex_endpoints.ipynb @entrpn
|
||||
/vertex_endpoints/find_ideal_machine_type/find_ideal_machine_type/find_ideal_machine_type.ipynb @entrpn
|
||||
/vertex_endpoints/nvidia-triton/nvidia-triton-custom-container-prediction.ipynb @RajeshThallam
|
||||
/vertex_endpoints/optimized_tensorflow_runtime @vlasenkoalexey
|
||||
/notebooks/community/ml_ops/stage2/get_started_with_visionapi_and_automl.ipynb @mansari
|
||||
/notebooks/community/neo4j/graph_paysim.ipynb @benofben @laeg
|
||||
/notebooks/community/ml_ops/stage1/get_started_with_visionapi_and_vertex_datasets.ipynb @mansari
|
||||
/notebooks/community/pipelines/google_cloud_pipeline_components_bqml_pipeline_demand_forecasting.ipynb @inardini
|
||||
/notebooks/community/cohere/cohere_embedding_with_matching_engine.ipynb @stewart-co
|
||||
/notebooks/community/ml_ops/stage2/get_started_vertex_hpt_r_kernel.ipynb @fhirschmann
|
||||
/notebooks/community/ml_ops/stage2/get_started_vertex_training_r_using_r_kernel.ipynb @fhirschmann
|
||||
/notebooks/community/ml_ops/stage3/get_started_with_dataflow_flex_template_component.ipynb @wintwoo
|
||||
/notebooks/community/vertex-ai-samples/notebooks/community/model_registry/vertex_ai_model_registry_bqml_custom_model_versioning.ipynb @inardini
|
||||
/notebooks/community/vertex-ai-samples/notebooks/community/model_registry/vertex_ai_model_registry_automl_model_versioning.ipynb @inardini
|
||||
/notebooks/community/vizier/conversions_vertex_vizier_and_open_source_vizier.ipynb @halio-g
|
||||
/notebooks/community/experiments/vertex_ai_model_experimentation.ipynb @inardini @asobran
|
||||
/notebooks/community/pipelines/google_cloud_pipeline_components_bqml_pipeline_anomaly_detection.ipynb @inardini
|
||||
/notebooks/community/pipelines/google_cloud_pipeline_components_cloud_natural_language_pipeline.ipynb @Narwhalprime
|
||||
/notebooks/community/pipelines/google_cloud_pipeline_components_ready_to_go_text_classification_pipeline.ipynb @Narwhalprime
|
||||
/notebooks/community/feature_store/get_started_vertex_feature_store.ipynb @junkourata
|
||||
/notebooks/community/model_garden/model_garden_huggingface_local_inference.ipynb @dstnluong-google
|
||||
/notebooks/community/model_garden/model_garden_mediapipe_image_classification.ipynb @schmidt-sebastian
|
||||
/notebooks/community/model_garden/model_garden_mediapipe_gesture_recognition.ipynb @schmidt-sebastian
|
||||
/notebooks/community/model_garden/model_garden_mediapipe_object_detection.ipynb @schmidt-sebastian
|
||||
/notebooks/community/model_garden/model_garden_mediapipe_text_classification.ipynb @schmidt-sebastian
|
||||
/notebooks/community/model_garden/model_garden_proprietary_image_classification.ipynb @weigary
|
||||
/notebooks/community/model_garden/model_garden_proprietary_image_object_detection.ipynb @weigary
|
||||
/notebooks/community/model_garden/model_garden_tfvision_image_classification.ipynb @genquan9
|
||||
/notebooks/community/model_garden/model_garden_tfvision_image_object_detection.ipynb @genquan9
|
||||
/notebooks/community/model_garden/model_garden_tfvision_image_segmentation.ipynb @genquan9
|
||||
/notebooks/community/model_garden/model_garden_pytorch_stable_diffusion.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_stable_diffusion_2_1.ipynb @bingatgoogle
|
||||
/notebooks/community/model_garden/model_garden_pytorch_stable_diffusion_inpainting.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_instructpix2pix.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_controlnet.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_blip_image_captioning.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_blip_vqa.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_vilt_vqa.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_vit_gpt2_image_captioning.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_clip.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_owlvit.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_layoutml_document_qa.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_blip2.ipynb @xiangxu-google
|
||||
/notebooks/community/model_garden/model_garden_pytorch_detectron2.ipynb @lavraicse
|
||||
/notebooks/community/model_garden/model_garden_pytorch_dolly_v2.ipynb @lavraicse
|
||||
/notebooks/community/model_garden/model_garden_pytorch_bart_large_cnn.ipynb @lavraicse
|
||||
/notebooks/community/model_garden/model_garden_jax_vision_transformer.ipynb @lavraicse
|
||||
/notebooks/community/model_garden/model_garden_pytorch_text_to_video_zero_shot.ipynb @bingatgoogle
|
||||
/notebooks/community/model_garden/model_garden_pytorch_text_to_video.ipynb @KCFindstr
|
||||
/notebooks/community/generative_ai/text_embedding_api_semantic_search_with_scann.ipynb @henrytansetiawan
|
||||
/notebooks/community/bigquery_ml_inference/bq_ml_with_vision_translation_nlp.ipynb @deaconsmith
|
||||
/notebooks/community/model_garden/model_garden_keras_stable_diffusion.ipynb @genquan9
|
||||
/notebooks/community/model_garden/model_garden_pytorch_sam.ipynb @huguensjean
|
||||
/notebooks/community/model_garden/model_garden_pytorch_pic2word.ipynb @jismailyan
|
||||
/notebooks/community/model_garden/model_garden_pytorch_peft.ipynb @genquan9
|
||||
/notebooks/community/model_garden/model_garden_pytorch_openllama_peft.ipynb @genquan9
|
||||
/notebooks/community/model_garden/model_garden_pytorch_falcon_instruct_peft.ipynb @genquan9
|
||||
/notebooks/community/model_garden/model_garden_movinet_clip_classification.ipynb @KCFindstr
|
||||
|
||||
|
||||
@@ -1,19 +0,0 @@
|
||||
|
||||
[Unstructured data analytics with BigQuery ML and Vertex AI pre-trained models](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/bigquery_ml/bq_ml_with_vision_translation_nlp.ipynb)
|
||||
|
||||
```
|
||||
Learn how to analyze unstructured data within BigQuery using BigQuery's inference engine. You will use BigQuery ML to connect to three pretrained Vertex AI APIs - Vision API, Translation API and Natural Language Processing API.
|
||||
|
||||
The steps performed include:
|
||||
|
||||
- Define pre-trained models for Vision AI, Translation AI and NLP AI in BigQuery ML
|
||||
- Call the Vision API (`ML.ANNOTATE_IMAGE`) to detect text in images stored in Cloud Storage
|
||||
You will need to create an object table in BigQuery to do this
|
||||
- Call the Translation API (`ML.TRANSLATE`) to detect the language of text, and translate non-English movie titles to English
|
||||
- Call the Natural Language API (`ML.UNDERSTAND_TEXT`) to run sentiment analysis over movie reviews stored in BigQuery
|
||||
|
||||
```
|
||||
|
||||
Check out the [blog for this notebook](https://cloud.google.com/blog/products/data-analytics/how-simplify-unstructured-data-analytics-using-bigquery-ml-and-vertex-ai).
|
||||
Learn more about [BigQuery ML inference engine](https://cloud.google.com/bigquery/docs/reference/standard-sql/inference-overview).
|
||||
|
||||
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Reference in New Issue
Block a user