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334 changed files with 837818 additions and 121154 deletions
+1 -5
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@@ -5,8 +5,6 @@ from resource_cleanup_manager import (
ModelResourceCleanupManager,
EndpointResourceCleanupManager,
ResourceCleanupManager,
MatchingEngineIndexEndpointResourceCleanupManager,
MatchingEngineIndexResourceCleanupManager,
)
rate_limit = RateLimit(max_count=25, per=60, greedy=False)
@@ -42,12 +40,10 @@ if is_dry_run:
print("Starting cleanup in dry run mode...")
# List of all cleanup managers
managers: List[ResourceCleanupManager] = [
managers = [
DatasetResourceCleanupManager(),
EndpointResourceCleanupManager(),
ModelResourceCleanupManager(), # ModelResourceCleanupManager must follow EndpointResourceCleanupManager due to deployed models blocking model deletion.
MatchingEngineIndexEndpointResourceCleanupManager(),
MatchingEngineIndexResourceCleanupManager(),
]
run_cleanup_managers(managers=managers, is_dry_run=is_dry_run)
@@ -109,11 +109,3 @@ class EndpointResourceCleanupManager(VertexAIResourceCleanupManager):
class ModelResourceCleanupManager(VertexAIResourceCleanupManager):
vertex_ai_resource = aiplatform.Model
class MatchingEngineIndexResourceCleanupManager(VertexAIResourceCleanupManager):
vertex_ai_resource = aiplatform.MatchingEngineIndex
class MatchingEngineIndexEndpointResourceCleanupManager(VertexAIResourceCleanupManager):
vertex_ai_resource = aiplatform.MatchingEngineIndexEndpoint
@@ -17,16 +17,13 @@ import concurrent
import dataclasses
import datetime
import functools
import json
import git
import operator
import os
import pathlib
import re
import subprocess
import utils
from typing import List, Optional
from utils import util
import execute_notebook_helper
import execute_notebook_remote
@@ -38,7 +35,6 @@ from utils import NotebookProcessors, util
# A buffer so that workers finish before the orchestrating job
WORKER_TIMEOUT_BUFFER_IN_SECONDS: int = 60 * 60
PYTHON_VERSION = "3.9" # Set default python version
def format_timedelta(delta: datetime.timedelta) -> str:
@@ -70,7 +66,6 @@ class NotebookExecutionResult:
log_url: str
output_uri: str
build_id: str
logs_bucket: str
error_message: Optional[str]
@property
@@ -102,7 +97,6 @@ def _process_notebook(
"VPC_NETWORK": variable_vpc_network,
},
)
unique_strings_preprocessor = NotebookProcessors.UniqueStringsPreprocessor()
# Use no-execute preprocessor
(
@@ -111,41 +105,11 @@ def _process_notebook(
) = remove_no_execute_cells_preprocessor.preprocess(nb)
(nb, resources) = update_variables_preprocessor.preprocess(nb, resources)
(nb, resources) = unique_strings_preprocessor.preprocess(nb, resources)
with open(notebook_path, mode="w", encoding="utf-8") as new_file:
nbformat.write(nb, new_file)
def _get_notebook_python_version(notebook_path: str) -> str:
"""
Get the python version for running the notebook if it is specified in
the notebook.
"""
python_version = PYTHON_VERSION
# Load the notebook
file = open(notebook_path)
src = file.read()
nb_json = json.loads(src)
# Iterate over the cells in the ipynb
for cell in nb_json["cells"]:
if cell["cell_type"] == "markdown":
markdown = str.join("", cell["source"])
# Look for the python version specification pattern
re_match = re.search(
"python version = (\d\.\d)", markdown, flags=re.IGNORECASE
)
if re_match:
# get the version number
python_version = re_match.group(1)
break
return python_version
def _create_tag(filepath: str) -> str:
tag = os.path.basename(os.path.normpath(filepath))
tag = re.sub("[^0-9a-zA-Z_.-]+", "-", tag)
@@ -196,7 +160,6 @@ def process_and_execute_notebook(
output_uri=notebook_output_uri,
log_url="",
build_id="",
logs_bucket="",
error_message=None,
)
@@ -204,12 +167,6 @@ def process_and_execute_notebook(
time_start = datetime.datetime.now()
operation = None
try:
# Get the python version for running the notebook if specified
notebook_exec_python_version = _get_notebook_python_version(
notebook_path=notebook
)
print(f"Running notebook with python {notebook_exec_python_version}")
# Pre-process notebook by substituting variable names
_process_notebook(
notebook_path=notebook,
@@ -236,16 +193,14 @@ def process_and_execute_notebook(
private_pool_id=private_pool_id,
private_pool_region=variable_region,
timeout_in_seconds=timeout_in_seconds,
python_version=notebook_exec_python_version,
)
operation_metadata = BuildOperationMetadata(mapping=operation.metadata)
result.build_id = operation_metadata.build.id
result.log_url = operation_metadata.build.log_url
result.logs_bucket = operation_metadata.build.logs_bucket
# Block and wait for the result
operation_result = operation.result(timeout=timeout_in_seconds)
operation_result = operation.result()
result.duration = datetime.datetime.now() - time_start
result.is_pass = True
@@ -384,7 +339,7 @@ def process_and_execute_notebooks(
seconds=max(timeout - WORKER_TIMEOUT_BUFFER_IN_SECONDS, 0)
)
if len(notebooks) >= 1:
if len(notebooks) > 1:
notebook_execution_results: List[NotebookExecutionResult] = []
print(f"Found {len(notebooks)} modified notebooks: {notebooks}")
@@ -449,7 +404,6 @@ def process_and_execute_notebooks(
result.log_url,
result.output_uri,
result.output_uri_web,
result.logs_bucket,
]
for result in results_sorted
],
@@ -460,35 +414,10 @@ def process_and_execute_notebooks(
"log_url",
"output_uri",
"output_uri_web",
"logs_bucket",
],
)
)
if len(notebooks) == 1:
print("=" * 100)
print("The notebook execution build log:\n")
print("=" * 100)
build_id = results_sorted[0].build_id
logs_bucket_name = (results_sorted[0].logs_bucket).removeprefix("gs://")
log_file_name = f"log-{build_id}.txt"
log_contents = util.download_blob_into_memory(
bucket_name=logs_bucket_name,
blob_name=log_file_name,
download_as_text=True,
)
# Remove extra steps from the log
match = re.search("starting Step #4", log_contents, flags=re.IGNORECASE)
if match is not None:
match_index = match.span()[0]
print(log_contents[match_index:])
else:
print(log_contents)
print("\n=== END RESULTS===\n")
total_notebook_duration = functools.reduce(
@@ -504,5 +433,25 @@ def process_and_execute_notebooks(
# Raise error if any notebooks failed
if not all([result.is_pass for result in results_sorted]):
raise RuntimeError("Notebook failures detected. See logs for details")
elif len(notebooks) == 1:
notebook = notebooks[0]
# Pre-process notebook by substituting variable names
_process_notebook(
notebook_path=notebook,
variable_project_id=variable_project_id,
variable_region=variable_region,
variable_service_account=variable_service_account,
variable_vpc_network=variable_vpc_network,
)
execute_notebook_helper.execute_notebook(
notebook_source=notebook,
output_file_or_uri="/".join(
[artifacts_bucket, pathlib.Path(notebook).name]
),
should_log_output=True,
)
else:
print("No notebooks modified in this pull request.")
-5
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@@ -40,7 +40,6 @@ def execute_notebook_remote(
private_pool_region: Optional[str],
tag: Optional[str],
timeout_in_seconds: Optional[int] = None,
python_version: Optional[str] = None
) -> operation.Operation:
"""Create and execute a single notebook on Google Cloud Build"""
# Load build steps from YAML
@@ -51,12 +50,8 @@ def execute_notebook_remote(
"_PYTHON_IMAGE": container_uri,
"_NOTEBOOK_GCS_URI": notebook_uri,
"_NOTEBOOK_OUTPUT_GCS_URI": notebook_output_uri,
"_PYTHON_VERSION" : f"python{python_version}"
}
if python_version is not None:
substitutions["_PYTHON_VERSION"] = "python" + python_version
build = cloudbuild_v1.Build()
options: Optional[client_options.ClientOptions] = None
@@ -10,21 +10,21 @@ steps:
entrypoint: /bin/sh
args:
- -c
- ${_PYTHON_VERSION} .cloud-build/CheckPythonVersion.py -q
- python3 .cloud-build/CheckPythonVersion.py -q
# Create a virtual environment
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- ${_PYTHON_VERSION} -m venv workspace/env
- python3 -m venv workspace/env
# Install Python dependencies
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
args:
- -c
- . workspace/env/bin/activate &&
python -m pip -q install -U pip &&
python -m pip -q install -U -r .cloud-build/requirements.txt
python3 -m pip -q install -U pip &&
python3 -m pip -q install -U -r .cloud-build/requirements.txt
# Install Python dependencies and run testing script
- name: ${_PYTHON_IMAGE}
entrypoint: /bin/sh
@@ -32,7 +32,7 @@ steps:
- -c
- |
. workspace/env/bin/activate &&
python .cloud-build/execute_notebook_cli.py --notebook_source "${_NOTEBOOK_GCS_URI}" --output_file_or_uri "${_NOTEBOOK_OUTPUT_GCS_URI}"
python3 .cloud-build/execute_notebook_cli.py --notebook_source "${_NOTEBOOK_GCS_URI}" --output_file_or_uri "${_NOTEBOOK_OUTPUT_GCS_URI}"
env:
- 'IS_TESTING=1'
timeout: 86400s
+1 -1
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@@ -10,4 +10,4 @@ google-cloud-aiplatform
google-cloud-storage
google-cloud-build
ratemate
GitPython
GitPython
+2 -2
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@@ -1,5 +1,5 @@
notebooks/official/vizier/gapic-vizier-multi-objective-optimization.ipynb
notebooks/official/pipelines/lightweight_functions_component_io_kfp.ipynb
notebooks/official/ml_metadata/sdk-metric-parameter-tracking-for-locally-trained-models.ipynb
notebooks/official/custom/custom-tabular-bq-managed-dataset.ipynb
.cloud-build/tests/python_version_test.ipynb
notebooks/official/pipelines/metrics_viz_run_compare_kfp.ipynb
notebooks/official/matching_engine/sdk_matching_engine_for_indexing.ipynb
+1 -1
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@@ -1 +1 @@
notebooks/official/custom/custom-tabular-bq-managed-dataset.ipynb
notebooks/official/pipelines/metrics_viz_run_compare_kfp.ipynb
@@ -1,61 +0,0 @@
{
"cells": [
{
"cell_type": "markdown",
"metadata": {
"id": "57a3d44ed8a8"
},
"source": [
"### Set up your Google Cloud project\n",
"\n",
"**_NOTE_**: This notebook has been tested in the following environment:\n",
"\n",
"* Python version = 3.7\n",
"\n",
"**The following steps are required, regardless of your notebook environment.**\n",
"\n",
"1. [Select or create a Google Cloud project](https://console.cloud.google.com/cloud-resource-manager). When you first create an account, you get a $300 free credit towards your compute/storage costs.\n",
"\n",
"1. [Make sure that billing is enabled for your project](https://cloud.google.com/billing/docs/how-to/modify-project).\n",
"\n",
"1. [Enable the Vertex AI API and Compute Engine API](https://console.cloud.google.com/flows/enableapi?apiid=aiplatform.googleapis.com,compute_component).\n",
"\n",
"1. If you are running this notebook locally, you will need to install the [Cloud SDK](https://cloud.google.com/sdk).\n",
"\n",
"1. Enter your project ID in the cell below. Then run the cell to make sure the\n",
"Cloud SDK uses the right project for all the commands in this notebook.\n",
"\n",
"**Note**: Jupyter runs lines prefixed with `!` as shell commands, and it interpolates Python variables prefixed with `$` into these commands."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "c6516f90311b"
},
"outputs": [],
"source": [
"# test if the right python version is being used\n",
"import sys\n",
"\n",
"actual_python_version = f\"{sys.version_info.major}.{sys.version_info.minor}\"\n",
"print(f\"Runtime python version: {actual_python_version}\")\n",
"\n",
"assert actual_python_version == \"3.7\", \"Wrong python version!\""
]
}
],
"metadata": {
"colab": {
"name": "python_version_test.ipynb",
"toc_visible": true
},
"kernelspec": {
"display_name": "Python 3",
"name": "python3"
}
},
"nbformat": 4,
"nbformat_minor": 0
}
-35
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@@ -14,8 +14,6 @@
# limitations under the License.
from typing import Dict
import random
import string
from nbconvert.preprocessors import Preprocessor
@@ -65,36 +63,3 @@ class UpdateVariablesPreprocessor(Preprocessor):
executable_cells.append(cell)
notebook.cells = executable_cells
return notebook, resources
# Generate a uuid of a specifed length
def generate_uuid(length: int = 8) -> str:
return "".join(random.choices(string.ascii_lowercase + string.digits, k=length))
class UniqueStringsPreprocessor(Preprocessor):
# A preprocessor that replaces strings that end with "-unique" or "_unique" with a uuid.
@staticmethod
def update_unique_strings(content: str):
# Replace strings that end with "-unique" or "_unique" with a uuid.
unique_id = generate_uuid()
return (
content.replace('-unique"', f'-{unique_id}"')
.replace("-unique'", f'-{unique_id}"')
.replace('_unique"', f'_{unique_id}"')
.replace("_unique'", f'_{unique_id}"')
)
def preprocess(self, notebook, resources=None):
executable_cells = []
for cell in notebook.cells:
if cell.cell_type == "code":
cell.source = self.update_unique_strings(
content=cell.source,
)
executable_cells.append(cell)
notebook.cells = executable_cells
return notebook, resources
@@ -40,3 +40,65 @@ def get_updated_value(content: str, variable_name: str, variable_value: str) ->
content,
flags=re.M,
)
def test_update_value():
new_content = get_updated_value(
content='asdf\nPROJECT_ID = "[your-project-id]" #@param {type:"string"} \nasdf',
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert (
new_content
== 'asdf\nPROJECT_ID = "sample-project" #@param {type:"string"} \nasdf'
)
def test_update_value_single_quotes():
new_content = get_updated_value(
content="PROJECT_ID = '[your-project-id]'",
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert new_content == "PROJECT_ID = 'sample-project'"
def test_update_value_avoidance():
new_content = get_updated_value(
content="PROJECT_ID = shell_output[0] ",
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert new_content == "PROJECT_ID = shell_output[0] "
def test_region():
new_content = get_updated_value(
content='REGION = "[your-region]" # @param {type:"string"}',
variable_name="REGION",
variable_value="us-central1",
)
assert new_content == 'REGION = "us-central1" # @param {type:"string"}'
def test_region_equal_equals_ignore():
# Tests that == is ignored
new_content = get_updated_value(
content='REGION == "[your-region]" # @param {type:"string"}',
variable_name="REGION",
variable_value="us-central1",
)
assert new_content == 'REGION == "[your-region]" # @param {type:"string"}'
def test_service_account():
# Tests that == is ignored
new_content = get_updated_value(
content='SERVICE_ACCOUNT = "[your-service-account]" # @param {type:"string"}',
variable_name="SERVICE_ACCOUNT",
variable_value="12345-compute@developer.gserviceaccount.com",
)
assert (
new_content
== 'SERVICE_ACCOUNT = "12345-compute@developer.gserviceaccount.com" # @param {type:"string"}'
)
@@ -1,14 +0,0 @@
from utils import NotebookProcessors
def test_update_value():
# Test that the content was updated
preprocessor = NotebookProcessors.UniqueStringsPreprocessor()
content = 'PROJECT_ID = "your-project-id-unique"'
new_content = preprocessor.update_unique_strings(content)
assert new_content != content
assert new_content.startswith('PROJECT_ID = "your-project-id-')
assert new_content.endswith('"')
@@ -1,63 +0,0 @@
from utils import UpdateNotebookVariables
def test_update_value():
new_content = UpdateNotebookVariables.get_updated_value(
content='asdf\nPROJECT_ID = "[your-project-id]" #@param {type:"string"} \nasdf',
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert (
new_content
== 'asdf\nPROJECT_ID = "sample-project" #@param {type:"string"} \nasdf'
)
def test_update_value_single_quotes():
new_content = UpdateNotebookVariables.get_updated_value(
content="PROJECT_ID = '[your-project-id]'",
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert new_content == "PROJECT_ID = 'sample-project'"
def test_update_value_avoidance():
new_content = UpdateNotebookVariables.get_updated_value(
content="PROJECT_ID = shell_output[0] ",
variable_name="PROJECT_ID",
variable_value="sample-project",
)
assert new_content == "PROJECT_ID = shell_output[0] "
def test_region():
new_content = UpdateNotebookVariables.get_updated_value(
content='REGION = "[your-region]" # @param {type:"string"}',
variable_name="REGION",
variable_value="us-central1",
)
assert new_content == 'REGION = "us-central1" # @param {type:"string"}'
def test_region_equal_equals_ignore():
# Tests that == is ignored
new_content = UpdateNotebookVariables.get_updated_value(
content='REGION == "[your-region]" # @param {type:"string"}',
variable_name="REGION",
variable_value="us-central1",
)
assert new_content == 'REGION == "[your-region]" # @param {type:"string"}'
def test_service_account():
# Tests that == is ignored
new_content = UpdateNotebookVariables.get_updated_value(
content='SERVICE_ACCOUNT = "[your-service-account]" # @param {type:"string"}',
variable_name="SERVICE_ACCOUNT",
variable_value="12345-compute@developer.gserviceaccount.com",
)
assert (
new_content
== 'SERVICE_ACCOUNT = "12345-compute@developer.gserviceaccount.com" # @param {type:"string"}'
)
+1 -27
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@@ -3,7 +3,7 @@ import subprocess
import tarfile
import uuid
from datetime import datetime
from typing import Optional, Union
from typing import Optional
from google.auth import credentials as auth_credentials
from google.cloud import storage
@@ -58,29 +58,3 @@ def archive_code_and_upload(staging_bucket: str):
print(f"Uploaded source code archive to {source_archived_file_gcs}")
return source_archived_file_gcs
def download_blob_into_memory(
bucket_name: str, blob_name: str, download_as_text: Optional[bool] = False
) -> Union[bytes, str]:
"""
Downloads a blob into memory as byte or as text if
download_as_text is set to True.
"""
storage_client = storage.Client()
bucket = storage_client.bucket(bucket_name)
# Construct a client side representation of a blob.
blob = bucket.blob(blob_name)
# Download the blob content
if download_as_text:
contents = blob.download_as_text()
else:
contents = blob.download_as_bytes()
print(f"Downloaded storage object {blob_name} from bucket {bucket_name}.")
return contents
-20
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@@ -1,20 +0,0 @@
# To use this image, run this command with the desired notebook args from the top-level vertex-ai-samples directory:
# 1. To lint all changed notebooks:
# docker run -v ${PWD}:/setup/app gcr.io/python-docs-samples-tests/notebook_linter:latest
# 2. To lint specific notebooks:
# docker run -v ${PWD}:/setup/app gcr.io/python-docs-samples-tests/notebook_linter:latest notebooks/1.ipynb notebooks/2.ipynb
FROM python:3.10
WORKDIR setup
COPY ./requirements.txt .
COPY ./run_linter.sh .
# Install dependencies.
RUN pip install --upgrade pip
RUN pip install -r requirements.txt
WORKDIR app
ENTRYPOINT ["/setup/run_linter.sh"]
+3 -3
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@@ -2,9 +2,9 @@ git+https://github.com/tensorflow/docs
ipython
jupyter
nbconvert
black==22.10.0
pyupgrade==2.38.4
black==22.6.0
pyupgrade==2.34.0
isort==5.10.1
flake8==4.0.1
nbqa==1.5.3
nbqa==1.4.0
+4 -14
View File
@@ -47,22 +47,12 @@ done
echo "Test mode: $is_test"
# Read in user-provided notebooks
notebooks=()
for arg in "$@"; do
if [[ $arg == *.ipynb ]]; then
notebooks+=("$arg")
fi
done
# Only check notebooks in test folders modified in this pull request.
# Note: Use process substitution to persist the data in the array
if [ ${#notebooks[@]} -eq 0 ]; then
echo "Checking for changed notebooked using git"
while read -r file || [ -n "$line" ]; do
notebooks+=("$file")
done < <(git diff --name-only main... | grep '\.ipynb$')
fi
notebooks=()
while read -r file || [ -n "$line" ]; do
notebooks+=("$file")
done < <(git diff --name-only main... | grep '\.ipynb$')
problematic_notebooks=()
if [ ${#notebooks[@]} -gt 0 ]; then
-4
View File
@@ -1,11 +1,7 @@
* @vertex-ai-samples-contributors @GoogleCloudPlatform/cloudml-samples-owners
/tf_agents_bandits_movie_recommendation_with_kfp_and_vertex_sdk @yinghsienwu
/pytorch_pre_built_images_deployment @googleapis/vertex-prediction-team
/pytorch_text_classification_using_vertex_sdk_and_gcloud @RajeshThallam
/pytorch_text_classification_using_vertex_sdk_and_gcloud @RajeshThallam @ultrons
/sklearn_text_classification_from_script_using_vertex_sdk @maxhardt
/pluto_on_workbench @wkharold
/cpr-examples @samthrasher
/Train_tabular_models_with_many_frameworks_and_import_to_Vertex_AI_using_Pipelines @Ark-kun
/pipeline_components @Ark-kun
/pipeline_components/image_ml_model_training @lakeyk
@@ -1,83 +0,0 @@
name: Train tabular classification logistic regression model using Scikit learn pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_logistic_regression_model_using_Scikit_learn_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
componentRef:
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: '> 0'
new_column_name: class
annotations:
editor.position: '{"x":40,"y":380,"width":180,"height":54}'
Train logistic regression model using scikit learn from CSV:
componentRef:
digest: a864625a822e4b1c8ef6fe4ae1454fd90f15438f70a6712bb4c30e0dda4d35b7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/cb44b75c9c062fcc40c2b905b2024b4493dbc62b/components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
label_column_name: class
annotations:
editor.position: '{"x":40,"y":510,"width":180,"height":70}'
Upload Scikit learn pickle model to Google Cloud Vertex AI:
componentRef:
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train logistic regression model using scikit learn from CSV
type: ScikitLearnPickleModel
annotations:
editor.position: '{"x":40,"y":660,"width":180,"height":70}'
outputValues: {}
@@ -1,73 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
train_logistic_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml")
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_logistic_regression_model_using_Scikit_learn_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
training_data = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
training_data = select_columns_using_Pandas_on_CSV_data_op(
table=training_data,
column_names=all_columns,
).outputs["transformed_table"]
# Cleaning the NaN values.
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=training_data,
replacement_value="0",
#replacement_type_name="float",
).outputs["transformed_table"]
classification_training_data = binarize_column_using_Pandas_on_CSV_data_op(
table=training_data,
column_name=label_column,
predicate="> 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
model = train_logistic_regression_model_using_scikit_learn_from_CSV_op(
dataset=classification_training_data,
label_column_name=classification_label_column,
# Optional:
#penalty="l2",
#solver="lbfgs",
#max_iterations=100,
#multi_class_mode="auto",
#random_seed=0,
).outputs["model"]
vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_classification_logistic_regression_model_using_Scikit_learn_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,114 +0,0 @@
name: Train tabular classification model using PyTorch pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_PyTorch_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":240,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":240,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":240,"y":250,"width":180,"height":54}'
Create fully connected pytorch network:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
output_activation_name: sigmoid
annotations:
editor.position: '{"x":40,"y":360,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
componentRef:
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: ' > 0'
new_column_name: class
annotations:
editor.position: '{"x":240,"y":360,"width":180,"height":54}'
Train pytorch model from csv:
componentRef:
digest: 40f3185eb61e9727f41a4e0c05dd3d3b44bd802aa0f378cfc31756560033949a
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/d8c4cf5e6403bc65bcf8d606e6baf87e2528a3dc/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Create fully connected pytorch network
type: PyTorchScriptModule
training_data:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
label_column_name: class
loss_function_name: binary_cross_entropy
annotations:
editor.position: '{"x":240,"y":490,"width":180,"height":40}'
Create PyTorch Model Archive with base handler:
componentRef:
digest: 8298b5ee1b0f0879f893add4cf352c8dec7cf9e21bb9db134c91a2d046cdb0ec
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/46d51383e6554b7f3ab4fd8cf614d8c2b422fb22/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml
arguments:
Model:
taskOutput:
outputName: trained_model
taskId: Train pytorch model from csv
type: PyTorchScriptModule
Model name: model
Model version: '1.0'
annotations:
editor.position: '{"x":240,"y":590,"width":180,"height":54}'
Upload PyTorch model archive to Google Cloud Vertex AI:
componentRef:
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model_archive:
taskOutput:
outputName: Model archive
taskId: Create PyTorch Model Archive with base handler
type: PyTorchModelArchive
annotations:
editor.position: '{"x":240,"y":720,"width":180,"height":70}'
outputValues: {}
@@ -1,95 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_model_using_PyTorch_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
training_data = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
training_data = select_columns_using_Pandas_on_CSV_data_op(
table=training_data,
column_names=all_columns,
).outputs["transformed_table"]
# Cleaning the NaN values.
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=training_data,
replacement_value="0",
#replacement_type_name="float",
).outputs["transformed_table"]
classification_training_data = binarize_column_using_Pandas_on_CSV_data_op(
table=training_data,
column_name=label_column,
predicate=" > 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
network = create_fully_connected_pytorch_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
output_activation_name="sigmoid",
# output_size=1,
).outputs["model"]
model = train_pytorch_model_from_csv_op(
model=network,
training_data=classification_training_data,
label_column_name=classification_label_column,
loss_function_name="binary_cross_entropy",
# Optional:
#number_of_epochs=1,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#batch_log_interval=100,
#random_seed=0,
).outputs["trained_model"]
model_archive = create_pytorch_model_archive_with_base_handler_op(
model=model,
# Optional:
# model_name="model",
# model_version="1.0",
).outputs["Model archive"]
vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
model_archive=model_archive,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_classification_model_using_PyTorch_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,132 +0,0 @@
name: Train tabular classification model using TensorFlow pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_TensorFlow_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
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arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
componentRef:
digest: d699afd4d7cae862708717cc160f4394ed0c04e536e9515923ef1e8865f01d44
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: ' > 0'
new_column_name: class
annotations:
editor.position: '{"x":40,"y":370,"width":180,"height":54}'
Split rows into subsets:
componentRef:
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arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":170,"y":500,"width":180,"height":40}'
Create fully connected tensorflow network:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
output_activation_name: sigmoid
annotations:
editor.position: '{"x":370,"y":500,"width":180,"height":54}'
Train model using Keras on CSV:
componentRef:
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arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Create fully connected tensorflow network
type: TensorflowSavedModel
label_column_name: class
loss_function_name: binary_crossentropy
number_of_epochs: '10'
annotations:
editor.position: '{"x":40,"y":620,"width":180,"height":54}'
Upload Tensorflow model to Google Cloud Vertex AI:
componentRef:
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arguments:
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
annotations:
editor.position: '{"x":40,"y":750,"width":180,"height":54}'
Predict with TensorFlow model on CSV data:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/59c759ce6f543184e30db6817d2a703879bc0f39/components/tensorflow/Predict/on_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
label_column_name: class
annotations:
editor.position: '{"x":240,"y":750,"width":180,"height":54}'
outputValues: {}
@@ -1,106 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_model_using_TensorFlow_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
classification_dataset = binarize_column_using_Pandas_on_CSV_data_op(
table=dataset,
column_name=label_column,
predicate=" > 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=classification_dataset,
fraction_1=training_set_fraction,
)
classification_training_data = split_task.outputs["split_1"]
classification_testing_data = split_task.outputs["split_2"]
network = create_fully_connected_tensorflow_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
output_activation_name="sigmoid",
# output_size=1,
).outputs["model"]
model = train_model_using_Keras_on_CSV_op(
training_data=classification_training_data,
model=network,
label_column_name=classification_label_column,
# Optional:
loss_function_name="binary_crossentropy",
number_of_epochs=10,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#metric_names=["mean_absolute_error"],
#random_seed=0,
).outputs["trained_model"]
predictions = predict_with_TensorFlow_model_on_CSV_data_op(
dataset=classification_testing_data,
model=model,
# label_column_name needs to be set when doing prediction on a dataset that has labels
label_column_name=classification_label_column,
# Optional:
# batch_size=1000,
).outputs["predictions"]
vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_classification_model_using_TensorFlow_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,115 +0,0 @@
name: Train tabular classification model using XGBoost pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_XGBoost_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
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arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1e2558325f4c708aca75827c8acc13d230ee7e9f/components/pandas/Binarize_column/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: '> 0'
new_column_name: class
annotations:
editor.position: '{"x":40,"y":380,"width":180,"height":54}'
Split rows into subsets:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":170,"y":510,"width":180,"height":40}'
Train XGBoost model on CSV:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: class
objective: binary:logistic
annotations:
editor.position: '{"x":40,"y":630,"width":180,"height":40}'
Upload XGBoost model to Google Cloud Vertex AI:
componentRef:
digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
annotations:
editor.position: '{"x":40,"y":750,"width":180,"height":54}'
Xgboost predict on CSV:
componentRef:
digest: 0876233a0c7306fefec188bd70f059b46d1fb5aa57be231799570e3bbbdd0d95
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/4694ec97baccf59284c2a1db4aa2250c22291eab/components/XGBoost/Predict/component.yaml
arguments:
data:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
label_column_name: class
annotations:
editor.position: '{"x":240,"y":750,"width":180,"height":40}'
outputValues: {}
@@ -1,94 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_model_using_XGBoost_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
classification_dataset = binarize_column_using_Pandas_on_CSV_data_op(
table=dataset,
column_name=label_column,
predicate="> 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=classification_dataset,
fraction_1=training_set_fraction,
)
classification_training_data = split_task.outputs["split_1"]
classification_testing_data = split_task.outputs["split_2"]
model = train_XGBoost_model_on_CSV_op(
training_data=classification_training_data,
label_column_name=classification_label_column,
objective="binary:logistic",
# Optional:
#starting_model=None,
#num_iterations=10,
#booster_params={},
#booster="gbtree",
#learning_rate=0.3,
#min_split_loss=0,
#max_depth=6,
).outputs["model"]
# Predicting on the testing data
predictions = xgboost_predict_on_CSV_op(
data=classification_testing_data,
model=model,
# label_column needs to be set when doing prediction on a dataset that has labels
label_column_name=classification_label_column,
).outputs["predictions"]
vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_classification_model_using_XGBoost_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,257 +0,0 @@
name: Train tabular classification model using all frameworks pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_classification_model_using_all_frameworks_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":550,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
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arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":550,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
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arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":550,"y":250,"width":180,"height":54}'
Binarize column using Pandas on CSV data:
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arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
column_name: tips
predicate: ' > 0'
new_column_name: class
annotations:
editor.position: '{"x":550,"y":380,"width":180,"height":54}'
Split rows into subsets:
componentRef:
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arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Binarize column using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
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arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
output_activation_name: sigmoid
annotations:
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input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
output_activation_name: sigmoid
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arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Create fully connected tensorflow network
type: TensorflowSavedModel
label_column_name: class
loss_function_name: binary_crossentropy
number_of_epochs: '10'
annotations:
editor.position: '{"x":40,"y":750,"width":180,"height":54}'
Train pytorch model from csv:
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arguments:
model:
taskOutput:
outputName: model
taskId: Create fully connected pytorch network
type: PyTorchScriptModule
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: class
loss_function_name: binary_cross_entropy
annotations:
editor.position: '{"x":380,"y":750,"width":180,"height":40}'
Train XGBoost model on CSV:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: class
objective: binary:logistic
annotations:
editor.position: '{"x":720,"y":750,"width":180,"height":40}'
Train logistic regression model using scikit learn from CSV:
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arguments:
dataset:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: class
annotations:
editor.position: '{"x":1030,"y":750,"width":180,"height":70}'
Predict with TensorFlow model on CSV data:
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arguments:
dataset:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
label_column_name: class
annotations:
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Create PyTorch Model Archive with base handler:
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arguments:
Model:
taskOutput:
outputName: trained_model
taskId: Train pytorch model from csv
type: PyTorchScriptModule
Model name: model
Model version: '1.0'
annotations:
editor.position: '{"x":380,"y":880,"width":180,"height":54}'
Xgboost predict on CSV:
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arguments:
data:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
label_column_name: class
annotations:
editor.position: '{"x":810,"y":880,"width":180,"height":40}'
Upload Scikit learn pickle model to Google Cloud Vertex AI:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train logistic regression model using scikit learn from CSV
type: ScikitLearnPickleModel
annotations:
editor.position: '{"x":1030,"y":880,"width":180,"height":70}'
Upload Tensorflow model to Google Cloud Vertex AI:
componentRef:
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arguments:
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
annotations:
editor.position: '{"x":40,"y":1010,"width":180,"height":54}'
Upload PyTorch model archive to Google Cloud Vertex AI:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model_archive:
taskOutput:
outputName: Model archive
taskId: Create PyTorch Model Archive with base handler
type: PyTorchModelArchive
annotations:
editor.position: '{"x":380,"y":1010,"width":180,"height":70}'
Upload XGBoost model to Google Cloud Vertex AI:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
annotations:
editor.position: '{"x":720,"y":1010,"width":180,"height":54}'
outputValues: {}
@@ -1,224 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
binarize_column_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Binarize_column/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
# TensorFlow
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
# PyTorch
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
# XGBoost
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
# Scikit-learn
#train_linear_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml")
train_logistic_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml")
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
# Vertex AI
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_classification_model_using_all_frameworks_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
classification_label_column = "class"
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
classification_dataset = binarize_column_using_Pandas_on_CSV_data_op(
table=dataset,
column_name=label_column,
predicate=" > 0",
new_column_name=classification_label_column,
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=classification_dataset,
fraction_1=training_set_fraction,
)
classification_training_data = split_task.outputs["split_1"]
classification_testing_data = split_task.outputs["split_2"]
# TensorFlow
tensorflow_network = create_fully_connected_tensorflow_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
output_activation_name="sigmoid",
# output_size=1,
).outputs["model"]
tensorflow_model = train_model_using_Keras_on_CSV_op(
training_data=classification_training_data,
model=tensorflow_network,
label_column_name=classification_label_column,
# Optional:
loss_function_name="binary_crossentropy",
number_of_epochs=10,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#metric_names=["mean_absolute_error"],
#random_seed=0,
).outputs["trained_model"]
tensorflow_predictions = predict_with_TensorFlow_model_on_CSV_data_op(
dataset=classification_testing_data,
model=tensorflow_model,
# label_column_name needs to be set when doing prediction on a dataset that has labels
label_column_name=classification_label_column,
# Optional:
# batch_size=1000,
).outputs["predictions"]
tensorflow_vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
model=tensorflow_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
tensorflow_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=tensorflow_vertex_model_name,
).outputs["endpoint_name"]
# PyTorch
pytorch_network = create_fully_connected_pytorch_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
output_activation_name="sigmoid",
# output_size=1,
).outputs["model"]
pytorch_model = train_pytorch_model_from_csv_op(
model=pytorch_network,
training_data=classification_training_data,
label_column_name=classification_label_column,
loss_function_name="binary_cross_entropy",
# Optional:
#number_of_epochs=1,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#batch_log_interval=100,
#random_seed=0,
).outputs["trained_model"]
pytorch_model_archive = create_pytorch_model_archive_with_base_handler_op(
model=pytorch_model,
# Optional:
# model_name="model",
# model_version="1.0",
).outputs["Model archive"]
pytorch_vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
model_archive=pytorch_model_archive,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
pytorch_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=pytorch_vertex_model_name,
).outputs["endpoint_name"]
# XGBoost
xgboost_model = train_XGBoost_model_on_CSV_op(
training_data=classification_training_data,
label_column_name=classification_label_column,
objective="binary:logistic",
# Optional:
#starting_model=None,
#num_iterations=10,
#booster_params={},
#booster="gbtree",
#learning_rate=0.3,
#min_split_loss=0,
#max_depth=6,
).outputs["model"]
# Predicting on the testing data
xgboost_predictions = xgboost_predict_on_CSV_op(
data=classification_testing_data,
model=xgboost_model,
# label_column needs to be set when doing prediction on a dataset that has labels
label_column_name=classification_label_column,
).outputs["predictions"]
xgboost_vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
model=xgboost_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
xgboost_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=xgboost_vertex_model_name,
).outputs["endpoint_name"]
# Scikit-learn
sklearn_model = train_logistic_regression_model_using_scikit_learn_from_CSV_op(
dataset=classification_training_data,
label_column_name=classification_label_column,
# Optional:
#penalty="l2",
#solver="lbfgs",
#max_iterations=100,
#multi_class_mode="auto",
#random_seed=0,
).outputs["model"]
sklearn_vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
model=sklearn_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=sklearn_vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_classification_model_using_all_frameworks_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,68 +0,0 @@
name: Train tabular regression linear model using Scikit learn pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_linear_model_using_Scikit_learn_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Train linear regression model using scikit learn from CSV:
componentRef:
digest: c7fe7912ab0d1fb45d201d452e9ce6be5544e7d8c6d229db7a4b931ff58560f3
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/f807e02b54d4886c65a05f40848fd51c72407f40/components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
label_column_name: tips
annotations:
editor.position: '{"x":40,"y":360,"width":180,"height":54}'
Upload Scikit learn pickle model to Google Cloud Vertex AI:
componentRef:
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train linear regression model using scikit learn from CSV
type: ScikitLearnPickleModel
annotations:
editor.position: '{"x":40,"y":490,"width":180,"height":70}'
outputValues: {}
@@ -1,57 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
train_linear_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml")
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_linear_model_using_Scikit_learn_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
all_columns = [label_column] + feature_columns
# Deploying the model might incur additional costs over time
deploy_model = False
training_data = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
training_data = select_columns_using_Pandas_on_CSV_data_op(
table=training_data,
column_names=all_columns,
).outputs["transformed_table"]
# Cleaning the NaN values.
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=training_data,
replacement_value="0",
#replacement_type_name="float",
).outputs["transformed_table"]
model = train_linear_regression_model_using_scikit_learn_from_CSV_op(
dataset=training_data,
label_column_name=label_column,
).outputs["model"]
vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_regression_linear_model_using_Scikit_learn_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,97 +0,0 @@
name: Train tabular regression model using PyTorch pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_PyTorch_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":240,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":240,"y":130,"width":180,"height":54}'
Create fully connected pytorch network:
componentRef:
digest: d03d8248fd358a0275ec33568ee7dd7dce576cc112b09dfafe2651e4d97e04a9
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
annotations:
editor.position: '{"x":40,"y":240,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":240,"y":240,"width":180,"height":54}'
Train pytorch model from csv:
componentRef:
digest: 40f3185eb61e9727f41a4e0c05dd3d3b44bd802aa0f378cfc31756560033949a
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/d8c4cf5e6403bc65bcf8d606e6baf87e2528a3dc/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Create fully connected pytorch network
type: PyTorchScriptModule
training_data:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
label_column_name: tips
annotations:
editor.position: '{"x":240,"y":380,"width":180,"height":40}'
Create PyTorch Model Archive with base handler:
componentRef:
digest: 8298b5ee1b0f0879f893add4cf352c8dec7cf9e21bb9db134c91a2d046cdb0ec
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/46d51383e6554b7f3ab4fd8cf614d8c2b422fb22/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml
arguments:
Model:
taskOutput:
outputName: trained_model
taskId: Train pytorch model from csv
type: PyTorchScriptModule
Model name: model
Model version: '1.0'
annotations:
editor.position: '{"x":240,"y":500,"width":180,"height":54}'
Upload PyTorch model archive to Google Cloud Vertex AI:
componentRef:
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model_archive:
taskOutput:
outputName: Model archive
taskId: Create PyTorch Model Archive with base handler
type: PyTorchModelArchive
annotations:
editor.position: '{"x":240,"y":630,"width":180,"height":70}'
outputValues: {}
@@ -1,85 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_model_using_PyTorch_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
all_columns = [label_column] + feature_columns
# Deploying the model might incur additional costs over time
deploy_model = False
training_data = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
training_data = select_columns_using_Pandas_on_CSV_data_op(
table=training_data,
column_names=all_columns,
).outputs["transformed_table"]
# Cleaning the NaN values.
training_data = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=training_data,
replacement_value="0",
#replacement_type_name="float",
).outputs["transformed_table"]
network = create_fully_connected_pytorch_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
# output_activation_name=None,
# output_size=1,
).outputs["model"]
model = train_pytorch_model_from_csv_op(
model=network,
training_data=training_data,
label_column_name=label_column,
# Optional:
#loss_function_name="mse_loss",
#number_of_epochs=1,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#batch_log_interval=100,
#random_seed=0,
).outputs["trained_model"]
model_archive = create_pytorch_model_archive_with_base_handler_op(
model=model,
# Optional:
# model_name="model",
# model_version="1.0",
).outputs["Model archive"]
vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
model_archive=model_archive,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_regression_model_using_PyTorch_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,116 +0,0 @@
name: Train tabular regression model using Tensorflow pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_TensorFlow_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Split rows into subsets:
componentRef:
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":170,"y":380,"width":180,"height":40}'
Create fully connected tensorflow network:
componentRef:
digest: bfcafbc5ce711b1f69cabf1338212d10d50136a73db9f9f7c984de7b80b4bfb0
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
annotations:
editor.position: '{"x":370,"y":380,"width":180,"height":54}'
Train model using Keras on CSV:
componentRef:
digest: 42ae60c889034dbad74815653e95b4f7d576b5f47f803173e8679c7b54984609
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c504a4010348c50eaaf6d4337586ccc008f4dcef/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Create fully connected tensorflow network
type: TensorflowSavedModel
label_column_name: tips
number_of_epochs: '10'
metric_names: '["mean_absolute_error"]'
annotations:
editor.position: '{"x":40,"y":500,"width":180,"height":54}'
Upload Tensorflow model to Google Cloud Vertex AI:
componentRef:
digest: 2e45263ff640b1a688e359b6936e27a81b2407749a84f340af2aa5547e0cb92c
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
annotations:
editor.position: '{"x":40,"y":630,"width":180,"height":54}'
Predict with TensorFlow model on CSV data:
componentRef:
digest: 921bb1563e93a78233b8acceab87055b9154ccf5595d056028cf0396ca224cd4
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/59c759ce6f543184e30db6817d2a703879bc0f39/components/tensorflow/Predict/on_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
label_column_name: tips
annotations:
editor.position: '{"x":240,"y":630,"width":180,"height":54}'
outputValues: {}
@@ -1,97 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_model_using_Tensorflow_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=dataset,
fraction_1=training_set_fraction,
)
training_data = split_task.outputs["split_1"]
testing_data = split_task.outputs["split_2"]
network = create_fully_connected_tensorflow_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
# output_activation_name=None,
# output_size=1,
).outputs["model"]
model = train_model_using_Keras_on_CSV_op(
training_data=training_data,
model=network,
label_column_name=label_column,
# Optional:
#loss_function_name="mean_squared_error",
number_of_epochs=10,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
metric_names=["mean_absolute_error"],
#random_seed=0,
).outputs["trained_model"]
predictions = predict_with_TensorFlow_model_on_CSV_data_op(
dataset=testing_data,
model=model,
# label_column_name needs to be set when doing prediction on a dataset that has labels
label_column_name=label_column,
# Optional:
# batch_size=1000,
).outputs["predictions"]
vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_regression_model_using_Tensorflow_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,99 +0,0 @@
name: Train tabular regression model using XGBoost pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_XGBoost_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
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arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":40,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
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arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":40,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
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arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":40,"y":250,"width":180,"height":54}'
Split rows into subsets:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":170,"y":360,"width":180,"height":40}'
Train XGBoost model on CSV:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: tips
annotations:
editor.position: '{"x":40,"y":480,"width":180,"height":40}'
Upload XGBoost model to Google Cloud Vertex AI:
componentRef:
digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
annotations:
editor.position: '{"x":40,"y":600,"width":180,"height":54}'
Xgboost predict on CSV:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/4694ec97baccf59284c2a1db4aa2250c22291eab/components/XGBoost/Predict/component.yaml
arguments:
data:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
label_column_name: tips
annotations:
editor.position: '{"x":240,"y":600,"width":180,"height":40}'
outputValues: {}
@@ -1,85 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_model_using_XGBoost_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=dataset,
fraction_1=training_set_fraction,
)
training_data = split_task.outputs["split_1"]
testing_data = split_task.outputs["split_2"]
model = train_XGBoost_model_on_CSV_op(
training_data=training_data,
label_column_name=label_column,
# Optional:
#starting_model=None,
#num_iterations=10,
#booster_params={},
#objective="reg:squarederror",
#booster="gbtree",
#learning_rate=0.3,
#min_split_loss=0,
#max_depth=6,
).outputs["model"]
# Predicting on the testing data
predictions = xgboost_predict_on_CSV_op(
data=testing_data,
model=model,
# label_column needs to be set when doing prediction on a dataset that has labels
label_column_name=label_column,
).outputs["predictions"]
vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
model=model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs["endpoint_name"]
pipeline_func = train_tabular_regression_model_using_XGBoost_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,238 +0,0 @@
name: Train tabular regression model using all frameworks pipeline
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/samples/Google_Cloud_Vertex_AI/Train_tabular_regression_model_using_all_frameworks_and_import_to_Vertex_AI/pipeline.component.yaml
sdk: https://cloud-pipelines.net/pipeline-editor/
implementation:
graph:
tasks:
Download from GCS:
componentRef:
digest: 4175c9ff143cb8cc75d05451c0a0ebdf5a0d6d020816e29f5e9cefbb7d56f241
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/27a5ea25e849c9e8c0cb6ed65518bc3ece259aaf/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
GCS path: gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv
annotations:
editor.position: '{"x":550,"y":40,"width":180,"height":40}'
Select columns using Pandas on CSV data:
componentRef:
digest: 9b9500f461c1d04f1e48992de9138db14a6800f23649d73048673d5ea6dc56ad
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/8c78aae096806cff3bc331a40566f42f5c3e9d4b/components/pandas/Select_columns/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: Data
taskId: Download from GCS
column_names: '["tips", "trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"]'
annotations:
editor.position: '{"x":550,"y":140,"width":180,"height":54}'
Fill all missing values using Pandas on CSV data:
componentRef:
digest: a1b0c29a4615f2e3652aa5d31b9255fa15700e146627c755f8fc172f82e71af7
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/23405971f5f16a41b16c343129b893c52e4d1d48/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Select columns using Pandas on CSV data
type: CSV
replacement_value: '0'
annotations:
editor.position: '{"x":550,"y":250,"width":180,"height":54}'
Split rows into subsets:
componentRef:
digest: a609c3c9196484290f24a1174955f95b27f07a7b458aa5cb8cde28866cb2cb46
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/daae5a4abaa35e44501818b1534ed7827d7da073/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml
arguments:
table:
taskOutput:
outputName: transformed_table
taskId: Fill all missing values using Pandas on CSV data
type: CSV
fraction_1: '0.8'
annotations:
editor.position: '{"x":550,"y":360,"width":180,"height":40}'
Create fully connected pytorch network:
componentRef:
digest: d03d8248fd358a0275ec33568ee7dd7dce576cc112b09dfafe2651e4d97e04a9
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/1a2ef3eeb77bc278f33cad0dd29008ea2431e191/components/PyTorch/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
annotations:
editor.position: '{"x":380,"y":490,"width":180,"height":54}'
Create fully connected tensorflow network:
componentRef:
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url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/9ca0f9eecf5f896f65b8538bbd809747052617d1/components/tensorflow/Create_fully_connected_network/component.yaml
arguments:
input_size: '7'
hidden_layer_sizes: '[10]'
activation_name: elu
annotations:
editor.position: '{"x":40,"y":500,"width":180,"height":54}'
Train model using Keras on CSV:
componentRef:
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arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Create fully connected tensorflow network
type: TensorflowSavedModel
label_column_name: tips
number_of_epochs: '10'
metric_names: '["mean_absolute_error"]'
annotations:
editor.position: '{"x":40,"y":620,"width":180,"height":54}'
Train pytorch model from csv:
componentRef:
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arguments:
model:
taskOutput:
outputName: model
taskId: Create fully connected pytorch network
type: PyTorchScriptModule
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: tips
annotations:
editor.position: '{"x":380,"y":620,"width":180,"height":40}'
Train XGBoost model on CSV:
componentRef:
digest: 538c5a01eb38deaf532d619f0bbeaff4efc550fe1f0f776fc06791097b68ceac
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/58d3a47f904f32a64af8403330ba7e2134cae46d/components/XGBoost/Train/component.yaml
arguments:
training_data:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: tips
annotations:
editor.position: '{"x":720,"y":620,"width":180,"height":40}'
Train linear regression model using scikit learn from CSV:
componentRef:
digest: c7fe7912ab0d1fb45d201d452e9ce6be5544e7d8c6d229db7a4b931ff58560f3
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/f807e02b54d4886c65a05f40848fd51c72407f40/components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: split_1
taskId: Split rows into subsets
type: CSV
label_column_name: tips
annotations:
editor.position: '{"x":1030,"y":620,"width":180,"height":54}'
Predict with TensorFlow model on CSV data:
componentRef:
digest: 921bb1563e93a78233b8acceab87055b9154ccf5595d056028cf0396ca224cd4
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/59c759ce6f543184e30db6817d2a703879bc0f39/components/tensorflow/Predict/on_CSV/component.yaml
arguments:
dataset:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
label_column_name: tips
annotations:
editor.position: '{"x":160,"y":750,"width":180,"height":54}'
Create PyTorch Model Archive with base handler:
componentRef:
digest: 8298b5ee1b0f0879f893add4cf352c8dec7cf9e21bb9db134c91a2d046cdb0ec
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/46d51383e6554b7f3ab4fd8cf614d8c2b422fb22/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml
arguments:
Model:
taskOutput:
outputName: trained_model
taskId: Train pytorch model from csv
type: PyTorchScriptModule
Model name: model
Model version: '1.0'
annotations:
editor.position: '{"x":380,"y":750,"width":180,"height":54}'
Xgboost predict on CSV:
componentRef:
digest: 0876233a0c7306fefec188bd70f059b46d1fb5aa57be231799570e3bbbdd0d95
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/4694ec97baccf59284c2a1db4aa2250c22291eab/components/XGBoost/Predict/component.yaml
arguments:
data:
taskOutput:
outputName: split_2
taskId: Split rows into subsets
type: CSV
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
label_column_name: tips
annotations:
editor.position: '{"x":810,"y":750,"width":180,"height":40}'
Upload Scikit learn pickle model to Google Cloud Vertex AI:
componentRef:
digest: 81c91c8d7d21ec97e0872f669d68bd89edea87279d703685db54aa94743bebcd
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train linear regression model using scikit learn from CSV
type: ScikitLearnPickleModel
annotations:
editor.position: '{"x":1030,"y":750,"width":180,"height":70}'
Upload Tensorflow model to Google Cloud Vertex AI:
componentRef:
digest: 2e45263ff640b1a688e359b6936e27a81b2407749a84f340af2aa5547e0cb92c
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: trained_model
taskId: Train model using Keras on CSV
type: TensorflowSavedModel
annotations:
editor.position: '{"x":40,"y":880,"width":180,"height":54}'
Upload PyTorch model archive to Google Cloud Vertex AI:
componentRef:
digest: 4450212fae7b9001482aca7eb78b28413c205506eccf08a04e7754a8dfa99004
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model_archive:
taskOutput:
outputName: Model archive
taskId: Create PyTorch Model Archive with base handler
type: PyTorchModelArchive
annotations:
editor.position: '{"x":380,"y":880,"width":180,"height":70}'
Upload XGBoost model to Google Cloud Vertex AI:
componentRef:
digest: 5a5a273c403670743820986c03a4175b7cb4595a556524fefcce403656286977
url: https://raw.githubusercontent.com/Ark-kun/pipeline_components/c6a8b67d1ada2cc17665c99ff6b410df588bee28/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml
arguments:
model:
taskOutput:
outputName: model
taskId: Train XGBoost model on CSV
type: XGBoostModel
annotations:
editor.position: '{"x":720,"y":880,"width":180,"height":54}'
outputValues: {}
@@ -1,208 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
# %% Loading components
download_from_gcs_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/storage/download/component.yaml")
select_columns_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Select_columns/in_CSV_format/component.yaml")
fill_all_missing_values_using_Pandas_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml")
split_rows_into_subsets_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml")
# TensorFlow
create_fully_connected_tensorflow_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Create_fully_connected_network/component.yaml")
train_model_using_Keras_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml")
predict_with_TensorFlow_model_on_CSV_data_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/tensorflow/Predict/on_CSV/component.yaml")
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml")
# PyTorch
create_fully_connected_pytorch_network_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_fully_connected_network/component.yaml")
train_pytorch_model_from_csv_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml")
create_pytorch_model_archive_with_base_handler_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml")
upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/component.yaml")
# XGBoost
train_XGBoost_model_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Train/component.yaml")
xgboost_predict_on_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/XGBoost/Predict/component.yaml")
upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/component.yaml")
# Scikit-learn
train_linear_regression_model_using_scikit_learn_from_CSV_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/1f5cf6e06409b704064b2086c0a705e4e6b4fcde/community-content/pipeline_components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml")
upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/component.yaml")
# Vertex AI
deploy_model_to_endpoint_op = components.load_component_from_url("https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml")
# %% Pipeline definition
def train_tabular_regression_model_using_all_frameworks_pipeline():
dataset_gcs_uri = "gs://ml-pipeline-dataset/Chicago_taxi_trips/chicago_taxi_trips_2019-01-01_-_2019-02-01_limit=10000.csv"
feature_columns = ["trip_seconds", "trip_miles", "pickup_community_area", "dropoff_community_area", "fare", "tolls", "extras"] # Excluded "trip_total"
label_column = "tips"
training_set_fraction = 0.8
# Deploying the model might incur additional costs over time
deploy_model = False
all_columns = [label_column] + feature_columns
dataset = download_from_gcs_op(
gcs_path=dataset_gcs_uri
).outputs["Data"]
dataset = select_columns_using_Pandas_on_CSV_data_op(
table=dataset,
column_names=all_columns,
).outputs["transformed_table"]
dataset = fill_all_missing_values_using_Pandas_on_CSV_data_op(
table=dataset,
replacement_value="0",
# # Optional:
# column_names=None, # =[...]
).outputs["transformed_table"]
split_task = split_rows_into_subsets_op(
table=dataset,
fraction_1=training_set_fraction,
)
training_data = split_task.outputs["split_1"]
testing_data = split_task.outputs["split_2"]
# TensorFlow
tensorflow_network = create_fully_connected_tensorflow_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
# output_activation_name=None,
# output_size=1,
).outputs["model"]
tensorflow_model = train_model_using_Keras_on_CSV_op(
training_data=training_data,
model=tensorflow_network,
label_column_name=label_column,
# Optional:
#loss_function_name="mean_squared_error",
number_of_epochs=10,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
metric_names=["mean_absolute_error"],
#random_seed=0,
).outputs["trained_model"]
tensorflow_predictions = predict_with_TensorFlow_model_on_CSV_data_op(
dataset=testing_data,
model=tensorflow_model,
# label_column_name needs to be set when doing prediction on a dataset that has labels
label_column_name=label_column,
# Optional:
# batch_size=1000,
).outputs["predictions"]
tensorflow_vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
model=tensorflow_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
tensorflow_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=tensorflow_vertex_model_name,
).outputs["endpoint_name"]
# PyTorch
pytorch_network = create_fully_connected_pytorch_network_op(
input_size=len(feature_columns),
# Optional:
hidden_layer_sizes=[10],
activation_name="elu",
# output_activation_name=None,
# output_size=1,
).outputs["model"]
pytorch_model = train_pytorch_model_from_csv_op(
model=pytorch_network,
training_data=training_data,
label_column_name=label_column,
# Optional:
#loss_function_name="mse_loss",
#number_of_epochs=1,
#learning_rate=0.1,
#optimizer_name="Adadelta",
#optimizer_parameters={},
#batch_size=32,
#batch_log_interval=100,
#random_seed=0,
).outputs["trained_model"]
pytorch_model_archive = create_pytorch_model_archive_with_base_handler_op(
model=pytorch_model,
# Optional:
# model_name="model",
# model_version="1.0",
).outputs["Model archive"]
pytorch_vertex_model_name = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI_op(
model_archive=pytorch_model_archive,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
pytorch_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=pytorch_vertex_model_name,
).outputs["endpoint_name"]
# XGBoost
xgboost_model = train_XGBoost_model_on_CSV_op(
training_data=training_data,
label_column_name=label_column,
# Optional:
#starting_model=None,
#num_iterations=10,
#booster_params={},
#objective="reg:squarederror",
#booster="gbtree",
#learning_rate=0.3,
#min_split_loss=0,
#max_depth=6,
).outputs["model"]
# Predicting on the testing data
xgboost_predictions = xgboost_predict_on_CSV_op(
data=testing_data,
model=xgboost_model,
# label_column needs to be set when doing prediction on a dataset that has labels
label_column_name=label_column,
).outputs["predictions"]
xgboost_vertex_model_name = upload_XGBoost_model_to_Google_Cloud_Vertex_AI_op(
model=xgboost_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
xgboost_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=xgboost_vertex_model_name,
).outputs["endpoint_name"]
# Scikit-learn
sklearn_model = train_linear_regression_model_using_scikit_learn_from_CSV_op(
dataset=training_data,
label_column_name=label_column,
).outputs["model"]
sklearn_vertex_model_name = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI_op(
model=sklearn_model,
).outputs["model_name"]
# Deploying the model might incur additional costs over time
if deploy_model:
sklearn_vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=sklearn_vertex_model_name,
).outputs["endpoint_name"]
pipeline_func=train_tabular_regression_model_using_all_frameworks_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -2,5 +2,4 @@ cpr_model_server.py
entrypoint.py
state_dict.pth
config.json
**/__pycache__
!testdata/**
**/__pycache__
@@ -2,7 +2,7 @@
## About CPR
CPR ([custom prediction routines](https://github.com/googleapis/python-aiplatform/blob/main/google/cloud/aiplatform/prediction/README.md)) is a framework designed by Google Cloud developers to make it easier to combine machine learning models with custom preprocessing and postprocessing logic in a real-time serving application.
CPR ([custom prediction routines](https://github.com/googleapis/python-aiplatform/blob/custom-prediction-routine/google/cloud/aiplatform/prediction/README.md)) is a framework designed by Google Cloud developers to make it easier to combine machine learning models with custom preprocessing and postprocessing logic in a real-time serving application.
## Using this example
@@ -34,23 +34,6 @@ Finally, install the Python modules required to build and run the model server:
pip install -r requirements.txt
```
### Auth
This example uses Google Cloud Storage for hosting model artifacts and Artifact Registry to store the container image.
You'll need to authorize yourself before you can interact with these.
First, log in to GCP with application default credentials:
```sh
gcloud auth application-default login
```
Next, if you haven't done so already, set up the [gcloud credential helper](https://cloud.google.com/artifact-registry/docs/docker/authentication)
for the Artifact Registry region where you intend to host the image.
```
gcloud auth configure-docker <region>-docker.pkg.dev
```
### Predictor
The `TimmPredictor` class in `timm_serving/predictor.py` implements most of the important logic for the server.
@@ -60,9 +60,9 @@ class CPRConfig(object):
image: str = "timm_predictor:latest"
artifact_local_dir: str = ""
region: str = "us-central1"
project_id: str = "<your project ID here>"
project_id: str = "samthrasher-experimental"
repository: str = "cpr-images"
artifact_gcs_dir: str = "gs://<your bucket ID here>/timm-vit224/"
artifact_gcs_dir: str = "gs://samthrasher-cpr-example/timm-vit224/"
model_name: str = ""
endpoint_name: str = ""
machine_type: str = "n1-standard-2"
@@ -5,4 +5,4 @@ timm==0.5.4
smart_open==6.0.0
google-cloud-storage>=1.26.0,<2.0.0dev
google-cloud-aiplatform[prediction]>=1.16.0
google-cloud-aiplatform[prediction] @ git+https://github.com/googleapis/python-aiplatform.git@custom-prediction-routine
@@ -70,10 +70,7 @@ class PredictorUnitTests(absltest.TestCase):
def setUp(self):
super().setUp()
self.config = CPRConfig()
try:
self.config.load()
except FileNotFoundError:
logging.info("No saved config file found, using default values.")
self.config.load()
self.predictor = predictor.TimmPredictor()
def test_load_from_saved_state_dict_ok(self):
@@ -173,10 +170,7 @@ class ServerEndToEndTests(absltest.TestCase):
def setUp(self):
super().setUp()
self.config = CPRConfig()
try:
self.config.load()
except FileNotFoundError:
logging.info("No saved config file found, using default values.")
self.config.load()
self.local_model = cpr.LocalModel(
serving_container_spec=aiplatform.gapic.ModelContainerSpec(
image_uri=self.config.image
@@ -1 +0,0 @@
blah
@@ -1,64 +0,0 @@
name: Train linear regression model using scikit learn from CSV
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/ML_frameworks/Scikit_learn/Train_linear_regression_model/from_CSV/component.yaml'}
inputs:
- {name: dataset, type: CSV}
- {name: label_column_name, type: String}
outputs:
- {name: model, type: ScikitLearnPickleModel}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'scikit-learn==1.0.2' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'scikit-learn==1.0.2' 'pandas==1.4.3'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_linear_regression_model_using_scikit_learn_from_CSV(
dataset_path,
model_path,
label_column_name,
):
import pandas
import pickle
from sklearn import linear_model
df = pandas.read_csv(dataset_path)
model = linear_model.LinearRegression()
model.fit(
X=df.drop(columns=label_column_name),
y=df[label_column_name],
)
with open(model_path, "wb") as f:
pickle.dump(model, f)
import argparse
_parser = argparse.ArgumentParser(prog='Train linear regression model using scikit learn from CSV', description='')
_parser.add_argument("--dataset", dest="dataset_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = train_linear_regression_model_using_scikit_learn_from_CSV(**_parsed_args)
args:
- --dataset
- {inputPath: dataset}
- --label-column-name
- {inputValue: label_column_name}
- --model
- {outputPath: model}
@@ -1,163 +0,0 @@
name: Train logistic regression model using scikit learn from CSV
description: Train logistic regression model using Scikit-learn
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/ML_frameworks/Scikit_learn/Train_logistic_regression_model/from_CSV/component.yaml'}
inputs:
- {name: dataset, type: CSV}
- {name: label_column_name, type: String}
- {name: penalty, type: String, default: l2, optional: true}
- {name: solver, type: String, default: lbfgs, optional: true}
- {name: max_iterations, type: Integer, default: '100', optional: true}
- {name: multi_class_mode, type: String, default: auto, optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: model, type: ScikitLearnPickleModel}
- {name: model_parameters, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'scikit-learn==1.0.2' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'scikit-learn==1.0.2' 'pandas==1.4.3'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_logistic_regression_model_using_scikit_learn_from_CSV(
dataset_path,
model_path,
label_column_name,
penalty = "l2", # l1, l2, elasticnet, none
solver = "lbfgs", # newton-cg, lbfgs, liblinear, sag, saga
max_iterations = 100,
multi_class_mode = "auto", # auto, ovr, multinomial
random_seed = 0,
):
"""Train logistic regression model using Scikit-learn
See https://scikit-learn.org/stable/modules/generated/sklearn.linear_model.LogisticRegression.html
"""
import json
import pandas
import pickle
from sklearn import linear_model
df = pandas.read_csv(dataset_path)
model = linear_model.LogisticRegression(
penalty=penalty,
#dual=False,
#tol=1e-4,
#C=1.0,
#fit_intercept=True,
#intercept_scaling=1,
#class_weight=None,
random_state=random_seed,
solver=solver,
max_iter=max_iterations,
multi_class=multi_class_mode,
#l1_ratio=None,
verbose=1,
)
model_parameters = model.get_params()
model_parameters_json = json.dumps(model_parameters, indent=2)
print("Model parameters:")
print(model_parameters_json)
print()
model.fit(
X=df.drop(columns=label_column_name),
y=df[label_column_name],
)
with open(model_path, "wb") as f:
pickle.dump(model, f)
return (model_parameters_json,)
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
import argparse
_parser = argparse.ArgumentParser(prog='Train logistic regression model using scikit learn from CSV', description='Train logistic regression model using Scikit-learn')
_parser.add_argument("--dataset", dest="dataset_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--penalty", dest="penalty", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--solver", dest="solver", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--max-iterations", dest="max_iterations", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--multi-class-mode", dest="multi_class_mode", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=1)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = train_logistic_regression_model_using_scikit_learn_from_CSV(**_parsed_args)
_output_serializers = [
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --dataset
- {inputPath: dataset}
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: penalty}
then:
- --penalty
- {inputValue: penalty}
- if:
cond: {isPresent: solver}
then:
- --solver
- {inputValue: solver}
- if:
cond: {isPresent: max_iterations}
then:
- --max-iterations
- {inputValue: max_iterations}
- if:
cond: {isPresent: multi_class_mode}
then:
- --multi-class-mode
- {inputValue: multi_class_mode}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --model
- {outputPath: model}
- '----output-paths'
- {outputPath: model_parameters}
@@ -1,41 +0,0 @@
name: Create PyTorch Model Archive with base handler
inputs:
- {name: Model, type: PyTorchScriptModule}
- {name: Model name, type: String, default: model}
- {name: Model version, type: String, default: "1.0"}
outputs:
- {name: Model archive, type: PyTorchModelArchive}
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/PyTorch/Create_PyTorch_Model_Archive/with_base_handler/component.yaml'
implementation:
container:
image: pytorch/torchserve:0.6.0-cpu
command:
- bash
- -exc
- |
model_path=$0
model_name=$1
model_version=$2
output_model_archive_path=$3
mkdir -p "$(dirname "$output_model_archive_path")"
# TODO: Use the built-in base_handler once my fix is merged: https://github.com/pytorch/serve/pull/1682
echo '
from ts.torch_handler import base_handler
class BaseHandler(base_handler.BaseHandler):
pass
' > base_handler.py # torch-model-archiver needs the handler to have .py extension
torch-model-archiver --model-name "$model_name" --version "$model_version" --serialized-file "$model_path" --handler base_handler.py
# torch-model-archiver does not allow specifying the output path, but always writes to "${model_name}.<format>"
expected_model_archive_path="${model_name}.mar"
mv "$expected_model_archive_path" "$output_model_archive_path"
- {inputPath: Model}
- {inputValue: Model name}
- {inputValue: Model version}
- {outputPath: Model archive}
@@ -1,117 +0,0 @@
name: Create fully connected pytorch network
description: Creates fully-connected network in PyTorch ScriptModule format
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/PyTorch/Create_fully_connected_network/component.yaml'}
inputs:
- {name: input_size, type: Integer}
- {name: hidden_layer_sizes, type: JsonArray, default: '[]', optional: true}
- {name: output_size, type: Integer, default: '1', optional: true}
- {name: activation_name, type: String, default: relu, optional: true}
- {name: output_activation_name, type: String, optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: model, type: PyTorchScriptModule}
implementation:
container:
image: pytorch/pytorch:1.7.1-cuda11.0-cudnn8-runtime
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def create_fully_connected_pytorch_network(
input_size,
model_path,
hidden_layer_sizes = [],
output_size = 1,
activation_name = 'relu',
output_activation_name = None,
random_seed = 0,
):
'''Creates fully-connected network in PyTorch ScriptModule format'''
import torch
torch.manual_seed(random_seed)
activation = getattr(torch, activation_name, None) or getattr(torch.nn.functional, activation_name, None)
if not activation:
raise ValueError(f'Activation "{activation_name}" was not found.')
class ActivationLayer(torch.nn.Module):
def forward(self, input):
return activation(input)
layers = []
prev_layer_size = input_size
for layer_size in hidden_layer_sizes:
layer = torch.nn.Linear(prev_layer_size, layer_size)
prev_layer_size = layer_size
layers.append(layer)
layers.append(ActivationLayer())
# Adding the output layer
layers.append(torch.nn.Linear(prev_layer_size, output_size))
# Adding the optional activation after the output layer
if output_activation_name:
output_activation = getattr(torch, output_activation_name, None) or getattr(torch.nn.functional, output_activation_name, None)
class OutputActivationLayer(torch.nn.Module):
def forward(self, input):
return output_activation(input)
layers.append(OutputActivationLayer())
network = torch.nn.Sequential(*layers)
script_module = torch.jit.script(network)
print(script_module)
script_module.save(model_path)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Create fully connected pytorch network', description='Creates fully-connected network in PyTorch ScriptModule format')
_parser.add_argument("--input-size", dest="input_size", type=int, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--hidden-layer-sizes", dest="hidden_layer_sizes", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--output-size", dest="output_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--activation-name", dest="activation_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--output-activation-name", dest="output_activation_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = create_fully_connected_pytorch_network(**_parsed_args)
args:
- --input-size
- {inputValue: input_size}
- if:
cond: {isPresent: hidden_layer_sizes}
then:
- --hidden-layer-sizes
- {inputValue: hidden_layer_sizes}
- if:
cond: {isPresent: output_size}
then:
- --output-size
- {inputValue: output_size}
- if:
cond: {isPresent: activation_name}
then:
- --activation-name
- {inputValue: activation_name}
- if:
cond: {isPresent: output_activation_name}
then:
- --output-activation-name
- {inputValue: output_activation_name}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --model
- {outputPath: model}
@@ -1,209 +0,0 @@
name: Train pytorch model from csv
description: Trains PyTorch model
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/PyTorch/Train_PyTorch_model/from_CSV/component.yaml'
inputs:
- {name: model, type: PyTorchScriptModule}
- {name: training_data, type: CSV}
- {name: label_column_name, type: String}
- {name: loss_function_name, type: String, default: mse_loss, optional: true}
- {name: number_of_epochs, type: Integer, default: '1', optional: true}
- {name: learning_rate, type: Float, default: '0.1', optional: true}
- {name: optimizer_name, type: String, default: Adadelta, optional: true}
- {name: optimizer_parameters, type: JsonObject, optional: true}
- {name: batch_size, type: Integer, default: '32', optional: true}
- {name: batch_log_interval, type: Integer, default: '100', optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: trained_model, type: PyTorchScriptModule}
implementation:
container:
image: pytorch/pytorch:1.7.1-cuda11.0-cudnn8-runtime
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
--no-warn-script-location 'pandas==1.4.3' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_pytorch_model_from_csv(
model_path,
training_data_path,
trained_model_path,
label_column_name,
loss_function_name = 'mse_loss',
number_of_epochs = 1,
learning_rate = 0.1,
optimizer_name = 'Adadelta',
optimizer_parameters = None,
batch_size = 32,
batch_log_interval = 100,
random_seed = 0,
):
'''Trains PyTorch model'''
import pandas
import torch
torch.manual_seed(random_seed)
use_cuda = torch.cuda.is_available()
device = torch.device("cuda" if use_cuda else "cpu")
model = torch.jit.load(model_path)
model.to(device)
model.train()
optimizer_class = getattr(torch.optim, optimizer_name, None)
if not optimizer_class:
raise ValueError(f'Optimizer "{optimizer_name}" was not found.')
optimizer_parameters = optimizer_parameters or {}
optimizer_parameters['lr'] = learning_rate
optimizer = optimizer_class(model.parameters(), **optimizer_parameters)
loss_function = getattr(torch, loss_function_name, None) or getattr(torch.nn, loss_function_name, None) or getattr(torch.nn.functional, loss_function_name, None)
if not loss_function:
raise ValueError(f'Loss function "{loss_function_name}" was not found.')
class CsvDataset(torch.utils.data.Dataset):
def __init__(self, file_path, label_column_name, drop_nan_columns_or_rows = 'columns'):
dataframe = pandas.read_csv(file_path).convert_dtypes()
# Preventing error: default_collate: batch must contain tensors, numpy arrays, numbers, dicts or lists; found object
if drop_nan_columns_or_rows == 'columns':
non_nan_data = dataframe.dropna(axis='columns')
removed_columns = set(dataframe.columns) - set(non_nan_data.columns)
if removed_columns:
print('Skipping columns with NaNs: ' + str(removed_columns))
dataframe = non_nan_data
if drop_nan_columns_or_rows == 'rows':
non_nan_data = dataframe.dropna(axis='index')
number_of_removed_rows = len(dataframe) - len(non_nan_data)
if number_of_removed_rows:
print(f'Skipped {number_of_removed_rows} rows with NaNs.')
dataframe = non_nan_data
numerical_data = dataframe.select_dtypes(include='number')
non_numerical_data = dataframe.select_dtypes(exclude='number')
if not non_numerical_data.empty:
print('Skipping non-number columns:')
print(non_numerical_data.dtypes)
self._dataframe = dataframe
self.labels = numerical_data[[label_column_name]]
self.features = numerical_data.drop(columns=[label_column_name])
def __len__(self):
return len(self._dataframe)
def __getitem__(self, index):
return [self.features.loc[index].to_numpy(dtype='float32'), self.labels.loc[index].to_numpy(dtype='float32')]
dataset = CsvDataset(
file_path=training_data_path,
label_column_name=label_column_name,
)
train_loader = torch.utils.data.DataLoader(
dataset=dataset,
batch_size=batch_size,
shuffle=True,
)
last_full_batch_loss = None
for epoch in range(1, number_of_epochs + 1):
for batch_idx, (data, target) in enumerate(train_loader):
data, target = data.to(device), target.to(device)
optimizer.zero_grad()
output = model(data)
loss = loss_function(output, target)
loss.backward()
optimizer.step()
if len(data) == batch_size:
last_full_batch_loss = loss.item()
if batch_idx % batch_log_interval == 0:
print('Train Epoch: {} [{}/{} ({:.0f}%)]\tLoss: {:.6f}'.format(
epoch, batch_idx * len(data), len(train_loader.dataset),
100. * batch_idx / len(train_loader), loss.item()))
print(f'Training epoch {epoch} completed. Last full batch loss: {last_full_batch_loss:.6f}')
# print(optimizer.state_dict())
model.save(trained_model_path)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Train pytorch model from csv', description='Trains PyTorch model')
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--training-data", dest="training_data_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--loss-function-name", dest="loss_function_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--number-of-epochs", dest="number_of_epochs", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--learning-rate", dest="learning_rate", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--optimizer-name", dest="optimizer_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--optimizer-parameters", dest="optimizer_parameters", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--batch-size", dest="batch_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--batch-log-interval", dest="batch_log_interval", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--trained-model", dest="trained_model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = train_pytorch_model_from_csv(**_parsed_args)
args:
- --model
- {inputPath: model}
- --training-data
- {inputPath: training_data}
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: loss_function_name}
then:
- --loss-function-name
- {inputValue: loss_function_name}
- if:
cond: {isPresent: number_of_epochs}
then:
- --number-of-epochs
- {inputValue: number_of_epochs}
- if:
cond: {isPresent: learning_rate}
then:
- --learning-rate
- {inputValue: learning_rate}
- if:
cond: {isPresent: optimizer_name}
then:
- --optimizer-name
- {inputValue: optimizer_name}
- if:
cond: {isPresent: optimizer_parameters}
then:
- --optimizer-parameters
- {inputValue: optimizer_parameters}
- if:
cond: {isPresent: batch_size}
then:
- --batch-size
- {inputValue: batch_size}
- if:
cond: {isPresent: batch_log_interval}
then:
- --batch-log-interval
- {inputValue: batch_log_interval}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --trained-model
- {outputPath: trained_model}
@@ -1,110 +0,0 @@
name: Xgboost predict on CSV
description: Makes predictions using a trained XGBoost model.
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/XGBoost/Predict/component.yaml'}
inputs:
- {name: data, type: CSV, description: Feature data in Apache Parquet format.}
- {name: model, type: XGBoostModel, description: Trained model in binary XGBoost format.}
- {name: label_column_name, type: String, description: Optional. Name of the column
containing the label data that is excluded during the prediction., optional: true}
outputs:
- {name: predictions, description: Model predictions.}
implementation:
container:
image: python:3.10
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'xgboost==1.6.1' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'xgboost==1.6.1' 'pandas==1.4.3'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def xgboost_predict_on_CSV(
data_path,
model_path,
predictions_path,
label_column_name = None,
):
"""Makes predictions using a trained XGBoost model.
Args:
data_path: Feature data in Apache Parquet format.
model_path: Trained model in binary XGBoost format.
predictions_path: Model predictions.
label_column_name: Optional. Name of the column containing the label data that is excluded during the prediction.
Annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
"""
from pathlib import Path
import numpy
import pandas
import xgboost
df = pandas.read_csv(
data_path,
).convert_dtypes()
print("Evaluation data information:")
df.info(verbose=True)
# Converting column types that XGBoost does not support
for column_name, dtype in df.dtypes.items():
if dtype in ["string", "object"]:
print(f"Treating the {dtype.name} column '{column_name}' as categorical.")
df[column_name] = df[column_name].astype("category")
print(f"Inferred {len(df[column_name].cat.categories)} categories for the '{column_name}' column.")
# Working around the XGBoost issue with nullable floats: https://github.com/dmlc/xgboost/issues/8213
if pandas.api.types.is_float_dtype(dtype):
# Converting from "Float64" to "float64"
df[column_name] = df[column_name].astype(dtype.name.lower())
print("Final evaluation data information:")
df.info(verbose=True)
if label_column_name is not None:
df = df.drop(columns=[label_column_name])
testing_data = xgboost.DMatrix(
data=df,
enable_categorical=True,
)
model = xgboost.Booster(model_file=model_path)
predictions = model.predict(testing_data)
Path(predictions_path).parent.mkdir(parents=True, exist_ok=True)
numpy.savetxt(predictions_path, predictions)
import argparse
_parser = argparse.ArgumentParser(prog='Xgboost predict on CSV', description='Makes predictions using a trained XGBoost model.')
_parser.add_argument("--data", dest="data_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--predictions", dest="predictions_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = xgboost_predict_on_CSV(**_parsed_args)
args:
- --data
- {inputPath: data}
- --model
- {inputPath: model}
- if:
cond: {isPresent: label_column_name}
then:
- --label-column-name
- {inputValue: label_column_name}
- --predictions
- {outputPath: predictions}
@@ -1,241 +0,0 @@
name: Train XGBoost model on CSV
description: Trains an XGBoost model.
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/XGBoost/Train/component.yaml'}
inputs:
- {name: training_data, type: CSV, description: Training data in CSV format.}
- {name: label_column_name, type: String, description: Name of the column containing
the label data.}
- {name: starting_model, type: XGBoostModel, description: Existing trained model to
start from (in the binary XGBoost format)., optional: true}
- {name: num_iterations, type: Integer, description: Number of boosting iterations.,
default: '10', optional: true}
- name: objective
type: String
description: |-
The learning task and the corresponding learning objective.
See https://xgboost.readthedocs.io/en/latest/parameter.html#learning-task-parameters
The most common values are:
"reg:squarederror" - Regression with squared loss (default).
"reg:logistic" - Logistic regression.
"binary:logistic" - Logistic regression for binary classification, output probability.
"binary:logitraw" - Logistic regression for binary classification, output score before logistic transformation
"rank:pairwise" - Use LambdaMART to perform pairwise ranking where the pairwise loss is minimized
"rank:ndcg" - Use LambdaMART to perform list-wise ranking where Normalized Discounted Cumulative Gain (NDCG) is maximized
default: reg:squarederror
optional: true
- {name: booster, type: String, description: 'The booster to use. Can be `gbtree`,
`gblinear` or `dart`; `gbtree` and `dart` use tree based models while `gblinear`
uses linear functions.', default: gbtree, optional: true}
- {name: learning_rate, type: Float, description: 'Step size shrinkage used in update
to prevents overfitting. Range: [0,1].', default: '0.3', optional: true}
- name: min_split_loss
type: Float
description: |-
Minimum loss reduction required to make a further partition on a leaf node of the tree.
The larger `min_split_loss` is, the more conservative the algorithm will be. Range: [0,Inf].
default: '0'
optional: true
- name: max_depth
type: Integer
description: |-
Maximum depth of a tree. Increasing this value will make the model more complex and more likely to overfit.
0 indicates no limit on depth. Range: [0,Inf].
default: '6'
optional: true
- {name: booster_params, type: JsonObject, description: 'Parameters for the booster.
See https://xgboost.readthedocs.io/en/latest/parameter.html', optional: true}
outputs:
- {name: model, type: XGBoostModel, description: Trained model in the binary XGBoost
format.}
- {name: model_config, type: XGBoostModelConfig, description: The internal parameter
configuration of Booster as a JSON string.}
implementation:
container:
image: python:3.10
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'xgboost==1.6.1' 'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'xgboost==1.6.1' 'pandas==1.4.3'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_XGBoost_model_on_CSV(
training_data_path,
model_path,
model_config_path,
label_column_name,
starting_model_path = None,
num_iterations = 10,
# Booster parameters
objective = "reg:squarederror",
booster = "gbtree",
learning_rate = 0.3,
min_split_loss = 0,
max_depth = 6,
booster_params = None,
):
"""Trains an XGBoost model.
Args:
training_data_path: Training data in CSV format.
model_path: Trained model in the binary XGBoost format.
model_config_path: The internal parameter configuration of Booster as a JSON string.
starting_model_path: Existing trained model to start from (in the binary XGBoost format).
label_column_name: Name of the column containing the label data.
num_iterations: Number of boosting iterations.
booster_params: Parameters for the booster. See https://xgboost.readthedocs.io/en/latest/parameter.html
objective: The learning task and the corresponding learning objective.
See https://xgboost.readthedocs.io/en/latest/parameter.html#learning-task-parameters
The most common values are:
"reg:squarederror" - Regression with squared loss (default).
"reg:logistic" - Logistic regression.
"binary:logistic" - Logistic regression for binary classification, output probability.
"binary:logitraw" - Logistic regression for binary classification, output score before logistic transformation
"rank:pairwise" - Use LambdaMART to perform pairwise ranking where the pairwise loss is minimized
"rank:ndcg" - Use LambdaMART to perform list-wise ranking where Normalized Discounted Cumulative Gain (NDCG) is maximized
booster: The booster to use. Can be `gbtree`, `gblinear` or `dart`; `gbtree` and `dart` use tree based models while `gblinear` uses linear functions.
learning_rate: Step size shrinkage used in update to prevents overfitting. Range: [0,1].
min_split_loss: Minimum loss reduction required to make a further partition on a leaf node of the tree.
The larger `min_split_loss` is, the more conservative the algorithm will be. Range: [0,Inf].
max_depth: Maximum depth of a tree. Increasing this value will make the model more complex and more likely to overfit.
0 indicates no limit on depth. Range: [0,Inf].
Annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
"""
import pandas
import xgboost
df = pandas.read_csv(
training_data_path,
).convert_dtypes()
print("Training data information:")
df.info(verbose=True)
# Converting column types that XGBoost does not support
for column_name, dtype in df.dtypes.items():
if dtype in ["string", "object"]:
print(f"Treating the {dtype.name} column '{column_name}' as categorical.")
df[column_name] = df[column_name].astype("category")
print(f"Inferred {len(df[column_name].cat.categories)} categories for the '{column_name}' column.")
# Working around the XGBoost issue with nullable floats: https://github.com/dmlc/xgboost/issues/8213
if pandas.api.types.is_float_dtype(dtype):
# Converting from "Float64" to "float64"
df[column_name] = df[column_name].astype(dtype.name.lower())
print()
print("Final training data information:")
df.info(verbose=True)
training_data = xgboost.DMatrix(
data=df.drop(columns=[label_column_name]),
label=df[[label_column_name]],
enable_categorical=True,
)
booster_params = booster_params or {}
booster_params.setdefault("objective", objective)
booster_params.setdefault("booster", booster)
booster_params.setdefault("learning_rate", learning_rate)
booster_params.setdefault("min_split_loss", min_split_loss)
booster_params.setdefault("max_depth", max_depth)
starting_model = None
if starting_model_path:
starting_model = xgboost.Booster(model_file=starting_model_path)
print()
print("Training the model:")
model = xgboost.train(
params=booster_params,
dtrain=training_data,
num_boost_round=num_iterations,
xgb_model=starting_model,
evals=[(training_data, "training_data")],
)
# Saving the model in binary format
model.save_model(model_path)
model_config_str = model.save_config()
with open(model_config_path, "w") as model_config_file:
model_config_file.write(model_config_str)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Train XGBoost model on CSV', description='Trains an XGBoost model.')
_parser.add_argument("--training-data", dest="training_data_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--starting-model", dest="starting_model_path", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--num-iterations", dest="num_iterations", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--objective", dest="objective", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--booster", dest="booster", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--learning-rate", dest="learning_rate", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--min-split-loss", dest="min_split_loss", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--max-depth", dest="max_depth", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--booster-params", dest="booster_params", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model-config", dest="model_config_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = train_XGBoost_model_on_CSV(**_parsed_args)
args:
- --training-data
- {inputPath: training_data}
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: starting_model}
then:
- --starting-model
- {inputPath: starting_model}
- if:
cond: {isPresent: num_iterations}
then:
- --num-iterations
- {inputValue: num_iterations}
- if:
cond: {isPresent: objective}
then:
- --objective
- {inputValue: objective}
- if:
cond: {isPresent: booster}
then:
- --booster
- {inputValue: booster}
- if:
cond: {isPresent: learning_rate}
then:
- --learning-rate
- {inputValue: learning_rate}
- if:
cond: {isPresent: min_split_loss}
then:
- --min-split-loss
- {inputValue: min_split_loss}
- if:
cond: {isPresent: max_depth}
then:
- --max-depth
- {inputValue: max_depth}
- if:
cond: {isPresent: booster_params}
then:
- --booster-params
- {inputValue: booster_params}
- --model
- {outputPath: model}
- --model-config
- {outputPath: model_config}
@@ -1,204 +0,0 @@
name: Split rows into subsets
description: Splits the data table according to the split fractions.
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/dataset_manipulation/Split_rows_into_subsets/in_CSV/component.yaml'}
inputs:
- {name: table, type: CSV}
- {name: fraction_1, type: Float, description: 'The proportion of the lines to put
into the 1st split. Range: [0, 1]'}
- name: fraction_2
type: Float
description: |-
The proportion of the lines to put into the 2nd split. Range: [0, 1]
If fraction_2 is not specified, then fraction_2 = 1 - fraction_1.
The remaining lines go to the 3rd split (if any).
optional: true
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: split_1, type: CSV}
- {name: split_2, type: CSV}
- {name: split_3, type: CSV}
- {name: split_1_count, type: Integer}
- {name: split_2_count, type: Integer}
- {name: split_3_count, type: Integer}
implementation:
container:
image: python:3.9
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def split_rows_into_subsets(
table_path,
split_1_path,
split_2_path,
split_3_path,
fraction_1,
fraction_2 = None,
random_seed = 0,
):
"""Splits the data table according to the split fractions.
Args:
fraction_1: The proportion of the lines to put into the 1st split. Range: [0, 1]
fraction_2: The proportion of the lines to put into the 2nd split. Range: [0, 1]
If fraction_2 is not specified, then fraction_2 = 1 - fraction_1.
The remaining lines go to the 3rd split (if any).
"""
import random
random.seed(random_seed)
SHUFFLE_BUFFER_SIZE = 10000
num_splits = 3
if fraction_1 < 0 or fraction_1 > 1:
raise ValueError("fraction_1 must be in between 0 and 1.")
if fraction_2 is None:
fraction_2 = 1 - fraction_1
if fraction_2 < 0 or fraction_2 > 1:
raise ValueError("fraction_2 must be in between 0 and 1.")
fraction_3 = 1 - fraction_1 - fraction_2
fractions = [
fraction_1,
fraction_2,
fraction_3,
]
assert sum(fractions) == 1
written_line_counts = [0] * num_splits
output_files = [
open(split_1_path, "wb"),
open(split_2_path, "wb"),
open(split_3_path, "wb"),
]
with open(table_path, "rb") as input_file:
# Writing the headers
header_line = input_file.readline()
for output_file in output_files:
output_file.write(header_line)
while True:
line_buffer = []
for i in range(SHUFFLE_BUFFER_SIZE):
line = input_file.readline()
if not line:
break
line_buffer.append(line)
# We need to exactly partition the lines between the output files
# To overcome possible systematic bias, we could calculate the total numbers
# of lines written to each file and take that into account.
num_read_lines = len(line_buffer)
number_of_lines_for_files = [0] * num_splits
# List that will have the index of the destination file for each line
file_index_for_line = []
remaining_lines = num_read_lines
remaining_fraction = 1
for i in range(num_splits):
number_of_lines_for_file = (
round(remaining_lines * (fractions[i] / remaining_fraction))
if remaining_fraction > 0
else 0
)
number_of_lines_for_files[i] = number_of_lines_for_file
remaining_lines -= number_of_lines_for_file
remaining_fraction -= fractions[i]
file_index_for_line.extend([i] * number_of_lines_for_file)
assert remaining_lines == 0, f"{remaining_lines}"
assert len(file_index_for_line) == num_read_lines
random.shuffle(file_index_for_line)
for i in range(num_read_lines):
output_files[file_index_for_line[i]].write(line_buffer[i])
written_line_counts[file_index_for_line[i]] += 1
# Exit if the file ended before we were able to fully fill the buffer
if len(line_buffer) != SHUFFLE_BUFFER_SIZE:
break
for output_file in output_files:
output_file.close()
return written_line_counts
def _serialize_int(int_value: int) -> str:
if isinstance(int_value, str):
return int_value
if not isinstance(int_value, int):
raise TypeError('Value "{}" has type "{}" instead of int.'.format(str(int_value), str(type(int_value))))
return str(int_value)
import argparse
_parser = argparse.ArgumentParser(prog='Split rows into subsets', description='Splits the data table according to the split fractions.')
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--fraction-1", dest="fraction_1", type=float, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--fraction-2", dest="fraction_2", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--split-1", dest="split_1_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--split-2", dest="split_2_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--split-3", dest="split_3_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=3)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = split_rows_into_subsets(**_parsed_args)
_output_serializers = [
_serialize_int,
_serialize_int,
_serialize_int,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --table
- {inputPath: table}
- --fraction-1
- {inputValue: fraction_1}
- if:
cond: {isPresent: fraction_2}
then:
- --fraction-2
- {inputValue: fraction_2}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --split-1
- {outputPath: split_1}
- --split-2
- {outputPath: split_2}
- --split-3
- {outputPath: split_3}
- '----output-paths'
- {outputPath: split_1_count}
- {outputPath: split_2_count}
- {outputPath: split_3_count}
@@ -1,241 +0,0 @@
name: Deploy model to endpoint for Google Cloud Vertex AI Model
description: Deploys Google Cloud Vertex AI Model to a Google Cloud Vertex AI Endpoint.
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model_name, type: String, description: Full resource name of a Google Cloud
Vertex AI Model}
- name: endpoint_name
type: String
description: |-
Optional. Full name of Google Cloud Vertex Endpoint. A new
endpoint is created if the name is not passed.
optional: true
- name: machine_type
type: String
description: |-
The type of the machine. See the [list of machine types
supported for prediction
](https://cloud.google.com/vertex-ai/docs/predictions/configure-compute#machine-types).
Defaults to "n1-standard-2"
default: n1-standard-2
optional: true
- name: min_replica_count
type: Integer
description: |-
Optional. The minimum number of machine replicas this deployed
model will be always deployed on. If traffic against it increases,
it may dynamically be deployed onto more replicas, and as traffic
decreases, some of these extra replicas may be freed.
default: '1'
optional: true
- name: max_replica_count
type: Integer
description: |-
Optional. The maximum number of replicas this deployed model may
be deployed on when the traffic against it increases. If requested
value is too large, the deployment will error, but if deployment
succeeds then the ability to scale the model to that many replicas
is guaranteed (barring service outages). If traffic against the
deployed model increases beyond what its replicas at maximum may
handle, a portion of the traffic will be dropped. If this value
is not provided, the smaller value of min_replica_count or 1 will
be used.
default: '1'
optional: true
- name: accelerator_type
type: String
description: |-
Optional. Hardware accelerator type. Must also set accelerator_count if used.
One of ACCELERATOR_TYPE_UNSPECIFIED, NVIDIA_TESLA_K80, NVIDIA_TESLA_P100,
NVIDIA_TESLA_V100, NVIDIA_TESLA_P4, NVIDIA_TESLA_T4
optional: true
- {name: accelerator_count, type: Integer, description: Optional. The number of accelerators
to attach to a worker replica., optional: true}
outputs:
- {name: endpoint_name, type: String}
- {name: endpoint_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.7.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.7.0'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def deploy_model_to_endpoint_for_Google_Cloud_Vertex_AI_Model(
model_name,
endpoint_name = None,
machine_type = "n1-standard-2",
min_replica_count = 1,
max_replica_count = 1,
accelerator_type = None,
accelerator_count = None,
#
# Uncomment when anyone requests these:
# deployed_model_display_name: str = None,
# traffic_percentage: int = 0,
# traffic_split: dict = None,
# service_account: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
#
# encryption_spec_key_name: str = None,
):
"""Deploys Google Cloud Vertex AI Model to a Google Cloud Vertex AI Endpoint.
Args:
model_name: Full resource name of a Google Cloud Vertex AI Model
endpoint_name: Optional. Full name of Google Cloud Vertex Endpoint. A new
endpoint is created if the name is not passed.
machine_type: The type of the machine. See the [list of machine types
supported for prediction
](https://cloud.google.com/vertex-ai/docs/predictions/configure-compute#machine-types).
Defaults to "n1-standard-2"
min_replica_count (int):
Optional. The minimum number of machine replicas this deployed
model will be always deployed on. If traffic against it increases,
it may dynamically be deployed onto more replicas, and as traffic
decreases, some of these extra replicas may be freed.
max_replica_count (int):
Optional. The maximum number of replicas this deployed model may
be deployed on when the traffic against it increases. If requested
value is too large, the deployment will error, but if deployment
succeeds then the ability to scale the model to that many replicas
is guaranteed (barring service outages). If traffic against the
deployed model increases beyond what its replicas at maximum may
handle, a portion of the traffic will be dropped. If this value
is not provided, the smaller value of min_replica_count or 1 will
be used.
accelerator_type (str):
Optional. Hardware accelerator type. Must also set accelerator_count if used.
One of ACCELERATOR_TYPE_UNSPECIFIED, NVIDIA_TESLA_K80, NVIDIA_TESLA_P100,
NVIDIA_TESLA_V100, NVIDIA_TESLA_P4, NVIDIA_TESLA_T4
accelerator_count (int):
Optional. The number of accelerators to attach to a worker replica.
"""
import json
from google.cloud import aiplatform
model = aiplatform.Model(model_name=model_name)
if endpoint_name:
endpoint = aiplatform.Endpoint(endpoint_name=endpoint_name)
else:
endpoint_display_name = model.display_name[:118] + "_endpoint"
endpoint = aiplatform.Endpoint.create(
display_name=endpoint_display_name,
project=model.project,
location=model.location,
# encryption_spec_key_name=encryption_spec_key_name,
labels={"component-source": "github-com-ark-kun-pipeline-components"},
)
endpoint = model.deploy(
endpoint=endpoint,
# deployed_model_display_name=deployed_model_display_name,
machine_type=machine_type,
min_replica_count=min_replica_count,
max_replica_count=max_replica_count,
accelerator_type=accelerator_type,
accelerator_count=accelerator_count,
# service_account=service_account,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
# encryption_spec_key_name=encryption_spec_key_name,
)
endpoint_json = json.dumps(endpoint.to_dict(), indent=2)
print(endpoint_json)
return (endpoint.resource_name, endpoint_json)
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import argparse
_parser = argparse.ArgumentParser(prog='Deploy model to endpoint for Google Cloud Vertex AI Model', description='Deploys Google Cloud Vertex AI Model to a Google Cloud Vertex AI Endpoint.')
_parser.add_argument("--model-name", dest="model_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--endpoint-name", dest="endpoint_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--machine-type", dest="machine_type", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--min-replica-count", dest="min_replica_count", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--max-replica-count", dest="max_replica_count", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--accelerator-type", dest="accelerator_type", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--accelerator-count", dest="accelerator_count", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = deploy_model_to_endpoint_for_Google_Cloud_Vertex_AI_Model(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model-name
- {inputValue: model_name}
- if:
cond: {isPresent: endpoint_name}
then:
- --endpoint-name
- {inputValue: endpoint_name}
- if:
cond: {isPresent: machine_type}
then:
- --machine-type
- {inputValue: machine_type}
- if:
cond: {isPresent: min_replica_count}
then:
- --min-replica-count
- {inputValue: min_replica_count}
- if:
cond: {isPresent: max_replica_count}
then:
- --max-replica-count
- {inputValue: max_replica_count}
- if:
cond: {isPresent: accelerator_type}
then:
- --accelerator-type
- {inputValue: accelerator_type}
- if:
cond: {isPresent: accelerator_count}
then:
- --accelerator-count
- {inputValue: accelerator_count}
- '----output-paths'
- {outputPath: endpoint_name}
- {outputPath: endpoint_dict}
@@ -1,297 +0,0 @@
name: Upload PyTorch model archive to Google Cloud Vertex AI
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Upload_PyTorch_model_archive/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model_archive, type: PyTorchModelArchive}
- {name: torchserve_version, type: String, default: 0.6.0, optional: true}
- name: use_gpu
type: Boolean
default: "False"
optional: true
- {name: display_name, type: String, optional: true}
- {name: description, type: String, optional: true}
- {name: project, type: String, optional: true}
- {name: location, type: String, optional: true}
- {name: labels, type: JsonObject, optional: true}
- {name: staging_bucket, type: String, optional: true}
outputs:
- {name: model_name, type: String}
- {name: model_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.13.1' 'google-cloud-build==3.8.3' || PIP_DISABLE_PIP_VERSION_CHECK=1
python3 -m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.13.1'
'google-cloud-build==3.8.3' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI(
model_archive_path,
torchserve_version = "0.6.0",
use_gpu = False,
display_name = None,
description = None,
# Uncomment when anyone requests these:
# instance_schema_uri: str = None,
# parameters_schema_uri: str = None,
# prediction_schema_uri: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
project = None,
location = None,
labels = None,
# encryption_spec_key_name: str = None,
staging_bucket = None,
):
import json
import os
from google.cloud import aiplatform
if not location:
location = os.environ.get("CLOUD_ML_REGION")
if not labels:
labels = {}
labels["component-source"] = "github-com-ark-kun-pipeline-components"
container_image_tag = torchserve_version + "-" + ("gpu" if use_gpu else "cpu")
container_image_uri = f"pytorch/torchserve:{container_image_tag}"
# Vertex Endpoints refuse to support non-Google container registries.
# We have to work around this to reduce user frustration
# TODO: Remove this code when Vertex Endpoints service starts supporting other container registries.
def copy_container_image(
src_container_image_uri,
dst_container_image_uri,
project_id,
):
from google.cloud.devtools import cloudbuild
from google import protobuf
build_client = cloudbuild.CloudBuildClient()
build_config = cloudbuild.Build(
images=[dst_container_image_uri],
steps=[
cloudbuild.BuildStep(
name="gcr.io/cloud-builders/docker",
entrypoint="bash",
args=[
"-exc",
'docker pull --quiet "$0" && docker tag "$0" "$1"',
src_container_image_uri,
dst_container_image_uri,
],
),
],
timeout=protobuf.duration_pb2.Duration(
seconds=1800,
),
)
build_operation = build_client.create_build(
project_id=project_id,
build=build_config,
)
try:
result = build_operation.result()
except:
print(f"Logs are available at [{build_operation.metadata.build.log_url}].")
raise
return result
project_id = aiplatform.initializer.global_config.project
mirrored_container_uri = f"gcr.io/{project_id}/container_mirror/{container_image_uri}"
# FIX: Only mirror when image does not exist
# docker does is unable to get the registry data from inside container (it cannot connecto to docker socket):
# docker.errors.DockerException: Error while fetching server API version: ('Connection aborted.', FileNotFoundError(2, 'No such file or directory'))
# import docker
# try:
# docker_client = docker.from_env()
# docker_client.images.get_registry_data(mirrored_container_uri)
# except docker.errors.NotFound:
if True:
print(f"Mirroring {container_image_uri} to {mirrored_container_uri}")
copy_container_image(
src_container_image_uri=container_image_uri,
dst_container_image_uri=mirrored_container_uri,
project_id=project_id,
)
container_image_uri = mirrored_container_uri
# End of container image mirroring code
model_archive_file_name = os.path.basename(model_archive_path)
model_archive_dir = os.path.dirname(model_archive_path)
model = aiplatform.Model.upload(
# FIX: Use public image or mirror the official image
#serving_container_image_uri="gcr.io/avolkov-31337/mirror/pytorch/torchserve",
serving_container_image_uri=container_image_uri,
artifact_uri=model_archive_dir,
serving_container_command=[
"bash",
"-exc",
'''
model_archive_uri="$0"
#model_archive_local_path=$(mktemp --suffix ".mar")
# For some reason the model must already be inside the model-store directory.
model_archive_local_path=./model-store/model.mar
# Downloading the model archive from GCS
# TODO: Fix gsutil bugs (requires project ID, has auth issues) and use gsutil instead.
# gsutil cp "$model_archive_uri" "$model_archive_local_path"
pip install google-cloud-storage
python -c '
import sys
from google.cloud import storage
model_archive_uri = sys.argv[1]
model_archive_local_path = sys.argv[2]
storage_client = storage.Client()
blob = storage.Blob.from_string(uri=model_archive_uri, client=storage_client)
blob.download_to_filename(filename=model_archive_local_path)
' "$model_archive_uri" "$model_archive_local_path"
#Note: config.properties is owned by root. Our user is not root.
echo "
service_envelope=json
# Needed for external access
inference_address=http://0.0.0.0:8080
management_address=http://0.0.0.0:8081
" > config2.properties
torchserve --start --foreground --no-config-snapshots --models main-model="$model_archive_local_path" --model-store ./model-store/ --ts-config config2.properties
''',
"$(AIP_STORAGE_URI)/" + model_archive_file_name,
],
serving_container_predict_route="/predictions/main-model",
#serving_container_predict_route="/v1/models/main-model:predict",
serving_container_health_route="/ping",
serving_container_ports=[8080],
display_name=display_name,
description=description,
# instance_schema_uri=instance_schema_uri,
# parameters_schema_uri=parameters_schema_uri,
# prediction_schema_uri=prediction_schema_uri,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
project=project,
location=location,
labels=labels,
# encryption_spec_key_name=encryption_spec_key_name,
staging_bucket=staging_bucket,
)
model_json = json.dumps(model.to_dict(), indent=2)
print(model_json)
return (model.resource_name, model_json)
def _deserialize_bool(s) -> bool:
from distutils.util import strtobool
return strtobool(s) == 1
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import json
import argparse
_parser = argparse.ArgumentParser(prog='Upload PyTorch model archive to Google Cloud Vertex AI', description='')
_parser.add_argument("--model-archive", dest="model_archive_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--torchserve-version", dest="torchserve_version", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--use-gpu", dest="use_gpu", type=_deserialize_bool, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = upload_PyTorch_model_archive_to_Google_Cloud_Vertex_AI(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model-archive
- {inputPath: model_archive}
- if:
cond: {isPresent: torchserve_version}
then:
- --torchserve-version
- {inputValue: torchserve_version}
- if:
cond: {isPresent: use_gpu}
then:
- --use-gpu
- {inputValue: use_gpu}
- if:
cond: {isPresent: display_name}
then:
- --display-name
- {inputValue: display_name}
- if:
cond: {isPresent: description}
then:
- --description
- {inputValue: description}
- if:
cond: {isPresent: project}
then:
- --project
- {inputValue: project}
- if:
cond: {isPresent: location}
then:
- --location
- {inputValue: location}
- if:
cond: {isPresent: labels}
then:
- --labels
- {inputValue: labels}
- if:
cond: {isPresent: staging_bucket}
then:
- --staging-bucket
- {inputValue: staging_bucket}
- '----output-paths'
- {outputPath: model_name}
- {outputPath: model_dict}
@@ -1,181 +0,0 @@
name: Upload Scikit learn pickle model to Google Cloud Vertex AI
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Upload_Scikit-learn_pickle_model/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model, type: ScikitLearnPickleModel}
- {name: sklearn_version, type: String, optional: true}
- {name: display_name, type: String, optional: true}
- {name: description, type: String, optional: true}
- {name: project, type: String, optional: true}
- {name: location, type: String, optional: true}
- {name: labels, type: JsonObject, optional: true}
- {name: staging_bucket, type: String, optional: true}
outputs:
- {name: model_name, type: String}
- {name: model_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.16.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.16.0'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI(
model_path,
sklearn_version = None,
display_name = None,
description = None,
# Uncomment when anyone requests these:
# instance_schema_uri: str = None,
# parameters_schema_uri: str = None,
# prediction_schema_uri: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
project = None,
location = None,
labels = None,
# encryption_spec_key_name: str = None,
staging_bucket = None,
):
import json
import os
import shutil
import tempfile
from google.cloud import aiplatform
if not location:
location = os.environ.get("CLOUD_ML_REGION")
if not labels:
labels = {}
labels["component-source"] = "github-com-ark-kun-pipeline-components"
# The serving container decides the model type based on the model file extension.
# So we need to rename the mode file (e.g. /tmp/inputs/model/data) to *.pkl
_, renamed_model_path = tempfile.mkstemp(suffix=".pkl")
shutil.copyfile(src=model_path, dst=renamed_model_path)
model = aiplatform.Model.upload_scikit_learn_model_file(
model_file_path=renamed_model_path,
sklearn_version=sklearn_version,
display_name=display_name,
description=description,
# instance_schema_uri=instance_schema_uri,
# parameters_schema_uri=parameters_schema_uri,
# prediction_schema_uri=prediction_schema_uri,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
project=project,
location=location,
labels=labels,
# encryption_spec_key_name=encryption_spec_key_name,
staging_bucket=staging_bucket,
)
model_json = json.dumps(model.to_dict(), indent=2)
print(model_json)
return (model.resource_name, model_json)
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import json
import argparse
_parser = argparse.ArgumentParser(prog='Upload Scikit learn pickle model to Google Cloud Vertex AI', description='')
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--sklearn-version", dest="sklearn_version", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = upload_Scikit_learn_pickle_model_to_Google_Cloud_Vertex_AI(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model
- {inputPath: model}
- if:
cond: {isPresent: sklearn_version}
then:
- --sklearn-version
- {inputValue: sklearn_version}
- if:
cond: {isPresent: display_name}
then:
- --display-name
- {inputValue: display_name}
- if:
cond: {isPresent: description}
then:
- --description
- {inputValue: description}
- if:
cond: {isPresent: project}
then:
- --project
- {inputValue: project}
- if:
cond: {isPresent: location}
then:
- --location
- {inputValue: location}
- if:
cond: {isPresent: labels}
then:
- --labels
- {inputValue: labels}
- if:
cond: {isPresent: staging_bucket}
then:
- --staging-bucket
- {inputValue: staging_bucket}
- '----output-paths'
- {outputPath: model_name}
- {outputPath: model_dict}
@@ -1,190 +0,0 @@
name: Upload Tensorflow model to Google Cloud Vertex AI
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/KFPv2_hell/components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model, type: TensorflowSavedModel}
- {name: tensorflow_version, type: String, optional: true}
- name: use_gpu
type: Boolean
default: "False"
optional: true
- {name: display_name, type: String, optional: true}
- {name: description, type: String, optional: true}
- {name: project, type: String, optional: true}
- {name: location, type: String, optional: true}
- {name: labels, type: JsonObject, optional: true}
- {name: staging_bucket, type: String, optional: true}
outputs:
- {name: model_name, type: String}
- {name: model_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.16.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.16.0'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def upload_Tensorflow_model_to_Google_Cloud_Vertex_AI(
model_path,
tensorflow_version = None,
use_gpu = False,
display_name = None,
description = None,
# Uncomment when anyone requests these:
# instance_schema_uri: str = None,
# parameters_schema_uri: str = None,
# prediction_schema_uri: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
project = None,
location = None,
labels = None,
# encryption_spec_key_name: str = None,
staging_bucket = None,
):
import json
import os
from google.cloud import aiplatform
if not location:
location = os.environ.get("CLOUD_ML_REGION")
if not labels:
labels = {}
labels["component-source"] = "github-com-ark-kun-pipeline-components"
model = aiplatform.Model.upload_tensorflow_saved_model(
saved_model_dir=model_path,
tensorflow_version=tensorflow_version,
use_gpu=use_gpu,
display_name=display_name,
description=description,
# instance_schema_uri=instance_schema_uri,
# parameters_schema_uri=parameters_schema_uri,
# prediction_schema_uri=prediction_schema_uri,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
project=project,
location=location,
labels=labels,
# encryption_spec_key_name=encryption_spec_key_name,
staging_bucket=staging_bucket,
)
model_json = json.dumps(model.to_dict(), indent=2)
print(model_json)
return (model.resource_name, model_json)
def _deserialize_bool(s) -> bool:
from distutils.util import strtobool
return strtobool(s) == 1
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import json
import argparse
_parser = argparse.ArgumentParser(prog='Upload Tensorflow model to Google Cloud Vertex AI', description='')
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--tensorflow-version", dest="tensorflow_version", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--use-gpu", dest="use_gpu", type=_deserialize_bool, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model
- {inputPath: model}
- if:
cond: {isPresent: tensorflow_version}
then:
- --tensorflow-version
- {inputValue: tensorflow_version}
- if:
cond: {isPresent: use_gpu}
then:
- --use-gpu
- {inputValue: use_gpu}
- if:
cond: {isPresent: display_name}
then:
- --display-name
- {inputValue: display_name}
- if:
cond: {isPresent: description}
then:
- --description
- {inputValue: description}
- if:
cond: {isPresent: project}
then:
- --project
- {inputValue: project}
- if:
cond: {isPresent: location}
then:
- --location
- {inputValue: location}
- if:
cond: {isPresent: labels}
then:
- --labels
- {inputValue: labels}
- if:
cond: {isPresent: staging_bucket}
then:
- --staging-bucket
- {inputValue: staging_bucket}
- '----output-paths'
- {outputPath: model_name}
- {outputPath: model_dict}
@@ -1,181 +0,0 @@
name: Upload XGBoost model to Google Cloud Vertex AI
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/google-cloud/Vertex_AI/Models/Upload_XGBoost_model/workaround_for_buggy_KFPv2_compiler/component.yaml'}
inputs:
- {name: model, type: XGBoostModel}
- {name: xgboost_version, type: String, optional: true}
- {name: display_name, type: String, optional: true}
- {name: description, type: String, optional: true}
- {name: project, type: String, optional: true}
- {name: location, type: String, optional: true}
- {name: labels, type: JsonObject, optional: true}
- {name: staging_bucket, type: String, optional: true}
outputs:
- {name: model_name, type: String}
- {name: model_dict, type: JsonObject}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'google-cloud-aiplatform==1.16.0' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3
-m pip install --quiet --no-warn-script-location 'google-cloud-aiplatform==1.16.0'
--user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def upload_XGBoost_model_to_Google_Cloud_Vertex_AI(
model_path,
xgboost_version = None,
display_name = None,
description = None,
# Uncomment when anyone requests these:
# instance_schema_uri: str = None,
# parameters_schema_uri: str = None,
# prediction_schema_uri: str = None,
# explanation_metadata: "google.cloud.aiplatform_v1.types.explanation_metadata.ExplanationMetadata" = None,
# explanation_parameters: "google.cloud.aiplatform_v1.types.explanation.ExplanationParameters" = None,
project = None,
location = None,
labels = None,
# encryption_spec_key_name: str = None,
staging_bucket = None,
):
import json
import os
import shutil
import tempfile
from google.cloud import aiplatform
if not location:
location = os.environ.get("CLOUD_ML_REGION")
if not labels:
labels = {}
labels["component-source"] = "github-com-ark-kun-pipeline-components"
# The serving container decides the model type based on the model file extension.
# So we need to rename the mode file (e.g. /tmp/inputs/model/data) to *.pkl
_, renamed_model_path = tempfile.mkstemp(suffix=".pkl")
shutil.copyfile(src=model_path, dst=renamed_model_path)
model = aiplatform.Model.upload_xgboost_model_file(
model_file_path=renamed_model_path,
xgboost_version=xgboost_version,
display_name=display_name,
description=description,
# instance_schema_uri=instance_schema_uri,
# parameters_schema_uri=parameters_schema_uri,
# prediction_schema_uri=prediction_schema_uri,
# explanation_metadata=explanation_metadata,
# explanation_parameters=explanation_parameters,
project=project,
location=location,
labels=labels,
# encryption_spec_key_name=encryption_spec_key_name,
staging_bucket=staging_bucket,
)
model_json = json.dumps(model.to_dict(), indent=2)
print(model_json)
return (model.resource_name, model_json)
def _serialize_json(obj) -> str:
if isinstance(obj, str):
return obj
import json
def default_serializer(obj):
if hasattr(obj, 'to_struct'):
return obj.to_struct()
else:
raise TypeError("Object of type '%s' is not JSON serializable and does not have .to_struct() method." % obj.__class__.__name__)
return json.dumps(obj, default=default_serializer, sort_keys=True)
def _serialize_str(str_value: str) -> str:
if not isinstance(str_value, str):
raise TypeError('Value "{}" has type "{}" instead of str.'.format(str(str_value), str(type(str_value))))
return str_value
import json
import argparse
_parser = argparse.ArgumentParser(prog='Upload XGBoost model to Google Cloud Vertex AI', description='')
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--xgboost-version", dest="xgboost_version", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--display-name", dest="display_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--description", dest="description", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--project", dest="project", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--location", dest="location", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--labels", dest="labels", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--staging-bucket", dest="staging_bucket", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("----output-paths", dest="_output_paths", type=str, nargs=2)
_parsed_args = vars(_parser.parse_args())
_output_files = _parsed_args.pop("_output_paths", [])
_outputs = upload_XGBoost_model_to_Google_Cloud_Vertex_AI(**_parsed_args)
_output_serializers = [
_serialize_str,
_serialize_json,
]
import os
for idx, output_file in enumerate(_output_files):
try:
os.makedirs(os.path.dirname(output_file))
except OSError:
pass
with open(output_file, 'w') as f:
f.write(_output_serializers[idx](_outputs[idx]))
args:
- --model
- {inputPath: model}
- if:
cond: {isPresent: xgboost_version}
then:
- --xgboost-version
- {inputValue: xgboost_version}
- if:
cond: {isPresent: display_name}
then:
- --display-name
- {inputValue: display_name}
- if:
cond: {isPresent: description}
then:
- --description
- {inputValue: description}
- if:
cond: {isPresent: project}
then:
- --project
- {inputValue: project}
- if:
cond: {isPresent: location}
then:
- --location
- {inputValue: location}
- if:
cond: {isPresent: labels}
then:
- --labels
- {inputValue: labels}
- if:
cond: {isPresent: staging_bucket}
then:
- --staging-bucket
- {inputValue: staging_bucket}
- '----output-paths'
- {outputPath: model_name}
- {outputPath: model_dict}
@@ -1,35 +0,0 @@
name: Download from GCS
inputs:
- {name: GCS path, type: String}
outputs:
- {name: Data}
metadata:
annotations:
author: Alexey Volkov <alexey.volkov@ark-kun.com>
canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/google-cloud/storage/download/workaround_for_buggy_KFPv2_compiler/component.yaml'
implementation:
container:
image: google/cloud-sdk
command:
- bash # Pattern comparison only works in Bash
- -ex
- -c
- |
if [ -n "${GOOGLE_APPLICATION_CREDENTIALS}" ]; then
gcloud auth activate-service-account --key-file="${GOOGLE_APPLICATION_CREDENTIALS}"
fi
uri="$0"
output_path="$1"
# Checking whether the URI points to a single blob, a directory or a URI pattern
# URI points to a blob when that URI does not end with slash and listing that URI only yields the same URI
if [[ "$uri" != */ ]] && (gsutil ls "$uri" | grep --fixed-strings --line-regexp "$uri"); then
mkdir -p "$(dirname "$output_path")"
gsutil -m cp -r "$uri" "$output_path"
else
mkdir -p "$output_path" # When source path is a directory, gsutil requires the destination to also be a directory
gsutil -m rsync -r "$uri" "$output_path" # gsutil cp has different path handling than Linux cp. It always puts the source directory (name) inside the destination directory. gsutil rsync does not have that problem.
fi
- inputValue: GCS path
- outputPath: Data
@@ -1,112 +0,0 @@
name: Load image classification model from tfhub
description: |
Loads specified model from TFHub, creates layer to receive additional (3 channel) imagery data.
Args:
class_names (Sequence[str]):
Sequence of strings of categories for classification corresponding to input data.
loaded_model_path (str):
Output path for the loaded model.
image_size_path (str):
Output path for the model expected image size.
model_name (Optional[str]):
Name of the pre-trained image classification model to load from TFHub.
Eligible model_name:
- efficientnetv2-s
- efficientnetv2-m
- efficientnetv2-l
- efficientnetv2-s-21k
- efficientnetv2-m-21k
- efficientnetv2-l-21k
- efficientnetv2-xl-21k
- efficientnetv2-b0-21k
- efficientnetv2-b1-21k
- efficientnetv2-b2-21k
- efficientnetv2-b3-21k
- efficientnetv2-s-21k-ft1k
- efficientnetv2-m-21k-ft1k
- efficientnetv2-l-21k-ft1k
- efficientnetv2-xl-21k-ft1k
- efficientnetv2-b0-21k-ft1k
- efficientnetv2-b1-21k-ft1k
- efficientnetv2-b2-21k-ft1k
- efficientnetv2-b3-21k-ft1k
- efficientnetv2-b0
- efficientnetv2-b1
- efficientnetv2-b2
- efficientnetv2-b3
- efficientnet_b0
- efficientnet_b1
- efficientnet_b2
- efficientnet_b3
- efficientnet_b4
- efficientnet_b5
- efficientnet_b6
- efficientnet_b7
- bit_s-r50x1
- inception_v3
- inception_resnet_v2
- resnet_v1_50
- resnet_v1_101
- resnet_v1_152
- resnet_v2_50
- resnet_v2_101
- resnet_v2_152
- nasnet_large
- nasnet_mobile
- pnasnet_large
- mobilenet_v2_100_224
- mobilenet_v2_130_224
- mobilenet_v2_140_224
- mobilenet_v3_small_100_224
- mobilenet_v3_small_075_224
- mobilenet_v3_large_100_224
- mobilenet_v3_large_075_224
dropout_rate (Optional[float]):
Fraction of input units to drop in the last layer. Value should be between 0.0 and 1.0.
trainable (Optional[bool]):
If true fine tuning will be performed on entire Hub model. If false only additional
layers will be trained.
l2_regularization_penalty (Optional[float]):
l2 regularization penalty.
inputs:
- {name: class_names, type: 'typing.List[str]', description: List of class names corresponding
to the input image data}
- {name: model_name, type: String, description: Name of the TFHub model to load, default: efficientnetv2-xl-21k,
optional: true}
- {name: dropout_rate, type: Float, description: Dropout rate, default: '0.2', optional: true}
- name: trainable
type: Boolean
description: True if fine tuning should be performed
default: "True"
optional: true
- {name: l2_regularization_penalty, type: Float, description: Regularization penalty,
default: '0.0001', optional: true}
outputs:
- {name: loaded_model_path, type: TensorflowSavedModel, description: Output path for
the loaded model}
- {name: image_size_path, type: HeightWidth}
implementation:
container:
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
# command is a list of strings (command-line arguments).
# The YAML language has two syntaxes for lists and you can use either of them.
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
command: [
python3,
# Path of the program inside the container
/pipelines/component/src/loading_component.py,
--loaded-model-path,
{outputPath: loaded_model_path},
--class-names,
{inputValue: class_names},
--model-name,
{inputValue: model_name},
--dropout-rate,
{inputValue: dropout_rate},
--trainable,
{inputValue: trainable},
--l2-regularization-penalty,
{inputValue: l2_regularization_penalty},
--image-size-path,
{outputPath: image_size_path},
]
@@ -1,62 +0,0 @@
# python3 -m pip install "kfp<2.0.0" "google-cloud-aiplatform>=1.16.0" --upgrade --quiet
from kfp import components
from kfp.v2 import dsl
# %% Loading components
upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Upload_Tensorflow_model/component.yaml')
deploy_model_to_endpoint_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/399405402d95f4a011e2d2e967c96f8508ba5688/community-content/pipeline_components/google-cloud/Vertex_AI/Models/Deploy_to_endpoint/component.yaml')
transcode_imagedataset_tfrecord_from_csv_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/community-content/pipeline_components/image_ml_model_training/transcode_tfrecord_image_dataset_from_csv/component.yaml')
load_image_classification_model_from_tfhub_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/b5b65198a6c2ffe8c0fa2aa70127e3325752df68/community-content/pipeline_components/image_ml_model_training/load_image_classification_model/component.yaml')
preprocess_image_data_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/community-content/pipeline_components/image_ml_model_training/preprocess_image_data/component.yaml')
train_tensorflow_image_classification_model_op = components.load_component_from_url('https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/community-content/pipeline_components/image_ml_model_training/train_image_classification_model/component.yaml')
# %% Pipeline definition
def image_classification_pipeline():
class_names = ['daisy', 'dandelion', 'roses', 'sunflowers', 'tulips']
csv_image_data_path = 'gs://cloud-samples-data/ai-platform/flowers/flowers.csv'
deploy_model = False
image_data = dsl.importer(
artifact_uri=csv_image_data_path, artifact_class=dsl.Dataset).output
image_tfrecord_data = transcode_imagedataset_tfrecord_from_csv_op(
csv_image_data_path=image_data,
class_names=class_names
).outputs['tfrecord_image_data_path']
loaded_model_outputs = load_image_classification_model_from_tfhub_op(
class_names=class_names,
).outputs
preprocessed_data = preprocess_image_data_op(
image_tfrecord_data,
height_width_path=loaded_model_outputs['image_size_path'],
).outputs
trained_model = (train_tensorflow_image_classification_model_op(
preprocessed_training_data_path = preprocessed_data['preprocessed_training_data_path'],
preprocessed_validation_data_path = preprocessed_data['preprocessed_validation_data_path'],
model_path=loaded_model_outputs['loaded_model_path']).
set_cpu_limit('96').
set_memory_limit('128G').
add_node_selector_constraint('cloud.google.com/gke-accelerator', 'NVIDIA_TESLA_A100').
set_gpu_limit('8').
outputs['trained_model_path'])
vertex_model_name = upload_Tensorflow_model_to_Google_Cloud_Vertex_AI_op(
model=trained_model,
).outputs['model_name']
# Deploying the model might incur additional costs over time
if deploy_model:
vertex_endpoint_name = deploy_model_to_endpoint_op(
model_name=vertex_model_name,
).outputs['endpoint_name']
pipeline_func = image_classification_pipeline
# %% Pipeline submission
if __name__ == '__main__':
from google.cloud import aiplatform
aiplatform.PipelineJob.from_pipeline_func(pipeline_func=pipeline_func).submit()
@@ -1,57 +0,0 @@
name: Preprocess image data
description: |
Preprocess the image data and split between train and validation.
Args:
input_data_path (str):
Input path for the TFRecord image data. Data will be formatted as 'label' (encoded image
label), and 'image_raw' (the binary string of the image data).
height_width_path (str):
Path to square height and width to resize images to. File should contain single float value.
Value is dependent on training model.
preprocessed_training_data_path (str):
Output path for the TFRecord training data. Data will be formatted as 'label' (encoded image
label), and 'image_raw' (the binary string of the image data).
preprocessed_validation_data_path (str):
Output path for the TFRecord validation data. Data will be formatted as 'label' (encoded
image label), and 'image_raw' (the binary string of the image data).
validation_split (Optional[float]):
Fraction of data that will make up validation dataset. Value should be between 0.0 and 1.0.
seed (Optional[int]):
The global random seed to ensure the system gets a unique random sequence
that is deterministic (https://www.tensorflow.org/api_docs/python/tf/random/set_seed).
inputs:
- {name: input_data_path, type: ImageDatasetTFRecord, description: 'Input path for
the TFRecord image data,'}
- {name: height_width_path, type: HeightWidth, description: 'Path to square height and width to
resize images to,'}
- {name: validation_split, type: Float, description: 'Fraction of data that will make
up validation dataset,', default: '0.2', optional: true}
- {name: seed, type: Integer, description: Random seed, default: '0', optional: true}
outputs:
- {name: preprocessed_training_data_path, type: ImageDatasetTFRecord, description: 'Output
path for the training data,'}
- {name: preprocessed_validation_data_path, type: ImageDatasetTFRecord, description: 'Output
path for the validation data,'}
implementation:
container:
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
# command is a list of strings (command-line arguments).
# The YAML language has two syntaxes for lists and you can use either of them.
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
command: [
python3,
# Path of the program inside the container
/pipelines/component/src/preprocessing_component.py,
--input-data-path,
{inputPath: input_data_path},
--height-width-path,
{inputPath: height_width_path},
--validation-split,
{inputValue: validation_split},
--seed,
{inputValue: seed},
--preprocessed-training-data-path,
{outputPath: preprocessed_training_data_path},
--preprocessed-validation-data-path,
{outputPath: preprocessed_validation_data_path},
]
@@ -1,90 +0,0 @@
name: Train tensorflow image classification model
description: |
Creates a trained image classification TensorFlow model.
Args:
preprocessed_training_data_path (str):
Input path to the TFRecord training data. Data will be formatted as 'label' (encoded image
label), and 'image_raw' (the binary string of the image data).
preprocessed_validation_data_path (str):
Input path to the TFRecord validation data. Data will be formatted as 'label' (encoded
image label), and 'image_raw' (the binary string of the image data).
model_path (str):
Input path to the loaded pre-trained model.
trained_model_path (str):
Output path to save the trained model to.
optimizer_name (Optional[str]):
Name of the tf.keras optimizer. Available optimizers are listed at
https://keras.io/api/optimizers/
optimizer_parameters (Optional[Dict[str, str]]):
Optimizer parameters.
loss_function_name (Optional[str]):
Name of the loss function.
loss_function_parameters (Optional[Dict[str, str]]):
Loss function parameters.
number_of_epochs (Optional[int]):
Number of training iterations over data.
metric_names (Optional[Sequence[str]]):
List of tf.keras.metrics to be evaluated by the model during training and testing. Available
metrics are listed at https://keras.io/api/metrics/.
seed Optional(int):
The global random seed to ensure the system gets a unique random sequence
that is deterministic (https://www.tensorflow.org/api_docs/python/tf/random/set_seed).
inputs:
- {name: preprocessed_training_data_path, type: ImageDatasetTFRecord, description: 'Input
path for the training data,'}
- {name: preprocessed_validation_data_path, type: ImageDatasetTFRecord, description: 'Input
path for the validation data,'}
- {name: model_path, type: TensorflowSavedModel, description: 'Input path for the
model,'}
- {name: optimizer_name, type: String, description: 'Name of the optimizer,', default: SGD,
optional: true}
- {name: optimizer_parameters, type: 'typing.Dict[str, str]', description: 'Optimizer
parameters,', default: '{}', optional: true}
- {name: loss_function_name, type: String, description: 'Name of the loss function,',
default: CategoricalCrossentropy, optional: true}
- {name: loss_function_parameters, type: 'typing.Dict[str, str]', description: 'Loss
function parameters,', default: '{}', optional: true}
- {name: number_of_epochs, type: Integer, description: 'Number of epochs,', default: '10',
optional: true}
- {name: metric_names, type: 'typing.List[str]', description: 'List of metrics to
use,', default: '["accuracy"]', optional: true}
- {name: seed, type: Integer, description: 'Random seed,', default: '0', optional: true}
- {name: batch_size, type: Integer, description: Batch size, default: '16', optional: true}
outputs:
- {name: trained_model_path, type: TensorflowSavedModel, description: 'Output path
for the saved model,'}
implementation:
container:
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
# command is a list of strings (command-line arguments).
# The YAML language has two syntaxes for lists and you can use either of them.
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
command: [
python3,
# Path of the program inside the container
/pipelines/component/src/training_component.py,
--preprocessed-training-data-path,
{inputPath: preprocessed_training_data_path},
--preprocessed-validation-data-path,
{inputPath: preprocessed_validation_data_path},
--model-path,
{inputPath: model_path},
--trained-model-path,
{outputPath: trained_model_path},
--optimizer-name,
{inputValue: optimizer_name},
--loss-function-name,
{inputValue: loss_function_name},
--number-of-epochs,
{inputValue: number_of_epochs},
--seed,
{inputValue: seed},
--batch-size,
{inputValue: batch_size},
--metric-names,
{inputValue: metric_names},
--optimizer-parameters,
{inputValue: optimizer_parameters},
--loss-function-parameters,
{inputValue: loss_function_parameters},
]
@@ -1,37 +0,0 @@
name: Transcode imagedataset tfrecord from csv
description: |
Transcodes CSV Data into TFRecord file of TFExamples.
Args:
csv_image_data_path (str):
Path to the CSV image data. Data must include 'image_filepath' (Path to image file) and
'image_label' (output for a prediction) fields.
class_names (Sequence[str]):
Sequence of strings of categories for classification corresponding to input data.
tfrecord_image_data_path (str):
Output path for the TFRecord image data. Data will be formatted as 'label' (encoded image
label), and 'image_raw' (the binary string of the image data).
inputs:
- {name: csv_image_data_path, type: ImageDatasetCSV, description: Input path for the
CSV image data}
- {name: class_names, type: 'typing.List[str]', description: List of class names corresponding
to the input image data}
outputs:
- {name: tfrecord_image_data_path, type: ImageDatasetTFRecord, description: Output
path for the TFRecord image data}
implementation:
container:
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
# command is a list of strings (command-line arguments).
# The YAML language has two syntaxes for lists and you can use either of them.
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
command: [
python3,
# Path of the program inside the container
/pipelines/component/src/transcoding_csv_component.py,
--csv-image-data-path,
{inputPath: csv_image_data_path},
--tfrecord-image-data-path,
{outputPath: tfrecord_image_data_path},
--class-names,
{inputValue: class_names},
]
@@ -1,39 +0,0 @@
name: Transcode imagedataset tfrecord from jsonlines
description: |
Transcodes JSONL Data into TFRecord file of TFExamples.
Args:
jsonl_image_data_path (str):
Input path for the JSONL image data
Path to the JSONL image data. Each line corresponds to a JSON input describing an image.
Schema follows AutoML image classification JSONL format
https://cloud.google.com/vertex-ai/docs/image-data/classification/prepare-data#json-lines.
class_names (Sequence[str]):
Sequence of strings of categories for classification corresponding to input data.
tfrecord_image_data_path (str):
Output path for the TFRecord image data. Data will be formatted as 'label' (encoded image
label), and 'image_raw' (the binary string of the image data).
inputs:
- {name: jsonl_image_data_path, type: ImageDatasetJsonLines, description: Input path
for the JSONL image data}
- {name: class_names, type: 'typing.List[str]', description: List of class names corresponding
to the input image data}
outputs:
- {name: tfrecord_image_data_path, type: ImageDatasetTFRecord, description: Output
path for the TFRecord image data}
implementation:
container:
image: us-docker.pkg.dev/vertex-ai/ready-to-go-image-classification/image-components:v0.1
# command is a list of strings (command-line arguments).
# The YAML language has two syntaxes for lists and you can use either of them.
# Here we use the "flow syntax" - comma-separated strings inside square brackets.
command: [
python3,
# Path of the program inside the container
/pipelines/component/src/transcoding_jsonl_component.py,
--jsonl-image-data-path,
{inputPath: jsonl_image_data_path},
--tfrecord-image-data-path,
{outputPath: tfrecord_image_data_path},
--class-names,
{inputValue: class_names},
]
@@ -1,113 +0,0 @@
name: Binarize column using Pandas on CSV data
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/pandas/Binarize_column/in_CSV_format/component.yaml'}
inputs:
- {name: table, type: CSV}
- {name: column_name, type: String}
- {name: predicate, type: String, default: '> 0', optional: true}
- {name: new_column_name, type: String, optional: true}
- name: keep_original_column
type: Boolean
default: "False"
optional: true
outputs:
- {name: transformed_table, type: CSV}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'pandas==1.4.3' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
--no-warn-script-location 'pandas==1.4.3' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def binarize_column_using_Pandas_on_CSV_data(
table_path,
transformed_table_path,
column_name,
predicate = "> 0",
new_column_name = None,
keep_original_column = False,
):
import pandas
df = pandas.read_csv(table_path).convert_dtypes()
original_series = df[column_name]
# Dynamically executing the predicate code
# Variable namespace for code execution
namespace = dict(x=original_series)
# I though that there should be no space before `predicate` so that "dot" predicate methods like ".between(min, max)" work.
# However Python allows spaces before dot: `df .isna()`.
# So having a space is not a problem
transform_code = f"""new_series_boolean = x {predicate}"""
# Note: exec() takes no keyword arguments
# exec(__source=transform_code, __globals=namespace)
exec(transform_code, namespace)
new_series_boolean = namespace["new_series_boolean"]
# There are multiple ways to convert boolean column to integer.
# .apply(int) might be faster. https://stackoverflow.com/a/49804868/1497385
# TODO: Do a proper benchmark.
new_series = new_series_boolean.apply(int)
# new_series = new_series_boolean.astype(int)
# new_series = new_series_boolean.replace({False: 0, True: 1})
if new_column_name:
df.insert(loc=0, column=new_column_name, value=new_series)
if not keep_original_column:
df = df.drop(columns=[column_name])
else:
df[column_name] = new_series
df.to_csv(transformed_table_path, index=False)
def _deserialize_bool(s) -> bool:
from distutils.util import strtobool
return strtobool(s) == 1
import argparse
_parser = argparse.ArgumentParser(prog='Binarize column using Pandas on CSV data', description='')
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--column-name", dest="column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--predicate", dest="predicate", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--new-column-name", dest="new_column_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--keep-original-column", dest="keep_original_column", type=_deserialize_bool, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--transformed-table", dest="transformed_table_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = binarize_column_using_Pandas_on_CSV_data(**_parsed_args)
args:
- --table
- {inputPath: table}
- --column-name
- {inputValue: column_name}
- if:
cond: {isPresent: predicate}
then:
- --predicate
- {inputValue: predicate}
- if:
cond: {isPresent: new_column_name}
then:
- --new-column-name
- {inputValue: new_column_name}
- if:
cond: {isPresent: keep_original_column}
then:
- --keep-original-column
- {inputValue: keep_original_column}
- --transformed-table
- {outputPath: transformed_table}
@@ -1,75 +0,0 @@
name: Fill all missing values using Pandas on CSV data
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/pandas/Fill_all_missing_values/in_CSV_format/component.yaml'}
inputs:
- {name: table, type: CSV}
- {name: replacement_value, type: String, default: '0', optional: true}
- {name: column_names, type: JsonArray, optional: true}
outputs:
- {name: transformed_table, type: CSV}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'pandas==1.4.1' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
--no-warn-script-location 'pandas==1.4.1' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def fill_all_missing_values_using_Pandas_on_CSV_data(
table_path,
transformed_table_path,
replacement_value = "0",
column_names = None,
):
import pandas
df = pandas.read_csv(
table_path,
dtype="string",
)
for column_name in column_names or df.columns:
df[column_name] = df[column_name].fillna(value=replacement_value)
df.to_csv(
transformed_table_path, index=False,
)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Fill all missing values using Pandas on CSV data', description='')
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--replacement-value", dest="replacement_value", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--column-names", dest="column_names", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--transformed-table", dest="transformed_table_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = fill_all_missing_values_using_Pandas_on_CSV_data(**_parsed_args)
args:
- --table
- {inputPath: table}
- if:
cond: {isPresent: replacement_value}
then:
- --replacement-value
- {inputValue: replacement_value}
- if:
cond: {isPresent: column_names}
then:
- --column-names
- {inputValue: column_names}
- --transformed-table
- {outputPath: transformed_table}
@@ -1,59 +0,0 @@
name: Select columns using Pandas on CSV data
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/pandas/Select_columns/in_CSV_format/component.yaml'}
inputs:
- {name: table, type: CSV}
- {name: column_names, type: JsonArray}
outputs:
- {name: transformed_table, type: CSV}
implementation:
container:
image: python:3.9
command:
- sh
- -c
- (PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet --no-warn-script-location
'pandas==1.4.2' || PIP_DISABLE_PIP_VERSION_CHECK=1 python3 -m pip install --quiet
--no-warn-script-location 'pandas==1.4.2' --user) && "$0" "$@"
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def select_columns_using_Pandas_on_CSV_data(
table_path,
transformed_table_path,
column_names,
):
import pandas
df = pandas.read_csv(
table_path,
dtype="string",
)
df = df[column_names]
df.to_csv(transformed_table_path, index=False)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Select columns using Pandas on CSV data', description='')
_parser.add_argument("--table", dest="table_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--column-names", dest="column_names", type=json.loads, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--transformed-table", dest="transformed_table_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = select_columns_using_Pandas_on_CSV_data(**_parsed_args)
args:
- --table
- {inputPath: table}
- --column-names
- {inputValue: column_names}
- --transformed-table
- {outputPath: transformed_table}
@@ -1,102 +0,0 @@
name: Create fully connected tensorflow network
description: Creates fully-connected network in Tensorflow SavedModel format
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/tensorflow/Create_fully_connected_network/component.yaml'}
inputs:
- {name: input_size, type: Integer}
- {name: hidden_layer_sizes, type: JsonArray, default: '[]', optional: true}
- {name: output_size, type: Integer, default: '1', optional: true}
- {name: activation_name, type: String, default: relu, optional: true}
- {name: output_activation_name, type: String, optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: model, type: TensorflowSavedModel}
implementation:
container:
image: tensorflow/tensorflow:2.7.0
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def create_fully_connected_tensorflow_network(
input_size,
model_path,
hidden_layer_sizes = [],
output_size = 1,
activation_name = "relu",
output_activation_name = None,
random_seed = 0,
):
"""Creates fully-connected network in Tensorflow SavedModel format"""
import tensorflow as tf
tf.random.set_seed(seed=random_seed)
model = tf.keras.models.Sequential()
model.add(tf.keras.Input(shape=(input_size,)))
for layer_size in hidden_layer_sizes:
model.add(tf.keras.layers.Dense(units=layer_size, activation=activation_name))
# The last layer is left without activation
model.add(tf.keras.layers.Dense(units=output_size, activation=output_activation_name))
print(model.summary())
# Using tf.keras.models.save_model instead of tf.saved_model.save to prevent downstream error:
#tf.saved_model.save(model, model_path)
# ValueError: Unable to create a Keras model from this SavedModel.
# This SavedModel was created with `tf.saved_model.save`, and lacks the Keras metadata.
# Please save your Keras model by calling `model.save`or `tf.keras.models.save_model`.
# See https://github.com/keras-team/keras/issues/16451
tf.keras.models.save_model(model, model_path)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Create fully connected tensorflow network', description='Creates fully-connected network in Tensorflow SavedModel format')
_parser.add_argument("--input-size", dest="input_size", type=int, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--hidden-layer-sizes", dest="hidden_layer_sizes", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--output-size", dest="output_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--activation-name", dest="activation_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--output-activation-name", dest="output_activation_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = create_fully_connected_tensorflow_network(**_parsed_args)
args:
- --input-size
- {inputValue: input_size}
- if:
cond: {isPresent: hidden_layer_sizes}
then:
- --hidden-layer-sizes
- {inputValue: hidden_layer_sizes}
- if:
cond: {isPresent: output_size}
then:
- --output-size
- {inputValue: output_size}
- if:
cond: {isPresent: activation_name}
then:
- --activation-name
- {inputValue: activation_name}
- if:
cond: {isPresent: output_activation_name}
then:
- --output-activation-name
- {inputValue: output_activation_name}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --model
- {outputPath: model}
@@ -1,100 +0,0 @@
name: Predict with TensorFlow model on CSV data
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/tensorflow/Predict/on_CSV/component.yaml'}
inputs:
- {name: dataset, type: CSV}
- {name: model, type: TensorflowSavedModel}
- {name: label_column_name, type: String, optional: true}
- {name: batch_size, type: Integer, default: '1000', optional: true}
outputs:
- {name: predictions}
implementation:
container:
image: tensorflow/tensorflow:2.9.1
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def predict_with_TensorFlow_model_on_CSV_data(
dataset_path,
model_path,
predictions_path,
label_column_name = None,
batch_size = 1000,
):
import numpy
import tensorflow as tf
model = tf.saved_model.load(export_dir=model_path)
dataset = tf.data.experimental.make_csv_dataset(
file_pattern=dataset_path,
batch_size=batch_size,
label_name=label_column_name,
header=True,
num_epochs=1,
shuffle=False,
ignore_errors=False,
)
def stack_feature_batches(features_batch):
# Need to stack individual feature columns to create a single feature tensor
# Need to cast all column tensor types to float to prevent errors.
list_of_feature_batches = list(
tf.cast(x=feature_batch, dtype=tf.float32)
for feature_batch in features_batch.values()
)
return tf.stack(list_of_feature_batches, axis=-1)
def transform_features_and_drop_labels(features_batch, labels_batch):
return stack_feature_batches(features_batch)
dataset_map_fn = (
transform_features_and_drop_labels
if label_column_name
else stack_feature_batches
)
dataset = dataset.map(dataset_map_fn)
with open(predictions_path, "w") as predictions_file:
for features_batch in dataset:
predictions_tensor = model(features_batch)
numpy.savetxt(predictions_file, predictions_tensor.numpy())
import argparse
_parser = argparse.ArgumentParser(prog='Predict with TensorFlow model on CSV data', description='')
_parser.add_argument("--dataset", dest="dataset_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--batch-size", dest="batch_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--predictions", dest="predictions_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = predict_with_TensorFlow_model_on_CSV_data(**_parsed_args)
args:
- --dataset
- {inputPath: dataset}
- --model
- {inputPath: model}
- if:
cond: {isPresent: label_column_name}
then:
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: batch_size}
then:
- --batch-size
- {inputValue: batch_size}
- --predictions
- {outputPath: predictions}
@@ -1,170 +0,0 @@
name: Train model using Keras on CSV
metadata:
annotations: {author: Alexey Volkov <alexey.volkov@ark-kun.com>, canonical_location: 'https://raw.githubusercontent.com/Ark-kun/pipeline_components/master/components/tensorflow/Train_model_using_Keras/on_CSV/component.yaml'}
inputs:
- {name: training_data, type: CSV}
- {name: model, type: TensorflowSavedModel}
- {name: label_column_name, type: String}
- {name: loss_function_name, type: String, default: mean_squared_error, optional: true}
- {name: number_of_epochs, type: Integer, default: '1', optional: true}
- {name: learning_rate, type: Float, default: '0.1', optional: true}
- {name: optimizer_name, type: String, default: Adadelta, optional: true}
- {name: optimizer_parameters, type: JsonObject, optional: true}
- {name: batch_size, type: Integer, default: '32', optional: true}
- {name: metric_names, type: JsonArray, optional: true}
- {name: random_seed, type: Integer, default: '0', optional: true}
outputs:
- {name: trained_model, type: TensorflowSavedModel}
implementation:
container:
image: tensorflow/tensorflow:2.8.0
command:
- sh
- -ec
- |
program_path=$(mktemp)
printf "%s" "$0" > "$program_path"
python3 -u "$program_path" "$@"
- |
def _make_parent_dirs_and_return_path(file_path: str):
import os
os.makedirs(os.path.dirname(file_path), exist_ok=True)
return file_path
def train_model_using_Keras_on_CSV(
training_data_path,
model_path,
trained_model_path,
label_column_name,
loss_function_name = "mean_squared_error",
number_of_epochs = 1,
learning_rate = 0.1,
optimizer_name = "Adadelta",
optimizer_parameters = None,
batch_size = 32,
metric_names = None,
random_seed = 0,
):
import tensorflow as tf
tf.random.set_seed(seed=random_seed)
# Loading model using Keras. Model loaded using TensorFlow does not have .fit.
#model = tf.saved_model.load(export_dir=model_path)
keras_model = tf.keras.models.load_model(filepath=model_path)
optimizer_parameters = optimizer_parameters or {}
optimizer_parameters["learning_rate"] = learning_rate
optimizer_config = {
"class_name": optimizer_name,
"config": optimizer_parameters,
}
optimizer = tf.keras.optimizers.get(optimizer_config)
loss = tf.keras.losses.get(loss_function_name)
training_dataset = tf.data.experimental.make_csv_dataset(
file_pattern=training_data_path,
batch_size=batch_size,
label_name=label_column_name,
header=True,
# Need to specify num_epochs=1 otherwise the training becomes infinite
num_epochs=1,
shuffle=True,
shuffle_seed=random_seed,
ignore_errors=True,
)
def stack_feature_batches(features_batch, labels_batch):
# Need to stack individual feature columns to create a single feature tensor
# Need to cast all column tensor types to float to prevent error:
# TypeError: Tensors in list passed to 'values' of 'Pack' Op have types [int32, float32, float32, int32, int32] that don't all match.
list_of_feature_batches = list(tf.cast(x=feature_batch, dtype=tf.float32) for feature_batch in features_batch.values())
return tf.stack(list_of_feature_batches, axis=-1), labels_batch
training_dataset = training_dataset.map(stack_feature_batches)
# Need to compile the model to prevent error:
# ValueError: No gradients provided for any variable: [..., ...].
keras_model.compile(
optimizer=optimizer,
loss=loss,
metrics=metric_names,
)
keras_model.fit(
training_dataset,
epochs=number_of_epochs,
)
# Using tf.keras.models.save_model instead of tf.saved_model.save to prevent downstream error:
#tf.saved_model.save(keras_model, trained_model_path)
# ValueError: Unable to create a Keras model from this SavedModel.
# This SavedModel was created with `tf.saved_model.save`, and lacks the Keras metadata.
# Please save your Keras model by calling `model.save`or `tf.keras.models.save_model`.
# See https://github.com/keras-team/keras/issues/16451
tf.keras.models.save_model(keras_model, trained_model_path)
import json
import argparse
_parser = argparse.ArgumentParser(prog='Train model using Keras on CSV', description='')
_parser.add_argument("--training-data", dest="training_data_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--model", dest="model_path", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--label-column-name", dest="label_column_name", type=str, required=True, default=argparse.SUPPRESS)
_parser.add_argument("--loss-function-name", dest="loss_function_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--number-of-epochs", dest="number_of_epochs", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--learning-rate", dest="learning_rate", type=float, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--optimizer-name", dest="optimizer_name", type=str, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--optimizer-parameters", dest="optimizer_parameters", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--batch-size", dest="batch_size", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--metric-names", dest="metric_names", type=json.loads, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--random-seed", dest="random_seed", type=int, required=False, default=argparse.SUPPRESS)
_parser.add_argument("--trained-model", dest="trained_model_path", type=_make_parent_dirs_and_return_path, required=True, default=argparse.SUPPRESS)
_parsed_args = vars(_parser.parse_args())
_outputs = train_model_using_Keras_on_CSV(**_parsed_args)
args:
- --training-data
- {inputPath: training_data}
- --model
- {inputPath: model}
- --label-column-name
- {inputValue: label_column_name}
- if:
cond: {isPresent: loss_function_name}
then:
- --loss-function-name
- {inputValue: loss_function_name}
- if:
cond: {isPresent: number_of_epochs}
then:
- --number-of-epochs
- {inputValue: number_of_epochs}
- if:
cond: {isPresent: learning_rate}
then:
- --learning-rate
- {inputValue: learning_rate}
- if:
cond: {isPresent: optimizer_name}
then:
- --optimizer-name
- {inputValue: optimizer_name}
- if:
cond: {isPresent: optimizer_parameters}
then:
- --optimizer-parameters
- {inputValue: optimizer_parameters}
- if:
cond: {isPresent: batch_size}
then:
- --batch-size
- {inputValue: batch_size}
- if:
cond: {isPresent: metric_names}
then:
- --metric-names
- {inputValue: metric_names}
- if:
cond: {isPresent: random_seed}
then:
- --random-seed
- {inputValue: random_seed}
- --trained-model
- {outputPath: trained_model}
@@ -1,33 +0,0 @@
# PyTorch Efficient Training Examples
This folder provides PyTorch efficient training examples using ResNet-50 and ImageNet data.
## Requirements
```shell
pip install --upgrade pip
pip install -r requirements.txt
```
## Description
* resnet.py - Train ResNet-50 on single GPU.
* resnet_dp.py - Train ResNet-50 on single node multiple GPUs with `DataParallel` strategy.
* resnet_ddp.py - Train ResNet-50 on single node multiple GPUs with `DistributedDataParallel` strategy.
* resnet_ddp_wds.py - Train ResNet-50 on single node multiple GPUs with `DistributedDataParallel` strategy and `Webdataset`.
* resnet_fsdp.py - Train ResNet-50 on single node multiple GPUs with `FullyShardedDataParallel` strategy.
* resnet_fsdp_wds.py - Train ResNet-50 on single node multiple GPUs with `FullyShardedDataParallel` strategy and `Webdataset`.
* shard_imagenet.py - Shard ImagNet individual files into `tar` files.
## Benchmark
When run the benchmark on Nvidia T4 GPUs using ImageNet validation dataset, you can get the result like:
Strategy | Seconds/Epoch - Local Data | Seconds/Epoch - Cloud Data
---------------------- | -------------------------- | --------------------------
On 1 GPU | 489 | 804 (2x slower)
On 4 GPUs (DP) | 157 | 738 (5x slower)
On 4 GPUs (DDP) | 134 | 432 (3x slower)
On 4 GPUs (DDP + WDS) | 131 | 133 (same performance)
On 4 GPUs (FSDP) | 139 | 353 (3x slower)
On 4 GPUs (FSDP + WDS) | 138 | 135 (same performance)
@@ -1 +0,0 @@
webdataset == 0.2.26
@@ -1,197 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on single GPU."""
import argparse
import time
from PIL import Image
import torch
from torch import nn
import torchmetrics
import torchvision
from torchvision.models import resnet50
class ImageFolder(torchvision.datasets.ImageFolder):
"""Class for loading imagenet."""
def __init__(self, image_list_file, transform=None, target_transform=None):
self.samples = self._make_dataset(image_list_file)
self.loader = self._loader
self.imgs = self.samples
self.targets = [s[1] for s in self.samples]
self.transform = transform
self.target_transform = target_transform
def _make_dataset(self, image_list_file):
items = []
with open(image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
return items
def _loader(self, image_path):
with open(image_path, 'rb') as f:
img = Image.open(f)
img = img.convert('RGB')
return img
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image, target = image.to(device), target.to(device)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image, target = image.to(device), target.to(device)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def run_training(args):
"""Run training and evaluation."""
# Create model.
model = resnet50(weights=None)
model = model.to(args.device)
# Create train dataloader.
train_dataset = ImageFolder(
image_list_file=args.train_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.RandomResizedCrop(224),
torchvision.transforms.RandomHorizontalFlip(),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
train_dataloader = torch.utils.data.DataLoader(
dataset=train_dataset,
batch_size=args.train_batch_size,
shuffle=True,
num_workers=args.dataloader_num_workers,
pin_memory=True)
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
f'num workers: {train_dataloader.num_workers}, '
f'batch size: {args.train_batch_size}, '
f'batches/epoch: {len(train_dataloader)}')
# Create eval dataloader.
eval_dataset = ImageFolder(
image_list_file=args.eval_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.Resize(256),
torchvision.transforms.CenterCrop(224),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
eval_dataloader = torch.utils.data.DataLoader(
dataset=eval_dataset,
batch_size=args.eval_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
drop_last=True)
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
f'num workers: {eval_dataloader.num_workers}, '
f'batch size: {args.eval_batch_size}, '
f'batches/epoch: {len(eval_dataloader)}')
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
print(f'Running epoch {epoch}')
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--epochs',
default=1,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation')
args = parser.parse_args()
return args
def main():
args = create_args()
args.device = torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')
print('Launch job on 1 GPU')
run_training(args)
if __name__ == '__main__':
main()
@@ -1,234 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on multiple GPUs with DDP."""
import argparse
import os
import time
from PIL import Image
import torch
from torch import nn
import torch.distributed as dist
import torch.multiprocessing as mp
import torchmetrics
import torchvision
from torchvision.models import resnet50
class ImageFolder(torchvision.datasets.ImageFolder):
"""Class for loading imagenet."""
def __init__(self, image_list_file, transform=None, target_transform=None):
self.samples = self._make_dataset(image_list_file)
self.loader = self._loader
self.imgs = self.samples
self.targets = [s[1] for s in self.samples]
self.transform = transform
self.target_transform = target_transform
def _make_dataset(self, image_list_file):
items = []
with open(image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
return items
def _loader(self, image_path):
with open(image_path, 'rb') as f:
img = Image.open(f)
img = img.convert('RGB')
return img
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def worker(gpu, args):
"""Run training and evaluation."""
# Init process group.
print(f'Initiating process {gpu}')
dist.init_process_group(
backend='nccl',
init_method='env://',
world_size=args.gpus,
rank=gpu)
# Create model.
model = resnet50(weights=None)
torch.cuda.set_device(gpu)
model.to(args.device)
model = torch.nn.SyncBatchNorm.convert_sync_batchnorm(model)
model = nn.parallel.DistributedDataParallel(model, device_ids=[gpu])
# Create train dataloader.
train_dataset = ImageFolder(
image_list_file=args.train_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.RandomResizedCrop(224),
torchvision.transforms.RandomHorizontalFlip(),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
train_sampler = torch.utils.data.distributed.DistributedSampler(
train_dataset, num_replicas=args.gpus, rank=gpu)
train_dataloader = torch.utils.data.DataLoader(
dataset=train_dataset,
batch_size=args.train_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
sampler=train_sampler)
if gpu == 0:
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
f'num workers: {train_dataloader.num_workers}, '
f'global batch size: {args.train_batch_size * args.gpus}, '
f'batches/epoch: {len(train_dataloader)}')
# Create eval dataloader.
eval_dataset = ImageFolder(
image_list_file=args.eval_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.Resize(256),
torchvision.transforms.CenterCrop(224),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
eval_sampler = torch.utils.data.distributed.DistributedSampler(
eval_dataset, num_replicas=args.gpus, rank=gpu)
eval_dataloader = torch.utils.data.DataLoader(
dataset=eval_dataset,
batch_size=args.eval_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
drop_last=True,
sampler=eval_sampler)
if gpu == 0:
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
f'num workers: {eval_dataloader.num_workers}, '
f'batch size: {args.eval_batch_size}, '
f'batches/epoch: {len(eval_dataloader)}')
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
if gpu == 0:
print(f'Running epoch {epoch}')
train_sampler.set_epoch(epoch)
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
if gpu == 0:
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
if gpu == 0:
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
if gpu == 0:
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=1,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
args = parser.parse_args()
return args
def main():
args = create_args()
os.environ['MASTER_ADDR'] = 'localhost'
os.environ['MASTER_PORT'] = '8888'
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
print(f'Launch job on {args.gpus} GPUs with DDP')
mp.spawn(worker, nprocs=args.gpus, args=(args,))
if __name__ == '__main__':
main()
@@ -1,249 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on multiple GPUs with DDP."""
import argparse
import functools
import itertools
import math
import os
import time
import torch
from torch import nn
import torch.distributed as dist
import torch.multiprocessing as mp
import torchmetrics
from torchvision.models import resnet50
from torchvision.transforms import transforms
import webdataset as wds
def wds_split(src, rank, world_size):
"""Shards split function for webdataset."""
# The context of caller of this function is within multiple processes
# (by DDP world_size) and multiple workers (by dataloader_num_workers).
# So we totally have (world_size * num_workers) workers for processing data.
# NOTE: Raw data should be sharded to enough shards to make sure one process
# can handle at least one shard, otherwise the process may hang.
worker_id = 0
num_workers = 1
worker_info = torch.utils.data.get_worker_info()
if worker_info:
worker_id = worker_info.id
num_workers = worker_info.num_workers
for s in itertools.islice(src, rank * num_workers + worker_id, None,
world_size * num_workers):
yield s
def identity(x):
return x
def create_wds_dataloader(rank, args, mode):
"""Create webdataset dataset and dataloader."""
if mode == 'train':
transform = transforms.Compose([
transforms.RandomResizedCrop(224),
transforms.RandomHorizontalFlip(),
transforms.ToTensor(),
transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
])
data_path = args.train_data_path
data_size = args.train_data_size
batch_size_local = args.train_batch_size
batch_size_global = args.train_batch_size * args.gpus
# Since webdataset disallows partial batch, we pad the last batch for train.
batches = int(math.ceil(data_size / batch_size_global))
else:
transform = transforms.Compose([
transforms.Resize(256),
transforms.CenterCrop(224),
transforms.ToTensor(),
transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
])
data_path = args.eval_data_path
data_size = args.eval_data_size
batch_size_local = args.eval_batch_size
batch_size_global = args.eval_batch_size * args.gpus
# Since webdataset disallows partial batch, we drop the last batch for eval.
batches = int(data_size / batch_size_global)
dataset = wds.DataPipeline(
wds.SimpleShardList(data_path),
functools.partial(wds_split, rank=rank, world_size=args.gpus),
wds.tarfile_to_samples(),
wds.decode('pil'),
wds.to_tuple('jpg;png;jpeg cls'),
wds.map_tuple(transform, identity),
wds.batched(batch_size_local, partial=False),
)
num_workers = args.dataloader_num_workers
dataloader = wds.WebLoader(
dataset=dataset,
batch_size=None,
shuffle=False,
num_workers=num_workers,
persistent_workers=True if num_workers > 0 else False,
pin_memory=True).repeat(nbatches=batches)
print(f'{mode} dataloader | samples: {data_size}, '
f'num_workers: {num_workers}, '
f'local batch size: {batch_size_local}, '
f'global batch size: {batch_size_global}, '
f'batches: {batches}')
return dataloader
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def worker(gpu, args):
"""Run training and evaluation."""
# Init process group.
print(f'Initiating process {gpu}')
dist.init_process_group(
backend='nccl',
init_method='env://',
world_size=args.gpus,
rank=gpu)
# Create model.
model = resnet50(weights=None)
torch.cuda.set_device(gpu)
model.to(args.device)
model = torch.nn.SyncBatchNorm.convert_sync_batchnorm(model)
model = nn.parallel.DistributedDataParallel(model, device_ids=[gpu])
# Create dataloader.
train_dataloader = create_wds_dataloader(gpu, args, 'train')
eval_dataloader = create_wds_dataloader(gpu, args, 'eval')
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
if gpu == 0:
print(f'Running epoch {epoch}')
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
if gpu == 0:
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
if gpu == 0:
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
if gpu == 0:
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=1,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--train_data_size',
default=50000,
type=int,
help='data size for training')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
parser.add_argument(
'--eval_data_size',
default=50000,
type=int,
help='data size for evaluation')
args = parser.parse_args()
return args
def main():
args = create_args()
os.environ['MASTER_ADDR'] = 'localhost'
os.environ['MASTER_PORT'] = '8888'
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
print(f'Launch job on {args.gpus} GPUs with DDP')
mp.spawn(worker, nprocs=args.gpus, args=(args,))
if __name__ == '__main__':
main()
@@ -1,207 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on multiple GPUs with DP."""
import argparse
import time
from PIL import Image
import torch
from torch import nn
import torchmetrics
import torchvision
from torchvision.models import resnet50
class ImageFolder(torchvision.datasets.ImageFolder):
"""Class for loading imagenet."""
def __init__(self, image_list_file, transform=None, target_transform=None):
self.samples = self._make_dataset(image_list_file)
self.loader = self._loader
self.imgs = self.samples
self.targets = [s[1] for s in self.samples]
self.transform = transform
self.target_transform = target_transform
def _make_dataset(self, image_list_file):
items = []
with open(image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
return items
def _loader(self, image_path):
with open(image_path, 'rb') as f:
img = Image.open(f)
img = img.convert('RGB')
return img
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image, target = image.to(device), target.to(device)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image, target = image.to(device), target.to(device)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def run_training(args):
"""Run training and evaluation."""
# Create model.
model = resnet50(weights=None)
model = nn.DataParallel(model)
model = model.to(args.device)
# Create train dataloader.
train_dataset = ImageFolder(
image_list_file=args.train_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.RandomResizedCrop(224),
torchvision.transforms.RandomHorizontalFlip(),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
train_dataloader = torch.utils.data.DataLoader(
dataset=train_dataset,
batch_size=args.train_batch_size,
shuffle=True,
num_workers=args.dataloader_num_workers,
pin_memory=True)
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
f'num workers: {train_dataloader.num_workers}, '
f'global batch size: {args.train_batch_size}, '
f'batches/epoch: {len(train_dataloader)}')
# Create eval dataloader.
eval_dataset = ImageFolder(
image_list_file=args.eval_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.Resize(256),
torchvision.transforms.CenterCrop(224),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
eval_dataloader = torch.utils.data.DataLoader(
dataset=eval_dataset,
batch_size=args.eval_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
drop_last=True)
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
f'num workers: {eval_dataloader.num_workers}, '
f'global batch size: {args.eval_batch_size}, '
f'batches/epoch: {len(eval_dataloader)}')
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
print(f'Running epoch {epoch}')
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=1,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
args = parser.parse_args()
return args
def main():
args = create_args()
args.device = torch.device('cuda:0' if torch.cuda.is_available() else 'cpu')
args.train_batch_size *= args.gpus
args.eval_batch_size *= args.gpus
args.dataloader_num_workers *= args.gpus
print(f'Launch job on {args.gpus} GPU with nn.DataParallel')
run_training(args)
if __name__ == '__main__':
main()
@@ -1,242 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Train resnet on multiple GPUs with FSDP."""
import argparse
import functools
import os
import time
from PIL import Image
import torch
from torch import nn
import torch.distributed as dist
from torch.distributed.fsdp import FullyShardedDataParallel as FSDP
from torch.distributed.fsdp.wrap import size_based_auto_wrap_policy
import torch.multiprocessing as mp
import torchmetrics
import torchvision
from torchvision.models import resnet50
class ImageFolder(torchvision.datasets.ImageFolder):
"""Class for loading imagenet."""
def __init__(self, image_list_file, transform=None, target_transform=None):
self.samples = self._make_dataset(image_list_file)
self.loader = self._loader
self.imgs = self.samples
self.targets = [s[1] for s in self.samples]
self.transform = transform
self.target_transform = target_transform
def _make_dataset(self, image_list_file):
items = []
with open(image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
return items
def _loader(self, image_path):
with open(image_path, 'rb') as f:
img = Image.open(f)
img = img.convert('RGB')
return img
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def worker(gpu, args):
"""Run training and evaluation."""
# Init process group.
print(f'Initiating process {gpu}')
dist.init_process_group(
backend='nccl',
init_method='env://',
world_size=args.gpus,
rank=gpu)
# Create train dataloader.
train_dataset = ImageFolder(
image_list_file=args.train_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.RandomResizedCrop(224),
torchvision.transforms.RandomHorizontalFlip(),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
train_sampler = torch.utils.data.distributed.DistributedSampler(
train_dataset, num_replicas=args.gpus, rank=gpu)
train_dataloader = torch.utils.data.DataLoader(
dataset=train_dataset,
batch_size=args.train_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
sampler=train_sampler)
if gpu == 0:
print(f'Train dataloader | samples: {len(train_dataloader.dataset)}, '
f'num workers: {train_dataloader.num_workers}, '
f'global batch size: {args.train_batch_size * args.gpus}, '
f'batches/epoch: {len(train_dataloader)}')
# Create eval dataloader.
eval_dataset = ImageFolder(
image_list_file=args.eval_data_path,
transform=torchvision.transforms.Compose([
torchvision.transforms.Resize(256),
torchvision.transforms.CenterCrop(224),
torchvision.transforms.ToTensor(),
torchvision.transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
]))
eval_sampler = torch.utils.data.distributed.DistributedSampler(
eval_dataset, num_replicas=args.gpus, rank=gpu)
eval_dataloader = torch.utils.data.DataLoader(
dataset=eval_dataset,
batch_size=args.eval_batch_size,
shuffle=False,
num_workers=args.dataloader_num_workers,
pin_memory=True,
drop_last=True,
sampler=eval_sampler)
if gpu == 0:
print(f'Eval dataloader | samples: {len(eval_dataloader.dataset)}, '
f'num workers: {eval_dataloader.num_workers}, '
f'batch size: {args.eval_batch_size}, '
f'batches/epoch: {len(eval_dataloader)}')
# Wrap policy.
my_auto_wrap_policy = functools.partial(
size_based_auto_wrap_policy, min_num_params=100)
torch.cuda.set_device(gpu)
# Create model.
model = resnet50(weights=None)
model.to(args.device)
model = FSDP(model, auto_wrap_policy=my_auto_wrap_policy)
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
if gpu == 0:
print(f'Running epoch {epoch}')
train_sampler.set_epoch(epoch)
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
if gpu == 0:
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
if gpu == 0:
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
if gpu == 0:
print('Done')
dist.destroy_process_group()
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=2,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
args = parser.parse_args()
return args
def main():
args = create_args()
os.environ['MASTER_ADDR'] = 'localhost'
os.environ['MASTER_PORT'] = '8888'
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
print(f'Launch job on {args.gpus} GPUs with FSDP')
mp.spawn(worker, nprocs=args.gpus, args=(args,))
if __name__ == '__main__':
main()
@@ -1,240 +0,0 @@
"""Train resnet on multiple GPUs with DDP."""
import argparse
import functools
import itertools
import math
import os
import time
import torch
from torch import nn
import torch.distributed as dist
from torch.distributed.fsdp import FullyShardedDataParallel as FSDP
from torch.distributed.fsdp.wrap import size_based_auto_wrap_policy
import torch.multiprocessing as mp
import torchmetrics
from torchvision.models import resnet50
from torchvision.transforms import transforms
import webdataset as wds
def wds_split(src, rank, world_size):
"""Shards split function for webdataset."""
# The context of caller of this function is within multiple processes
# (by DDP world_size) and multiple workers (by dataloader_num_workers).
# So we totally have (world_size * num_workers) workers for processing data.
# NOTE: Raw data should be sharded to enough shards to make sure one process
# can handle at least one shard, otherwise the process may hang.
worker_id = 0
num_workers = 1
worker_info = torch.utils.data.get_worker_info()
if worker_info:
worker_id = worker_info.id
num_workers = worker_info.num_workers
for s in itertools.islice(src, rank * num_workers + worker_id, None,
world_size * num_workers):
yield s
def identity(x):
return x
def create_wds_dataloader(rank, args, mode):
"""Create webdataset dataset and dataloader."""
if mode == 'train':
transform = transforms.Compose([
transforms.RandomResizedCrop(224),
transforms.RandomHorizontalFlip(),
transforms.ToTensor(),
transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
])
data_path = args.train_data_path
data_size = args.train_data_size
batch_size_local = args.train_batch_size
batch_size_global = args.train_batch_size * args.gpus
# Since webdataset disallows partial batch, we pad the last batch for train.
batches = int(math.ceil(data_size / batch_size_global))
else:
transform = transforms.Compose([
transforms.Resize(256),
transforms.CenterCrop(224),
transforms.ToTensor(),
transforms.Normalize(
mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]),
])
data_path = args.eval_data_path
data_size = args.eval_data_size
batch_size_local = args.eval_batch_size
batch_size_global = args.eval_batch_size * args.gpus
# Since webdataset disallows partial batch, we drop the last batch for eval.
batches = int(data_size / batch_size_global)
dataset = wds.DataPipeline(
wds.SimpleShardList(data_path),
functools.partial(wds_split, rank=rank, world_size=args.gpus),
wds.tarfile_to_samples(),
wds.decode('pil'),
wds.to_tuple('jpg;png;jpeg cls'),
wds.map_tuple(transform, identity),
wds.batched(batch_size_local, partial=False),
)
num_workers = args.dataloader_num_workers
dataloader = wds.WebLoader(
dataset=dataset,
batch_size=None,
shuffle=False,
num_workers=num_workers,
persistent_workers=True if num_workers > 0 else False,
pin_memory=True).repeat(nbatches=batches)
print(f'{mode} dataloader | samples: {data_size}, '
f'num_workers: {num_workers}, '
f'local batch size: {batch_size_local}, '
f'global batch size: {batch_size_global}, '
f'batches: {batches}')
return dataloader
def train(model, device, dataloader, optimizer):
model.train()
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
# pred.shape (N, C), target.shape (N)
loss = nn.functional.cross_entropy(pred, target)
optimizer.zero_grad()
loss.backward()
optimizer.step()
return loss
def evaluate(model, device, dataloader, metric):
model.eval()
with torch.no_grad():
for image, target in dataloader:
image = image.to(device, non_blocking=True)
target = target.to(device, non_blocking=True)
pred = model(image)
metric.update(pred, target)
accuracy = metric.compute()
metric.reset()
return accuracy
def worker(gpu, args):
"""Run training and evaluation."""
# Init process group.
print(f'Initiating process {gpu}')
dist.init_process_group(
backend='nccl',
init_method='env://',
world_size=args.gpus,
rank=gpu)
# Create dataloader.
train_dataloader = create_wds_dataloader(gpu, args, 'train')
eval_dataloader = create_wds_dataloader(gpu, args, 'eval')
# Wrap policy.
my_auto_wrap_policy = functools.partial(
size_based_auto_wrap_policy, min_num_params=100)
torch.cuda.set_device(gpu)
# Create model.
model = resnet50(weights=None)
model.to(args.device)
model = FSDP(model, auto_wrap_policy=my_auto_wrap_policy)
# Optimizer.
optimizer = torch.optim.SGD(model.parameters(), 0.1)
# Main loop.
metric = torchmetrics.classification.Accuracy(top_k=1).to(args.device)
for epoch in range(1, args.epochs + 1):
if gpu == 0:
print(f'Running epoch {epoch}')
start = time.time()
train(model, args.device, train_dataloader, optimizer)
end = time.time()
if gpu == 0:
print(f'Training finished in {(end - start):>0.3f} seconds')
start = time.time()
evaluate(model, args.device, eval_dataloader, metric)
end = time.time()
if gpu == 0:
print(f'Evaluation finished in {(end - start):>0.3f} seconds')
if gpu == 0:
print('Done')
def create_args():
"""Create main args."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--gpus',
default=4,
type=int,
help='number of gpus to use')
parser.add_argument(
'--epochs',
default=2,
type=int,
help='number of total epochs to run')
parser.add_argument(
'--dataloader_num_workers',
default=2,
type=int,
help='number of workders for dataloader')
parser.add_argument(
'--train_data_path',
default='',
type=str,
help='path to training data')
parser.add_argument(
'--train_batch_size',
default=32,
type=int,
help='batch size for training per gpu')
parser.add_argument(
'--train_data_size',
default=50000,
type=int,
help='data size for training')
parser.add_argument(
'--eval_data_path',
default='',
type=str,
help='path to evaluation data')
parser.add_argument(
'--eval_batch_size',
default=32,
type=int,
help='batch size for evaluation per gpu')
parser.add_argument(
'--eval_data_size',
default=50000,
type=int,
help='data size for evaluation')
args = parser.parse_args()
return args
def main():
args = create_args()
os.environ['MASTER_ADDR'] = 'localhost'
os.environ['MASTER_PORT'] = '8888'
args.device = 'cuda' if torch.cuda.is_available() else 'cpu'
print(f'Launch job on {args.gpus} GPUs with FSDP')
mp.spawn(worker, nprocs=args.gpus, args=(args,))
if __name__ == '__main__':
main()
@@ -1,98 +0,0 @@
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the \"License\");
# you may not use this file except in compliance with the License.\n",
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an \"AS IS\" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
r"""Main function to shard ImageNet dataset.
Example usage:
python3 -u shard_imagenet.py \
--image_list_file=/home/jupyter/data/imagenet/train_list.txt \
--output_pattern=/home/jupyter/data/imagenet/validation-%06d.tar
"""
import argparse
import os
import random
import webdataset as wds # version: 0.2.26
# NOTE: only supports writing to local path,
# need gcsfuse mounting if want to write to gcs bucket.
def write_shards(args):
"""Shard individual data files."""
output_dir = os.path.dirname(args.output_pattern)
if not os.path.isdir(output_dir):
os.makedirs(output_dir)
items = []
# Image list file is a text file, each line is a pair (image_path, label).
with open(args.image_list_file, 'r') as f:
for line in f:
item = line.strip().split(' ')
items.append((item[0], int(item[1])))
# Shuffle items to avoid any large sequences of a single class
# in the dataset.
random.shuffle(items)
def _read_image(image_path):
with open(image_path, 'rb') as f:
return f.read()
with wds.ShardWriter(pattern=args.output_pattern,
maxcount=args.max_images_per_shard,
maxsize=args.max_bytes_per_shard) as sink:
for i, (image_path, target) in enumerate(items):
key = str(i)
image = _read_image(image_path)
sample = {'__key__': key, 'jpg': image, 'cls': target}
sink.write(sample)
if len(items) != sink.total:
raise ValueError('Items read {} != items written {}'.format(
len(items), sink.total))
def create_args():
"""Creates arg parser."""
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--image_list_file',
default='',
type=str,
help='path to image list file')
parser.add_argument(
'--output_pattern',
default='',
type=str,
help='the pattern for output shards, like /path/to/train-%06d.tar')
parser.add_argument(
'--max_images_per_shard',
default=10 * 1024,
type=int,
help='max number of images per shard')
parser.add_argument(
'--max_bytes_per_shard',
default=300 * 1024 * 1024,
type=int,
help='max bytes per shard')
args = parser.parse_args()
return args
def main():
args = create_args()
write_shards(args)
if __name__ == '__main__':
main()
@@ -1,30 +0,0 @@
# PyTorch Deployment on Google Cloud: Text Classification
**This is an Experimental release**, covered by the Pre-GA Offerings Terms of your Google Cloud Platform [Terms of Service](https://cloud.google.com/terms).
Experiments are focused on validating a prototype and are not guaranteed to be released. They are not intended for production use or covered by any SLA, support obligation, or deprecation policy and might be subject to backward-incompatible changes.
**Kindly drop us a note before you run any scale tests.**
**Do not hesitate to contact vertexai-prediction-preview-feedback@google.com if you have any questions or run into any issues.**
The projects need to be added to the allowlist in order to deploy PyTorch models using Vertex AI Prediction pre-built PyTorch images. If you are interested in the feature, please send an email to vertexai-prediction-preview-feedback@google.com to provide your project numbers OR project ids.
## Overview
In the PyTorch on Google Cloud series of blog posts, we aim to share how to deploy PyTorch models at scale on [Vertex AI](https://cloud.google.com/vertex-ai).
This tutorial on text classification shows how to deploy a PyTorch based text classification model on [Vertex AI](https://cloud.google.com/vertex-ai/docs/start/client-libraries#python) using Vertex SDK and [`gcloud ai`](https://cloud.google.com/sdk/gcloud/reference/beta/ai).
## Notebooks
| <h4>Notebook</h4> | <h4>Description</h4> |
| :-------- | :------- |
| [pytorch-text-classification-vertex-ai-deploy.ipynb](./pytorch-text-classification-vertex-ai-deploy.ipynb) | Notebook to show deploying a PyTorch model on Vertex AI |
## Folders
| <h4>Folder Name</h4> | <h4>Description</h4> |
| :-------- | :------- |
| [`predictor`](./predictor) | Folder with custom prediction handler to deploy a PyTorch model to Vertex Prediction. In the [notebook](./pytorch-text-classification-vertex-ai-deploy.ipynb), this folder is used for deploying a PyTorch model on Vertex AI using Vertex Prediction pre-built PyTorch images |
@@ -1,91 +0,0 @@
import os
import json
import logging
import torch
from transformers import AutoModelForSequenceClassification, AutoTokenizer
from ts.torch_handler.base_handler import BaseHandler
logger = logging.getLogger(__name__)
class TransformersClassifierHandler(BaseHandler):
"""
The handler takes an input string and returns the classification text
based on the serialized transformers checkpoint.
"""
def __init__(self):
super(TransformersClassifierHandler, self).__init__()
self.initialized = False
def initialize(self, ctx):
""" Loads the model.pt file and initialized the model object.
Instantiates Tokenizer for preprocessor to use
Loads labels to name mapping file for post-processing inference response
"""
self.manifest = ctx.manifest
properties = ctx.system_properties
model_dir = properties.get("model_dir")
self.device = torch.device("cuda:" + str(properties.get("gpu_id")) if torch.cuda.is_available() else "cpu")
# Read model serialize/pt file
serialized_file = self.manifest["model"]["serializedFile"]
model_pt_path = os.path.join(model_dir, serialized_file)
if not os.path.isfile(model_pt_path):
raise RuntimeError("Missing the model.pt or pytorch_model.bin file")
# Load model
self.model = AutoModelForSequenceClassification.from_pretrained(model_dir)
self.model.to(self.device)
self.model.eval()
logger.debug('Transformer model from path {0} loaded successfully'.format(model_dir))
# Ensure to use the same tokenizer used during training
self.tokenizer = AutoTokenizer.from_pretrained('bert-base-cased')
# Read the mapping file, index to object name
mapping_file_path = os.path.join(model_dir, "index_to_name.json")
if os.path.isfile(mapping_file_path):
with open(mapping_file_path) as f:
self.mapping = json.load(f)
else:
logger.warning('Missing the index_to_name.json file. Inference output will default.')
self.mapping = {"0": "Negative", "1": "Positive"}
self.initialized = True
def preprocess(self, data):
""" Preprocessing input request by tokenizing
Extend with your own preprocessing steps as needed
"""
text = data[0].get("data")
if text is None:
text = data[0].get("body")
sentences = text.decode('utf-8')
logger.info("Received text: '%s'", sentences)
# Tokenize the texts
tokenizer_args = ((sentences,))
inputs = self.tokenizer(*tokenizer_args,
padding='max_length',
max_length=128,
truncation=True,
return_tensors = "pt")
return inputs
def inference(self, inputs):
""" Predict the class of a text using a trained transformer model.
"""
prediction = self.model(inputs['input_ids'].to(self.device))[0].argmax().item()
if self.mapping:
prediction = self.mapping[str(prediction)]
logger.info("Model predicted: '%s'", prediction)
return [prediction]
def postprocess(self, inference_output):
return inference_output
@@ -1,5 +0,0 @@
{
"0": "Negative",
"1": "Positive"
}
-102
View File
@@ -1,102 +0,0 @@
# Administrative Howto notes on CI Notebook Ingestion
This readme covers administrative actions that are performed on an as-needed basis.
## Team: vertex-ai-owners
Members of the vertex-ai-owners (git team) have administrative privileges.
### Viewing members
1. Goto the repo
2. From top-level menu, select: (Settings -> Collaborators and Teams)[https://github.com/GoogleCloudPlatform/vertex-ai-samples/settings/access]
### Adding a new member
If another member needs to be added:
- Have the new member make a request to join the team.
- vertex-ai-owners with the `Maintainer` tag may add the new member.
## Executing CI notebook ingestion checks on a PR
### Killing a stuck PR
If the CI notebook ingestion test is stuck (not terminating), you can kill the process by:
1. Goto the PR
2. Under checks, find the entry: vertex-ai-notebook-execution-test (python-docs-samples-tests) In progress —> Summary
3. Select Details
4. At bottom of details page, select: View more details on Google Cloud Build
5. In Cloud Build history page, select Cancel on the top menu bar.
### Restart a PR test
There are two ways to restart the CI notebook ingestion tests on an open PR.
1. In Cloud Build history page, select Rebuild on the top menu bar.
2. or, in a comment in the PR enter: /gcbrun
## Bypassing CI notebook ingestion checks on a PR
We strongly discourage this, unless there is a compelling reason that would impact the integrity of the quality process.
There are two ways of doing this. In both cases, you do:
1. Goto the repo
2. From top-level menu, select: (Settings -> Branches)[https://github.com/GoogleCloudPlatform/vertex-ai-samples/settings/branches]
3. Under Branch Protection Rules, select the `main` branch.
### Allowing a member to disable requirements for merging
Specific member(s) can be assigned the ability to override requirements and merge a PR, by:
1. Select Edit for the `main` branch in Branch Protection Rules.
2. Find the entry "Allow specified actors to bypass required pull requests".
3. Under this entry, add the member's git LDAP.
4. Select SAVE.
5. The "Squash and Merge" button will now be enabled on all PRs viewed by that member.
### Temporarily disable checks.
You can disable requirement checks temporarily on all PRs.
1. Select Edit for the `main` branch in Branch Protection Rules.
2. Uncheck:
- Require approvals
- Require review from Code Owners
- Require status checks to pass before merging
3. Select SAVE
4. Now all members will see a green "Squash and Merge" on all PRs viewed by that member.
To reverse, recheck the settings you unchecked above.
## Linting
To execute the identical lint image locally, from the CI notebook ingestion checks, do:
1. Goto the corresponding local folder in the repo.
2. Run: `docker run -v ${PWD}:/setup/app gcr.io/python-docs-samples-tests/notebook_linter:latest <your_notebooks>`
## Install dependency issues
Some packages (and combinations) have dependencies that fail on the virgin VM image used for the CI notebook ingestion test.
### TFDV
If the notebook installs and uses tensorflow_data_validation, install as follows:
! pip3 install -q {USER_FLAG} google-cloud-aiplatform \
tensorflow-data-validation \
protobuf==3.20.3
! pip3 install -q {USER_FLAG} cachetools==5.2.0
+3 -16
View File
@@ -7,37 +7,24 @@
/gapic @andrewferlitsch
/gapic/custom/showcase_custom_image_classification_online_explain_example_based_api.ipynb @inardini
/ml_ops @andrewferlitsch
/model_monitoring/* @andrewferlitsch
/model_monitoring/* @mco-gh
/structured_data/rapid_prototyping_* @rafael-carvalho
/managed_notebooks/
/bigquery_ml/ @polong
/sdk/SDK_FBProphet_Forecasting_Online.ipynb @brianchunkang
/pipelines/google_cloud_pipeline_components_TPU_model_train_upload_deploy.ipynb @brianchunkang
/explainable_ai/SDK_Custom_Container_XAI.ipynb @brianchunkang
/matching_engine/sdk_matching_engine_for_indexing.ipynb @ivanmkc
/matching_engine/matching_engine_for_indexing.ipynb @yinghsienwu
/matching_engine/stream_update_for_matching_engine.ipynb @peterping666
/sdk/pytorch_lightning_custom_container_training.ipynb @brianchunkang
/sdk/sdk_pytorch_torchrun_custom_container_training_imagenet.ipynb @brianchunkang
/tensorboard @yfang1
/feature_store @nayaknishant @morgandu
/prediction @googleapis/vertex-prediction-team
/vertex_endpoints/tf_hub_obj_detection/deploy_tfhub_object_detection_on_vertex_endpoints.ipynb @entrpn
/vertex_endpoints/find_ideal_machine_type/find_ideal_machine_type/find_ideal_machine_type.ipynb @entrpn
/vertex_endpoints/nvidia-triton/nvidia-triton-custom-container-prediction.ipynb @RajeshThallam
/vertex_endpoints/optimized_tensorflow_runtime @vlasenkoalexey
/notebooks/community/ml_ops/stage2/get_started_with_visionapi_and_automl.ipynb @mansari
/notebooks/community/neo4j/graph_paysim.ipynb @benofben @laeg
/notebooks/community/ml_ops/stage1/get_started_with_visionapi_and_vertex_datasets.ipynb @mansari
/notebooks/community/pipelines/google_cloud_pipeline_components_bqml_pipeline_demand_forecasting.ipynb @inardini
/notebooks/community/cohere/cohere_embedding_with_matching_engine.ipynb @stewart-co
/notebooks/community/ml_ops/stage2/get_started_vertex_hpt_r_kernel.ipynb @fhirschmann
/notebooks/community/ml_ops/stage2/get_started_vertex_training_r_using_r_kernel.ipynb @fhirschmann
/notebooks/community/vertex-ai-samples/notebooks/community/model_registry/vertex_ai_model_registry_bqml_custom_model_versioning.ipynb @inardini
/notebooks/community/vertex-ai-samples/notebooks/community/model_registry/vertex_ai_model_registry_automl_model_versioning.ipynb @inardini
/notebooks/community/vizier/conversions_vertex_vizier_and_open_source_vizier.ipynb @halio-g
/notebooks/community/experiments/vertex_ai_model_experimentation.ipynb @inardini @asobran
/notebooks/community/pipelines/google_cloud_pipeline_components_bqml_pipeline_anomaly_detection.ipynb @inardini
/notebooks/community/pipelines/google_cloud_pipeline_components_cloud_natural_language_pipeline.ipynb @Narwhalprime
/notebooks/community/pipelines/google_cloud_pipeline_components_ready_to_go_text_classification_pipeline.ipynb @Narwhalprime
/notebooks/community/pipelines/google_cloud_pipeline_components_bqml_pipeline_demand_forecasting.ipynb @inardini
@@ -29,23 +29,21 @@
"id": "JAPoU8Sm5E6e"
},
"source": [
"# Online prediction with BigQuery ML\n",
"\n",
"<table align=\"left\">\n",
"\n",
" <td>\n",
" <a href=\"https://colab.research.google.com/github/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/official/bigquery_ml/bqml-online-prediction.ipynb\">\n",
" <a href=\"https://colab.research.google.com/github/GoogleCloudPlatform/vertex-ai-samples/blob/master/notebooks/community/bigquery_ml/bqml-online-prediction.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/colab-logo-32px.png\" alt=\"Colab logo\"> Run in Colab\n",
" </a>\n",
" </td>\n",
" <td>\n",
" <a href=\"https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/official/bigquery_ml/bqml-online-prediction.ipynb\">\n",
" <a href=\"https://github/GoogleCloudPlatform/vertex-ai-samples/blob/master/notebooks/community/bigquery_ml/bqml-online-prediction.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/github-logo-32px.png\" alt=\"GitHub logo\">\n",
" View on GitHub\n",
" </a>\n",
" </td>\n",
" <td>\n",
" <a href=\"https://console.cloud.google.com/vertex-ai/workbench/deploy-notebook?download_url=https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/notebooks/official/bigquery_ml/bqml-online-prediction.ipynb\">\n",
" <a href=\"https://console.cloud.google.com/vertex-ai/workbench/deploy-notebook?download_url=https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/blob/master/notebooks/community/bigquery_ml/bqml-online-prediction.ipynb\">\n",
" <img src=\"https://lh3.googleusercontent.com/UiNooY4LUgW_oTvpsNhPpQzsstV5W8F7rYgxgGBD85cWJoLmrOzhVs_ksK_vgx40SHs7jCqkTkCk=e14-rj-sc0xffffff-h130-w32\" alt=\"Vertex AI logo\">\n",
" Open in Vertex AI Workbench\n",
" </a>\n",
@@ -56,25 +54,20 @@
{
"cell_type": "markdown",
"metadata": {
"id": "cfc112ddad4c"
"id": "tvgnzT1CKxrO"
},
"source": [
"## Overview\n",
"\n",
"This notebook is aimed at data analysts and data scientists who have data in BigQuery, want to train a model using BigQuery ML, register the model to Vertex AI Model Registry, and deploy it to an endpoint for real-time prediction. \n",
"\n",
"Learn more about [BigQuery ML](https://cloud.google.com/vertex-ai/docs/beginner/bqml)."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "tvgnzT1CKxrO"
},
"source": [
"### Dataset\n",
"\n",
"The dataset, [available publicly on BigQuery](https://console.cloud.google.com/bigquery?project=bigquery-public-data&d=ga4_obfuscated_sample_ecommerce&p=bigquery-public-data&page=dataset), comes from obfuscated [Google Analytics 4 data](https://support.google.com/analytics/answer/10937659) from the [Google Merchandise Store](https://shop.googlemerchandisestore.com/).\n",
"\n",
"### Objective\n",
"\n",
"In this tutorial, you learn how to train and deploy a churn prediction model for real-time inference, with the data in BigQuery and model trained using BigQuery ML, registered to Vertex AI Model Registry, and deployed to an endpoint on Vertex AI for online predictions.\n",
"In this tutorial, you will learn how to train and deploy a churn prediction model for real-time inference, with the data in BigQuery and model trained using BigQuery ML, registered to Vertex AI Model Registry, and deployed to an endpoint on Vertex AI for online predictions.\n",
"\n",
"This tutorial uses the following Google Cloud data analytics and ML services:\n",
"\n",
@@ -91,26 +84,8 @@
"- Training a classification model using BigQuery ML and registering it to Vertex AI Model Registry\n",
"- Inspecting the model on Vertex AI Model Registry\n",
"- Deploying the model to an endpoint on Vertex AI\n",
"- Making sample online predictions to the model endpoint\n"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "c640527e06e6"
},
"source": [
"### Dataset\n",
"- Making sample online predictions to the model endpoint\n",
"\n",
"The dataset, <a href=\"https://console.cloud.google.com/bigquery?project=bigquery-public-data&d=ga4_obfuscated_sample_ecommerce&p=bigquery-public-data&page=dataset\" target=\"_blank\">available publicly on BigQuery</a>, comes from obfuscated <a href=\"https://support.google.com/analytics/answer/10937659\" target=\"_blank\">Google Analytics 4 data</a> from the <a href=\"https://shop.googlemerchandisestore.com/\" target=\"_blank\">Google Merchandise Store</a>)."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "ff6017ac879f"
},
"source": [
"### Costs \n",
"\n",
"This tutorial uses billable components of Google Cloud:\n",
@@ -120,9 +95,9 @@
"* Vertex AI\n",
"\n",
"\n",
"Learn about <a href=\"https://cloud.google.com/bigquery/pricing\" target=\"_blank\">BigQuery Pricing</a>, <a href=\"https://cloud.google.com/bigquery-ml/pricing\" target=\"_blank\">BigQuery ML pricing</a>, <a href=\"https://cloud.google.com/vertex-ai/pricing\" target=\"_blank\">Vertex AI\n",
"pricing</a>, and use the <a href=\"https://cloud.google.com/products/calculator/\" target=\"_blank\">Pricing\n",
"Calculator</a>\n",
"Learn about [BigQuery Pricing](https://cloud.google.com/bigquery/pricing), [BigQuery ML pricing](https://cloud.google.com/bigquery-ml/pricing), [Vertex AI\n",
"pricing](https://cloud.google.com/vertex-ai/pricing), and use the [Pricing\n",
"Calculator](https://cloud.google.com/products/calculator/)\n",
"to generate a cost estimate based on your projected usage."
]
},
@@ -153,18 +128,18 @@
"* virtualenv\n",
"* Jupyter notebook running in a virtual environment with Python 3\n",
"\n",
"The Google Cloud guide to <a href=\"https://cloud.google.com/python/setup\" target=\"_blank\">Setting up a Python development\n",
"environment</a> and the <a href=\"https://jupyter.org/install\" target=\"_blank\">Jupyter\n",
"installation guide</a> provide detailed instructions\n",
"The Google Cloud guide to [Setting up a Python development\n",
"environment](https://cloud.google.com/python/setup) and the [Jupyter\n",
"installation guide](https://jupyter.org/install) provide detailed instructions\n",
"for meeting these requirements. The following steps provide a condensed set of\n",
"instructions:\n",
"\n",
"1. <a href=\"https://cloud.google.com/sdk/docs/\" target=\"_blank\">Install and initialize the Cloud SDK.</a>\n",
"1. [Install and initialize the Cloud SDK.](https://cloud.google.com/sdk/docs/)\n",
"\n",
"1. <a href=\"https://cloud.google.com/python/setup#installing_python\" target=\"_blank\">Install Python 3.</a>\n",
"1. [Install Python 3.](https://cloud.google.com/python/setup#installing_python)\n",
"\n",
"1. <a href=\"https://cloud.google.com/python/setup#installing_and_using_virtualenv\" target=\"_blank\">Install\n",
" virtualenv</a>\n",
"1. [Install\n",
" virtualenv](https://cloud.google.com/python/setup#installing_and_using_virtualenv)\n",
" and create a virtual environment that uses Python 3. Activate the virtual environment.\n",
"\n",
"1. To install Jupyter, run `pip3 install jupyter` on the\n",
@@ -259,13 +234,13 @@
"\n",
"**The following steps are required, regardless of your notebook environment.**\n",
"\n",
"1. <a href=\"https://console.cloud.google.com/cloud-resource-manager\" target=\"_blank\">Select or create a Google Cloud project</a>. When you first create an account, you get a $300 free credit towards your compute/storage costs.\n",
"1. [Select or create a Google Cloud project](https://console.cloud.google.com/cloud-resource-manager). When you first create an account, you get a $300 free credit towards your compute/storage costs.\n",
"\n",
"1. <a href=\"https://cloud.google.com/billing/docs/how-to/modify-project\" target=\"_blank\">Make sure that billing is enabled for your project</a>.\n",
"1. [Make sure that billing is enabled for your project](https://cloud.google.com/billing/docs/how-to/modify-project).\n",
"\n",
"1. <a href=\"https://console.cloud.google.com/flows/enableapi?apiid=aiplatform.googleapis.com\" target=\"_blank\">Enable the Vertex AI API</a>.\n",
"1. [Enable the Vertex AI API](https://console.cloud.google.com/flows/enableapi?apiid=aiplatform.googleapis.com).\n",
"\n",
"1. If you are running this notebook locally, you will need to install the <a href=\"https://cloud.google.com/sdk\" target=\"_blank\">Cloud SDK</a>.\n",
"1. If you are running this notebook locally, you will need to install the [Cloud SDK](https://cloud.google.com/sdk).\n",
"\n",
"1. Enter your project ID in the cell below. Then run the cell to make sure the\n",
"Cloud SDK uses the right project for all the commands in this notebook.\n",
@@ -284,17 +259,6 @@
"**If you don't know your project ID**, you may be able to get your project ID using `gcloud`."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "3c8049930470"
},
"outputs": [],
"source": [
"PROJECT_ID = \"[your-project-id]\" # @param {type:\"string\"}"
]
},
{
"cell_type": "code",
"execution_count": null,
@@ -303,11 +267,15 @@
},
"outputs": [],
"source": [
"if PROJECT_ID == \"\" or PROJECT_ID is None or PROJECT_ID == \"[your-project-id]\":\n",
" # Get your GCP project id from gcloud\n",
" shell_output = ! gcloud config list --format 'value(core.project)' 2>/dev/null\n",
"PROJECT_ID = \"YOUR-PROJECT-ID\"\n",
"\n",
"# Get your Google Cloud project ID from gcloud\n",
"import os\n",
"\n",
"if not os.getenv(\"IS_TESTING\"):\n",
" shell_output = !gcloud config list --format 'value(core.project)' 2>/dev/null\n",
" PROJECT_ID = shell_output[0]\n",
" print(\"Project ID:\", PROJECT_ID)"
" print(\"Project ID: \", PROJECT_ID)"
]
},
{
@@ -327,7 +295,8 @@
},
"outputs": [],
"source": [
"! gcloud config set project $PROJECT_ID"
"if PROJECT_ID == \"\" or PROJECT_ID is None:\n",
" PROJECT_ID = \"[your-project-id]\" # @param {type:\"string\"}"
]
},
{
@@ -345,9 +314,9 @@
"- Europe: `europe-west4`\n",
"- Asia Pacific: `asia-east1`\n",
"\n",
"You might not be able to use a multi-regional bucket for training with Vertex AI. Not all regions provide support for all Vertex AI services.\n",
"You may not use a multi-regional bucket for training with Vertex AI. Not all regions provide support for all Vertex AI services.\n",
"\n",
"Learn more about <a href=\"https://cloud.google.com/vertex-ai/docs/general/locations\" target=\"_blank\">Vertex AI regions</a>."
"Learn more about [Vertex AI regions](https://cloud.google.com/vertex-ai/docs/general/locations)."
]
},
{
@@ -370,9 +339,9 @@
"id": "06571eb4063b"
},
"source": [
"#### UUID\n",
"#### Timestamp\n",
"\n",
"If you are in a live tutorial session, you might be using a shared test account or project. To avoid name collisions between users on resources created, you create a uuid for each instance session, and append it onto the name of resources you create in this tutorial."
"If you are in a live tutorial session, you might be using a shared test account or project. To avoid name collisions between users on resources created, you create a timestamp for each instance session, and append it onto the name of resources you create in this tutorial."
]
},
{
@@ -383,16 +352,9 @@
},
"outputs": [],
"source": [
"import random\n",
"import string\n",
"from datetime import datetime\n",
"\n",
"\n",
"# Generate a uuid of a specifed length(default=8)\n",
"def generate_uuid(length: int = 8) -> str:\n",
" return \"\".join(random.choices(string.ascii_lowercase + string.digits, k=length))\n",
"\n",
"\n",
"UUID = generate_uuid()"
"TIMESTAMP = datetime.now().strftime(\"%Y%m%d%H%M%S\")"
]
},
{
@@ -418,7 +380,8 @@
"\n",
"**Otherwise**, follow these steps:\n",
"\n",
"1. In the Cloud Console, go to the <a href=\"https://console.cloud.google.com/apis/credentials/serviceaccountkey\" target=\"_blank\">**Create service account key** page</a>.\n",
"1. In the Cloud Console, go to the [**Create service account key**\n",
" page](https://console.cloud.google.com/apis/credentials/serviceaccountkey).\n",
"\n",
"2. Click **Create service account**.\n",
"\n",
@@ -523,10 +486,7 @@
},
"outputs": [],
"source": [
"from typing import Union\n",
"\n",
"import google.cloud.aiplatform as vertex_ai\n",
"import pandas as pd\n",
"from google.cloud import bigquery"
]
},
@@ -590,17 +550,24 @@
"outputs": [],
"source": [
"# Wrapper to use BigQuery client to run query/job, return job ID or result as DF\n",
"def run_bq_query(sql: str) -> Union[str, pd.DataFrame]:\n",
"def bq_query(sql):\n",
" \"\"\"\n",
" Input: SQL query, as a string, to execute in BigQuery\n",
" Returns the query results as a pandas DataFrame, or error, if any\n",
" \"\"\"\n",
" # Import Exceptions library to help with dataset error catching\n",
" from google.cloud.exceptions import BadRequest\n",
"\n",
" # Try dry run before executing query to catch any errors\n",
" job_config = bigquery.QueryJobConfig(dry_run=True, use_query_cache=False)\n",
" bq_client.query(sql, job_config=job_config)\n",
" try:\n",
" job_config = bigquery.QueryJobConfig(dry_run=True, use_query_cache=False)\n",
"\n",
" bq_client.query(sql, job_config=job_config)\n",
"\n",
" except BadRequest as err:\n",
" print(err)\n",
" return\n",
"\n",
" # If dry run succeeds without errors, proceed to run query\n",
" job_config = bigquery.QueryJobConfig()\n",
" client_result = bq_client.query(sql, job_config=job_config)\n",
"\n",
@@ -622,7 +589,7 @@
"\n",
"BigQuery ML (BQML) provides the capability to train ML tabular models, such as classification, regression, forecasting, and matrix factorization, in BigQuery using SQL syntax directly. BigQuery ML uses the scalable infrastructure of BigQuery ML so you don't need to set up additional infrastructure for training or batch serving.\n",
"\n",
"Learn more about <a href=\"https://cloud.google.com/bigquery-ml/docs\" target=\"_blank\">BigQuery ML documentation</a>."
"Learn more about [BigQuery ML documentation](https://cloud.google.com/bigquery-ml/docs)."
]
},
{
@@ -633,13 +600,9 @@
},
"outputs": [],
"source": [
"BQ_DATASET_NAME = f\"ga4_churnprediction_{UUID}\"\n",
"BQ_DATASET_NAME = \"ga4_churnprediction\"\n",
"\n",
"sql_create_dataset = f\"\"\"CREATE SCHEMA IF NOT EXISTS {BQ_DATASET_NAME}\"\"\"\n",
"\n",
"print(sql_create_dataset)\n",
"\n",
"run_bq_query(sql_create_dataset)"
"bq_query(f\"\"\"CREATE SCHEMA IF NOT EXISTS {BQ_DATASET_NAME}\"\"\")"
]
},
{
@@ -657,7 +620,7 @@
"id": "49dd00d5fbe5"
},
"source": [
"Inpect data that has been pre-processed from <a href=\"https://support.google.com/analytics/answer/10937659\" target=\"_blank\">Google Analytics 4 data from the Google Merchandise Store</a> so that it can be used for classification. For more information on how this data was prepared, read <a href=\"https://cloud.google.com/blog/topics/developers-practitioners/churn-prediction-game-developers-using-google-analytics-4-ga4-and-bigquery-ml\" target=\"_blank\">this blog post</a>.\n",
"Inpect data that has been pre-processed from [Google Analytics 4 data from the Google Merchandise Store](https://support.google.com/analytics/answer/10937659) so that it can be used for classification. For more information on how this data was prepared, read [this blog post](https://cloud.google.com/blog/topics/developers-practitioners/churn-prediction-game-developers-using-google-analytics-4-ga4-and-bigquery-ml).\n",
"\n",
"As seen below, each row represents a single user, and the columns represent their demographic features, their aggregated behavioral features in the first 24 hours of visiting the Google Merchandise Store, and the label (whether the user churned or returned any time after the first 24 hours)."
]
@@ -678,7 +641,7 @@
"LIMIT\n",
" 100\n",
"\"\"\"\n",
"run_bq_query(sql_inspect)"
"bq_query(sql_inspect)"
]
},
{
@@ -699,9 +662,9 @@
"The query below trains a logistic regression model using BigQuery ML. BigQuery resources are used to train the model.\n",
"\n",
"In the `OPTIONS` parameter:\n",
"* with `model_registry=\"vertex_ai\"`, the BigQuery ML model will automatically be <a href=\"https://cloud.google.com/vertex-ai/docs/model-registry/model-registry-bqml\" target=\"_blank\">registered to Vertex AI Model Registry</a>, which enables you to view all of your registered models and its versions on Google Cloud in one place.\n",
"* with `model_registry=\"vertex_ai\"`, the BigQuery ML model will automatically be [registered to Vertex AI Model Registry](https://cloud.google.com/vertex-ai/docs/model-registry/model-registry-bqml), which enables you to view all of your registered models and its versions on Google Cloud in one place.\n",
"\n",
"* `vertex_ai_model_version_aliases allows you to set aliases to help you keep track of your model version (<a href=\"https://cloud.google.com/vertex-ai/docs/model-registry/model-alias\" target=\"_blank\">documentation</a>)."
"* `vertex_ai_model_version_aliases allows you to set aliases to help you keep track of your model version ([documentation](https://cloud.google.com/vertex-ai/docs/model-registry/model-alias))."
]
},
{
@@ -714,7 +677,7 @@
"source": [
"# this cell may take ~1 min to run\n",
"\n",
"BQML_MODEL_NAME = f\"bqml_model_churn_{UUID}\"\n",
"BQML_MODEL_NAME = \"bqmlmodelchurn\"\n",
"\n",
"sql_train_model_bqml = f\"\"\"\n",
"CREATE OR REPLACE MODEL {BQ_DATASET_NAME}.{BQML_MODEL_NAME} \n",
@@ -733,7 +696,7 @@
"\n",
"print(sql_train_model_bqml)\n",
"\n",
"run_bq_query(sql_train_model_bqml)"
"bq_query(sql_train_model_bqml)"
]
},
{
@@ -751,7 +714,7 @@
"id": "2aaaae772f67"
},
"source": [
"With the model created, you can now evaluate the logistic regression model. Behind the scenes, BigQuery ML automatically <a href=\"https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-create#data_split_method\" target=\"_blank\">split the data</a>, which makes it easier to quickly train and evaluate models."
"With the model created, you can now evaluate the logistic regression model. Behind the scenes, BigQuery ML automatically [split the data](https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-create#data_split_method), which makes it easier to quickly train and evaluate models."
]
},
{
@@ -771,7 +734,7 @@
"\n",
"print(sql_evaluate_model)\n",
"\n",
"run_bq_query(sql_evaluate_model)"
"bq_query(sql_evaluate_model)"
]
},
{
@@ -782,7 +745,7 @@
"source": [
"These metrics help you understand the performance of the model. \n",
"\n",
"There are various metrics for logistic regression and other model types (full list of metrics can be found in the <a href=\"https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-evaluate#mlevaluate_output\" target=\"_blank\">documentation</a>)."
"There are various metrics for logistic regression and other model types (full list of metrics can be found in the [documentation](https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-evaluate#mlevaluate_output))."
]
},
{
@@ -802,7 +765,7 @@
"source": [
"Make a batch prediction in BigQuery ML on the original training data to check the probability of churn for each of the users, as seen in the `probability` column, with the predicted label under the `predicted_churn` column.\n",
"\n",
"<a href=\"https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-explain-predict\" target=\"_blank\">ML.EXPLAIN_PREDICT</a> has built-in <a href=\"https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-xai-overview\" target=\"_blank\">Explainable AI</a>. This allows you to see the top contributing features to each prediction and interpret how it was computed."
"[ML.EXPLAIN_PREDICT](https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-explain-predict) has built-in [Explainable AI](https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-xai-overview). This allows you to see the top contributing features to each prediction and interpret how it was computed."
]
},
{
@@ -824,7 +787,7 @@
"\n",
"print(sql_explain_predict)\n",
"\n",
"run_bq_query(sql_explain_predict)"
"bq_query(sql_explain_predict)"
]
},
{
@@ -833,7 +796,7 @@
"id": "fa1f96c0f452"
},
"source": [
"Since the `top_feature_attributions` is a nested column, you can unnest the array (<a href=\"https://cloud.google.com/bigquery/docs/reference/standard-sql/arrays\" target=\"_blank\">documentation</a>) into separate rows for each of the features. In other words, since ML.EXPLAIN_PREDICT provides the top 5 most important features, using `UNNEST` results in 5 rows per prediction:"
"Since the `top_feature_attributions` is a nested column, you can unnest the array ([documentation](https://cloud.google.com/bigquery/docs/reference/standard-sql/arrays)) into separate rows for each of the features. In other words, since ML.EXPLAIN_PREDICT provides the top 5 most important features, using `UNNEST` results in 5 rows per prediction:"
]
},
{
@@ -864,7 +827,7 @@
"\n",
"print(sql_explain_predict)\n",
"\n",
"run_bq_query(sql_explain_predict)"
"bq_query(sql_explain_predict)"
]
},
{
@@ -884,7 +847,7 @@
"source": [
"When the model was trained in BigQuery ML, the line `model_registry=\"vertex_ai\"` registered the model to Vertex AI Model Registry automatically upon completion.\n",
"\n",
"You can view the model on the <a href=\"https://console.cloud.google.com/vertex-ai/models\" target=\"_blank\">Vertex AI Model Registry page</a>, or use the code below to check that it was successfully registered:"
"You can view the model on the [Vertex AI Model Registry page](https://console.cloud.google.com/vertex-ai/models), or use the code below to check that it was successfully registered:"
]
},
{
@@ -895,7 +858,12 @@
},
"outputs": [],
"source": [
"model = vertex_ai.Model(model_name=BQML_MODEL_NAME)\n",
"print(f\"BQML_MODEL_NAME = {BQML_MODEL_NAME}\")\n",
"\n",
"models = vertex_ai.Model.list(\n",
" filter=f\"display_name={BQML_MODEL_NAME}\", order_by=\"update_time\"\n",
")\n",
"model = models[0]\n",
"\n",
"print(model.gca_resource)"
]
@@ -915,7 +883,7 @@
"id": "b6120dcc1ff6"
},
"source": [
"While BigQuery ML supports batch prediction with <a href=\"https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-predict\" target=\"_blank\">ML.PREDICT</a> and <a href=\"https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-explain-predict\" target=\"_blank\">ML.EXPLAIN_PREDICT</a>, BigQuery ML is not suitable for real-time predictions where you need low latency predictions with potentially high frequency of requests.\n",
"While BigQuery ML supports batch prediction with [ML.PREDICT](https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-predict) and [ML.EXPLAIN_PREDICT](https://cloud.google.com/bigquery-ml/docs/reference/standard-sql/bigqueryml-syntax-explain-predict), BigQuery ML is not suitable for real-time predictions where you need low latency predictions with potentially high frequency of requests.\n",
"\n",
"In other words, deploying the BigQuery ML model to an endpoint enables you to do online predictions."
]
@@ -938,6 +906,30 @@
"To deploy your model to an endpoint, you will first need to create an endpoint before you deploy the model to it."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "3ce73125dff6"
},
"outputs": [],
"source": [
"def create_endpoint(\n",
" project: str,\n",
" display_name: str,\n",
" location: str,\n",
"):\n",
" endpoint = vertex_ai.Endpoint.create(\n",
" display_name=display_name,\n",
" project=project,\n",
" location=location,\n",
" )\n",
"\n",
" print(endpoint.display_name)\n",
" print(endpoint.resource_name)\n",
" return endpoint"
]
},
{
"cell_type": "code",
"execution_count": null,
@@ -946,16 +938,17 @@
},
"outputs": [],
"source": [
"ENDPOINT_NAME = f\"{BQML_MODEL_NAME}-endpoint\"\n",
"endpoint_name = f\"{BQML_MODEL_NAME}-{TIMESTAMP}\"\n",
"\n",
"endpoint = vertex_ai.Endpoint.create(\n",
" display_name=ENDPOINT_NAME,\n",
" project=PROJECT_ID,\n",
" location=REGION,\n",
"print(\n",
" f\"\"\"\n",
"PROJECT_ID: {PROJECT_ID},\n",
"endpoint_name: {endpoint_name}\n",
"REGION: {REGION}\n",
"\"\"\"\n",
")\n",
"\n",
"print(endpoint.display_name)\n",
"print(endpoint.resource_name)"
"create_endpoint(PROJECT_ID, endpoint_name, REGION)"
]
},
{
@@ -973,7 +966,31 @@
"id": "951ed1693f6b"
},
"source": [
"List the endpoints to make sure it has successfully been created. (You can also view your endpoints on the <a href=\"https://console.cloud.google.com/vertex-ai/endpoints\" target=\"_blank\">Vertex AI Endpoints page</a>)."
"List the endpoints to make sure it has successfully been created. You can also view your endpoints on the [Vertex AI Endpoints page](https://console.cloud.google.com/vertex-ai/endpoints?project=polong-contentdev)."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "0a9bad8d9ad4"
},
"outputs": [],
"source": [
"endpoint = vertex_ai.Endpoint.list(\n",
" # filter=f'display_name={endpoint_name}', # optional: filter by specific endpoint name\n",
" order_by=\"update_time\"\n",
")\n",
"endpoint[-1]"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "2431a4d28d97"
},
"source": [
"Retrieve the endpoint id so you can use it in the next step."
]
},
{
@@ -984,7 +1001,7 @@
},
"outputs": [],
"source": [
"endpoint.list()"
"endpoint[-1].to_dict()"
]
},
{
@@ -1002,19 +1019,74 @@
"id": "6a90be5b77a2"
},
"source": [
"With the new endpoint, you can now deploy your model."
"With the model, you can now deploy it to an endpoint. "
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "c70ecc568ee5"
"id": "af323ea42c5b"
},
"outputs": [],
"source": [
"from typing import Dict, Optional, Sequence, Tuple\n",
"\n",
"\n",
"def deploy_model_with_automatic_resources_sample(\n",
" project,\n",
" location,\n",
" model_name: str,\n",
" endpoint: Optional[vertex_ai.Endpoint] = None,\n",
" deployed_model_display_name: Optional[str] = None,\n",
" traffic_percentage: Optional[int] = 0,\n",
" traffic_split: Optional[Dict[str, int]] = None,\n",
" min_replica_count: int = 1,\n",
" max_replica_count: int = 1,\n",
" metadata: Optional[Sequence[Tuple[str, str]]] = (),\n",
" sync: bool = True,\n",
"):\n",
" \"\"\"\n",
" model_name: A fully-qualified model resource name or model ID.\n",
" Example: \"projects/123/locations/us-central1/models/456\" or\n",
" \"456\" when project and location are initialized or passed.\n",
" \"\"\"\n",
"\n",
" model = vertex_ai.Model(model_name=model_name)\n",
"\n",
" model.deploy(\n",
" endpoint=endpoint,\n",
" deployed_model_display_name=deployed_model_display_name,\n",
" traffic_percentage=traffic_percentage,\n",
" traffic_split=traffic_split,\n",
" min_replica_count=min_replica_count,\n",
" max_replica_count=max_replica_count,\n",
" metadata=metadata,\n",
" sync=sync,\n",
" )\n",
"\n",
" model.wait()\n",
"\n",
" print(model.display_name)\n",
" print(model.resource_name)\n",
" return"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "9e6763369af4"
},
"outputs": [],
"source": [
"# deploying the model to the endpoint may take 10-15 minutes\n",
"model.deploy(endpoint=endpoint)"
"deploy_model_with_automatic_resources_sample(\n",
" project=PROJECT_ID,\n",
" location=REGION,\n",
" model_name=BQML_MODEL_NAME,\n",
" endpoint=endpoint[-1],\n",
")"
]
},
{
@@ -1023,7 +1095,7 @@
"id": "c303d779477b"
},
"source": [
"You can also check on the status of your model by visiting the <a href=\"https://console.cloud.google.com/vertex-ai/endpoints\" target=\"_blank\">Vertex AI Endpoints page</a>."
"You can also check on the status of your model by visiting the [Vertex AI Endpoints page](https://console.cloud.google.com/vertex-ai/endpoints)."
]
},
{
@@ -1096,12 +1168,35 @@
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "b4839f31d2f8"
"id": "2c6093ce9f8a"
},
"outputs": [],
"source": [
"prediction = endpoint.predict(df_sample_requests_list)\n",
"print(prediction)"
"def endpoint_predict_sample(\n",
" project: str, location: str, instances: list, endpoint: str\n",
"):\n",
" endpoint = vertex_ai.Endpoint(endpoint)\n",
"\n",
" prediction = endpoint.predict(instances=instances)\n",
" return prediction"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "0c41fd6eeb6f"
},
"outputs": [],
"source": [
"prediction_response = endpoint_predict_sample(\n",
" project=PROJECT_ID,\n",
" location=REGION,\n",
" instances=df_sample_requests_list,\n",
" endpoint=endpoint[-1].name,\n",
")\n",
"\n",
"prediction_response"
]
},
{
@@ -1121,7 +1216,7 @@
},
"outputs": [],
"source": [
"prediction.predictions"
"prediction_response.predictions"
]
},
{
@@ -1132,8 +1227,8 @@
"source": [
"## Cleaning up\n",
"\n",
"To clean up all Google Cloud resources used in this project, you can <a href=\"https://cloud.google.com/resource-manager/docs/creating-managing-projects#shutting_down_projects\" target=\"_blank\">delete the Google Cloud\n",
"project</a> you used for the tutorial.\n",
"To clean up all Google Cloud resources used in this project, you can [delete the Google Cloud\n",
"project](https://cloud.google.com/resource-manager/docs/creating-managing-projects#shutting_down_projects) you used for the tutorial.\n",
"\n",
"Otherwise, you can delete the individual resources you created in this tutorial:"
]
@@ -1146,12 +1241,18 @@
},
"outputs": [],
"source": [
"# Undeploy model from endpoint and delete endpoint\n",
"endpoint.undeploy_all()\n",
"endpoint.delete()\n",
"# MODEL_ID = model.name\n",
"\n",
"# Delete BigQuery dataset, including the BigQuery ML model\n",
"! bq rm -r -f $PROJECT_ID:$BQ_DATASET_NAME"
"ENDPOINT_ID = int(endpoint[-1].name)\n",
"\n",
"# Undeploy model from endpoint\n",
"endpoint[-1].undeploy_all()\n",
"\n",
"# Delete endpoint resource\n",
"! gcloud ai endpoints delete $ENDPOINT_ID --quiet --region $REGION\n",
"\n",
"# Delete BigQuery ML model\n",
"! bq rm -f --model $PROJECT_ID\\:$BQ_DATASET_NAME\\.$BQML_MODEL_NAME"
]
}
],
-3
View File
@@ -1,3 +0,0 @@
# README
These are notebooks [Cohere](https://cohere.ai/) built in collaboration with Google. They demonstrate how to use Cohere's modeling API along with Vertex AI.
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+1 -1
View File
@@ -14,5 +14,5 @@ The purpose of this set of notebooks and markdown files is to demonstrate Google
4. [Evaluation](stage4)
5. [Deployment](stage5)
6. [Serving](stage6)
7. Monitoring(stage7)
7. Monitoring
8. Continuous Training
-43
View File
@@ -1,43 +0,0 @@
## Before you begin
### Set up your Google Cloud project
**The following steps are required, regardless of your notebook environment.**
1. [Select or create a Google Cloud project](https://console.cloud.google.com/cloud-resource-manager). When you first create an account, you get a $300 free credit towards your compute/storage costs.
1. [Make sure that billing is enabled for your project](https://cloud.google.com/billing/docs/how-to/modify-project).
1. [Enable the Vertex AI, BigQuery, Compute Engine and Cloud Storage APIs](https://console.cloud.google.com/flows/enableapi?apiid=aiplatform.googleapis.com,bigquery,compute_component,storage_component).
1. If you are running this notebook locally, you need to install the [Cloud SDK](https://cloud.google.com/sdk).
1. Enter your project ID in the cell below. Then run the cell to make sure the
Cloud SDK uses the right project for all the commands in this notebook.
**Note**: Jupyter runs lines prefixed with `!` as shell commands, and it interpolates Python variables prefixed with `$` into these commands.
### Set up your local development environment
**If you are using Colab or Vertex AI Workbench Notebooks**, your environment already meets all the requirements to run this notebook. You can skip this step.
**Otherwise**, make sure your environment meets this notebook's requirements. You need the following:
- The Cloud Storage SDK
- Python 3
- virtualenv
- Jupyter notebook running in a virtual environment with Python 3
The Cloud Storage guide to [Setting up a Python development environment](https://cloud.google.com/python/setup) and the [Jupyter installation guide](https://jupyter.org/install) provide detailed instructions for meeting these requirements. The following steps provide a condensed set of instructions:
1. [Install and initialize the SDK](https://cloud.google.com/sdk/docs/).
2. [Install Python 3](https://cloud.google.com/python/setup#installing_python).
3. [Install virtualenv](https://cloud.google.com/python/setup#installing_and_using_virtualenv) and create a virtual environment that uses Python 3. Activate the virtual environment.
4. To install Jupyter, run `pip3 install jupyter` on the command-line in a terminal shell.
5. To launch Jupyter, run `jupyter notebook` on the command-line in a terminal shell.
6. Open this notebook in the Jupyter Notebook Dashboard.
-112
View File
@@ -1,112 +0,0 @@
import os
import sys
import argparse
import subprocess
import random
import string
parser = argparse.ArgumentParser()
parser.add_argument('--bucket', dest='bucket_required', action='store_true',
default=False, help='Bucket required')
parser.add_argument('--email', dest='email_required', action='store_true',
default=False, help='Email required')
parser.add_argument('--sa', dest='sa_required', action='store_true',
default=False, help='Service account required')
parser.add_argument('--packages', dest='extra_packages',
default='', type=str, help='additional required packages')
args = parser.parse_args()
extra_pkgs = args.extra_packages
# Installation
# The Vertex AI Workbench Notebook product has specific requirements
IS_WORKBENCH_NOTEBOOK = os.getenv("DL_ANACONDA_HOME")
IS_USER_MANAGED_WORKBENCH_NOTEBOOK = os.path.exists(
"/opt/deeplearning/metadata/env_version"
)
IS_COLAB = "google.colab" in sys.modules
# Vertex AI Notebook requires dependencies to be installed with '--user'
USER_FLAG = ""
if IS_WORKBENCH_NOTEBOOK:
USER_FLAG = "--user"
# not used
'''
print("Installing packages")
os.system(f"pip3 install --upgrade --quiet {USER_FLAG} google-cloud-aiplatform {args.extra_packages}")
print("Done installation")
'''
# Authenticate
if IS_COLAB:
from google.colab import auth as google_auth
google_auth.authenticate_user()
# project ID
if IS_WORKBENCH_NOTEBOOK:
shell_output = subprocess.check_output("gcloud config list --format 'value(core.project)' 2>/dev/null", shell=True)
PROJECT_ID = shell_output[0:-1].decode('utf-8')
print("PROJECT ID: ", PROJECT_ID)
else:
PROJECT_ID = input("Enter PROJECT_ID: ")
os.system(f"gcloud config set project {PROJECT_ID}")
# email
if args.email_required:
shell_output = subprocess.check_output("gcloud config list --format 'value(core.account)' 2>/dev/null", shell=True)
EMAIL_ADDR = shell_output[0:-1].decode('utf-8')
if EMAIL_ADDR == '':
EMAIL_ADDR = input("Enter Email Address: ")
print("EMAIL_ADDR: ", EMAIL_ADDR)
# region
shell_output = subprocess.check_output("gcloud config list --format 'value(ai.region)'", shell=True)
REGION = shell_output[0:-1].decode('utf-8')
if REGION == '':
REGION = input("Enter REGION: ")
print("REGION: ", REGION)
# multi-region
MULTI_REGION = REGION.split('-')[0]
# UUID
# Generate a uuid of a specifed length(default=8)
def generate_uuid(length: int = 8) -> str:
return "".join(random.choices(string.ascii_lowercase + string.digits, k=length))
UUID = generate_uuid()
print("UUID", UUID)
# Bucket
if args.bucket_required:
BUCKET_NAME = PROJECT_ID + "aip-" + UUID
BUCKET_URI = f"gs://{BUCKET_NAME}"
os.system(f"gsutil mb -l {REGION} {BUCKET_URI}")
print("BUCKET_URI", BUCKET_URI)
# Project Number
if args.sa_required:
if IS_WORKBENCH_NOTEBOOK:
shell_output = subprocess.check_output("gcloud auth list 2>/dev/null", shell=True)
SERVICE_ACCOUNT = shell_output[:-1].decode('utf-8').split('\n')[2].strip()
PROJECT_NUMBER = SERVICE_ACCOUNT.split('-')[0]
else:
shell_output = subprocess.check_output(f"gcloud projects describe {PROJECT_ID}", shell=True)
try:
PROJECT_NUMBER = shell_output[:-1].decode('utf-8').split('\n')[7].split(':')[-1].strip().replace("'", "")
SERVICE_ACCOUNT = f"{PROJECT_NUMBER}-compute@developer.gserviceaccount.com"
except:
PROJECT_NUMBER = input("Enter project number: ")
SERVICE_ACCOUNT = f"{PROJECT_NUMBER}-compute@developer.gserviceaccount.com"
print("SERVICE_ACCOUNT", SERVICE_ACCOUNT)
print("PROJECT_NUMBER", PROJECT_NUMBER)
+27 -50
View File
@@ -28,38 +28,16 @@ The first stage in MLOps is the collection and preparation for the purpose of de
### Get Started
[Get started with Dataflow](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_dataflow.ipynb)
[Get started with Vertex AI datasets](get_started_vertex_datasets.ipynb)
```
Learn how to use `Dataflow` for training with `Vertex AI`.
The steps performed include:
- Offline preprocessing of data:
- Serially - w/o dataflow
- Parallel - with dataflow
- Upstream preprocessing of data:
- tabular data
- image data
```
[Get started with Vertex AI datasets](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_vertex_datasets.ipynb)
```
Learn how to use `Vertex AI Dataset` for training with `Vertex AI`.
The steps performed include:
- Create a Vertex AI `Dataset` resource for:
- image data
- text data
- video data
- tabular data
- forecasting data
- Search `Dataset` resources using a filter.
- Read a sample of a `BigQuery` dataset into a dataframe.
- Generate statistics and data schema using TensorFlow Data Validation from the samples in the dataframe.
@@ -68,14 +46,32 @@ The steps performed include:
- Export a dataset and convert to TFRecords.
```
[Get started with BigQuery datasets](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_bq_datasets.ipynb)
[Get started with Dataflow](get_started_dataflow.ipynb)
```
Learn how to use `BigQuery` as a dataset for training with `Vertex AI`.
The steps performed include:
- Offline preprocessing of data:
- Serially - w/o dataflow
- Parallel - with dataflow
- Upstream preprocessing of data:
- tabular data
- image data
```
[Create an unlabelled Vertex AI AutoML text entity extraction dataset from pdfs using Vision API](get_started_with_visionapi_and_vertex_datasets.ipynb)
```
The steps performed include:
1. Using `Vision API` to perform Optical Character Recognition (OCR) to extract text from PDF files.
2. Processing the results and saving them to text files.
3. Generating a `Vertex AI Dataset` import file.
4. Creating a new unlabelled text entity extraction `Vertex AI Dataset` resource in `Vertex AI`.
```
[Get started with BigQuery datasets](get_started_bq_datasets.ipynb)
```
The steps performed include:
- Create a Vertex AI `Dataset` resource from `BigQuery` table -- compatible for `AutoML` training.
- Extract a copy of the dataset from `BigQuery` to a CSV file in Cloud Storage -- compatible for `AutoML` or custom training.
- Select rows from a `BigQuery` dataset into a `pandas` dataframe -- compatible for custom training.
@@ -85,44 +81,25 @@ The steps performed include:
- Extract data from `BigQuery` table into a `DMatrix` -- compatible for custom training `XGBoost` models.
```
[Get started with Vertex AI Data Labeling](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_with_data_labeling.ipynb)
[Get started with Vertex AI data labeling](get_started_with_data_labeling.ipynb)
```
Learn how to use the `Vertex AI Data Labeling` service/
The steps performed include:
- Create a Specialist Pool for data labelers.
- Create a data labeling job.
- Submit the data labeling job.
- List data labeling jobs.
- Cancel a data labeling job.
```
[Create an unlabelled Vertex AI AutoML text entity extraction dataset from PDFs using Vision API](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_with_visionapi_and_vertex_datasets.ipynb)
```
Learn to use `Vision API` to extract text from PDF files stored on a Cloud Storage bucket.
The steps performed include:
1. Using `Vision API` to perform Optical Character Recognition (OCR) to extract text from PDF files.
2. Processing the results and saving them to text files.
3. Generating a `Vertex AI Dataset` import file.
4. Cr
### E2E Stage Example
[Data management](https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/mlops_data_management.ipynb)
[Stage 1: Data Management](mlops_data_management.ipynb)
```
In this tutorial, you create a MLOps stage 1: data management process.
The steps performed include:
- Explore and visualize the data.
- Create a Vertex AI `Dataset` resource from `BigQuery` table -- for AutoML training.
- Extract a copy of the dataset to a CSV file in Cloud Storage.
@@ -131,4 +108,4 @@ The steps performed include:
- Generate statistics and data schema using TensorFlow Data Validation from the samples in the dataframe.
- Generate a TFRecord feature specification using TensorFlow Data Validation from the data schema.
- Preprocess a portion of the BigQuery data using `Dataflow` -- for custom training.
```
```
@@ -120,7 +120,7 @@
" - XGBoost model training:\n",
" - Use BigQuery ML built-in XGBoost training.\n",
" - Alternatively, create a DMatrix generator from CSV files extracted from BigQuery table.\n",
" - PyTorch model training:\n",
" - Pytorch model training:\n",
" - Extract the BigQuery to a pandas dataframe.\n",
" - Preprocess the data in the dataframe.\n",
" - Create a DataLoader generator from the pandas dataframe.\n",
@@ -191,8 +191,13 @@
"if IS_WORKBENCH_NOTEBOOK:\n",
" USER_FLAG = \"--user\"\n",
"\n",
"extra_pkgs = \"tensorflow tensorflow-io==0.18 pyarrow xgboost google-cloud-bigquery\"\n",
"! pip3 install --upgrade --quiet {USER_FLAG} google-cloud-aiplatform $extra_pkgs"
"# Install the packages\n",
"! pip3 install --upgrade pyarrow $USER_FLAG -q\n",
"! pip3 install --upgrade google-cloud-bigquery $USER_FLAG -q\n",
"! pip3 install --upgrade google-cloud-aiplatform $USER_FLAG -q\n",
"! pip3 install -U xgboost $USER_FLAG -q\n",
"! pip3 install -U tensorflow $USER_FLAG -q\n",
"! pip3 install -U tensorflow-io==0.18 $USER_FLAG -q"
]
},
{
@@ -214,9 +219,9 @@
},
"outputs": [],
"source": [
"import sys\n",
"import os\n",
"\n",
"if \"google.colab\" in sys.modules:\n",
"if not os.getenv(\"IS_TESTING\"):\n",
" # Automatically restart kernel after installs\n",
" import IPython\n",
"\n",
@@ -227,42 +232,274 @@
{
"cell_type": "markdown",
"metadata": {
"id": "fc8fb52b5cca"
"id": "84cd83853240"
},
"source": [
"### Common setup\n",
"## Before you begin\n",
"\n",
"Now, execute the common setup for the notebook tutorials."
"### Set up your Google Cloud project\n",
"\n",
"**The following steps are required, regardless of your notebook environment.**\n",
"\n",
"1. [Select or create a Google Cloud project](https://console.cloud.google.com/cloud-resource-manager). When you first create an account, you get a $300 free credit towards your compute/storage costs.\n",
"\n",
"1. [Make sure that billing is enabled for your project](https://cloud.google.com/billing/docs/how-to/modify-project).\n",
"\n",
"1. [Enable the Vertex AI, BigQuery, Compute Engine and Cloud Storage APIs](https://console.cloud.google.com/flows/enableapi?apiid=aiplatform.googleapis.com,bigquery,compute_component,storage_component).\n",
"\n",
"1. If you are running this notebook locally, you need to install the [Cloud SDK](https://cloud.google.com/sdk).\n",
"\n",
"1. Enter your project ID in the cell below. Then run the cell to make sure the\n",
"Cloud SDK uses the right project for all the commands in this notebook.\n",
"\n",
"**Note**: Jupyter runs lines prefixed with `!` as shell commands, and it interpolates Python variables prefixed with `$` into these commands."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "project_id"
},
"source": [
"#### Set your project ID\n",
"\n",
"**If you don't know your project ID**, you may be able to get your project ID using `gcloud`."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "001a0fcd5d78"
"id": "set_project_id"
},
"outputs": [],
"source": [
"# Common code setup for notebook tutorials\n",
"\n",
"! wget https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/notebooks/community/ml_ops/setup.py -O setup.py\n",
"\n",
"%run setup.py --bucket"
"PROJECT_ID = \"[your-project-id]\" # @param {type:\"string\"}"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "d809f07a8935"
"id": "autoset_project_id"
},
"outputs": [],
"source": [
"# Other Common setup instructions for notebook tutorials\n",
"if PROJECT_ID == \"\" or PROJECT_ID is None or PROJECT_ID == \"[your-project-id]\":\n",
" # Get your GCP project id from gcloud\n",
" shell_output = ! gcloud config list --format 'value(core.project)' 2>/dev/null\n",
" PROJECT_ID = shell_output[0]\n",
" print(\"Project ID:\", PROJECT_ID)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "set_gcloud_project_id"
},
"outputs": [],
"source": [
"! gcloud config set project $PROJECT_ID"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "region"
},
"source": [
"#### Region\n",
"\n",
"! wget https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/notebooks/community/ml_ops/setup.md -O setup.md\n",
"You can also change the `REGION` variable, which is used for operations\n",
"throughout the rest of this notebook. Below are regions supported for Vertex AI. We recommend that you choose the region closest to you.\n",
"\n",
"%load setup.md"
"- Americas: `us-central1`\n",
"- Europe: `europe-west4`\n",
"- Asia Pacific: `asia-east1`\n",
"\n",
"You may not use a multi-regional bucket for training with Vertex AI. Not all regions provide support for all Vertex AI services.\n",
"\n",
"Learn more about [Vertex AI regions](https://cloud.google.com/vertex-ai/docs/general/locations)."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "region"
},
"outputs": [],
"source": [
"REGION = \"[your-region]\" # @param {type: \"string\"}\n",
"\n",
"if REGION == \"[your-region]\":\n",
" REGION = \"us-central1\""
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "timestamp"
},
"source": [
"#### Timestamp\n",
"\n",
"If you are in a live tutorial session, you might be using a shared test account or project. To avoid name collisions between users on resources created, you create a timestamp for each instance session, and append the timestamp onto the name of resources you create in this tutorial."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "timestamp"
},
"outputs": [],
"source": [
"from datetime import datetime\n",
"\n",
"TIMESTAMP = datetime.now().strftime(\"%Y%m%d%H%M%S\")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "77c385f0db59"
},
"source": [
"### Authenticate your Google Cloud account\n",
"\n",
"**If you are using Vertex AI Workbench Notebooks**, your environment is already authenticated. Skip this step.\n",
"\n",
"**If you are using Colab**, run the cell below and follow the instructions when prompted to authenticate your account via oAuth.\n",
"\n",
"**Otherwise**, follow these steps:\n",
"\n",
"In the Cloud Console, go to the [Create service account key](https://console.cloud.google.com/apis/credentials/serviceaccountkey) page.\n",
"\n",
"1. **Click Create service account**.\n",
"\n",
"2. In the **Service account name** field, enter a name, and click **Create**.\n",
"\n",
"3. In the **Grant this service account access to project** section, click the Role drop-down list. Type \"Vertex AI\" into the filter box, and select **Vertex AI Administrator**. Type \"Storage Object Admin\" into the filter box, and select **Storage Object Admin**.\n",
"\n",
"4. Click Create. A JSON file that contains your key downloads to your local environment.\n",
"\n",
"5. Enter the path to your service account key as the GOOGLE_APPLICATION_CREDENTIALS variable in the cell below and run the cell."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "535223fa4b84"
},
"outputs": [],
"source": [
"# If you are running this notebook in Colab, run this cell and follow the\n",
"# instructions to authenticate your GCP account. This provides access to your\n",
"# Cloud Storage bucket and lets you submit training jobs and prediction\n",
"# requests.\n",
"\n",
"import os\n",
"import sys\n",
"\n",
"# If on Vertex AI Workbench, then don't execute this code\n",
"IS_COLAB = False\n",
"if not os.path.exists(\"/opt/deeplearning/metadata/env_version\") and not os.getenv(\n",
" \"DL_ANACONDA_HOME\"\n",
"):\n",
" if \"google.colab\" in sys.modules:\n",
" IS_COLAB = True\n",
" from google.colab import auth as google_auth\n",
"\n",
" google_auth.authenticate_user()\n",
"\n",
" # If you are running this notebook locally, replace the string below with the\n",
" # path to your service account key and run this cell to authenticate your GCP\n",
" # account.\n",
" elif not os.getenv(\"IS_TESTING\"):\n",
" %env GOOGLE_APPLICATION_CREDENTIALS ''"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "bucket:custom"
},
"source": [
"### Create a Cloud Storage bucket\n",
"\n",
"**The following steps are required, regardless of your notebook environment.**\n",
"\n",
"When you create a dataset resource using the Vertex SDK, you can provide a Cloud Storage bucket that contains the data. Vertex AI creates the dataset resource from the data. In this tutorial, Vertex AI also creates a dataset resource from your data in the Cloud Storage bucket.\n",
"\n",
"Set the name of your Cloud Storage bucket below. Bucket names must be globally unique across all Google Cloud projects, including those outside of your organization."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "bucket"
},
"outputs": [],
"source": [
"BUCKET_NAME = \"[your-bucket-name]\" # @param {type:\"string\"}\n",
"BUCKET_URI = f\"gs://{BUCKET_NAME}\""
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "autoset_bucket"
},
"outputs": [],
"source": [
"if BUCKET_URI == \"\" or BUCKET_URI is None or BUCKET_URI == \"gs://[your-bucket-name]\":\n",
" BUCKET_NAME = PROJECT_ID + \"aip-\" + TIMESTAMP\n",
" BUCKET_URI = \"gs://\" + BUCKET_NAME"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "create_bucket"
},
"source": [
"**Only if your bucket doesn't already exist**: Run the following cell to create your Cloud Storage bucket."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "create_bucket"
},
"outputs": [],
"source": [
"! gsutil mb -l $REGION $BUCKET_URI"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "validate_bucket"
},
"source": [
"Finally, validate access to your Cloud Storage bucket by examining its contents:"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "validate_bucket"
},
"outputs": [],
"source": [
"! gsutil ls -al $BUCKET_URI"
]
},
{
@@ -383,7 +620,7 @@
"outputs": [],
"source": [
"dataset = aiplatform.TabularDataset.create(\n",
" display_name=\"NOAA historical weather data\" + \"_\" + UUID,\n",
" display_name=\"NOAA historical weather data\" + \"_\" + TIMESTAMP,\n",
" bq_source=[IMPORT_FILE],\n",
" labels={\"user_metadata\": BUCKET_URI[5:]},\n",
")\n",
@@ -458,7 +695,7 @@
"gcs_source = IMPORT_FILES\n",
"\n",
"dataset = aiplatform.TabularDataset.create(\n",
" display_name=\"NOAA historical weather data\" + \"_\" + UUID,\n",
" display_name=\"NOAA historical weather data\" + \"_\" + TIMESTAMP,\n",
" gcs_source=gcs_source,\n",
" labels={\"user_metadata\": BUCKET_URI[5:]},\n",
")\n",
@@ -500,10 +737,10 @@
" or BQ_MY_DATASET is None\n",
" or BQ_MY_DATASET == \"[your-dataset-name]\"\n",
"):\n",
" BQ_MY_DATASET = \"mlops_dataset_\" + UUID\n",
" BQ_MY_DATASET = \"mlops_dataset_\" + TIMESTAMP\n",
"\n",
"if BQ_MY_TABLE == \"\" or BQ_MY_TABLE is None or BQ_MY_TABLE == \"[your-view-name]\":\n",
" BQ_MY_TABLE = \"mlops_view_\" + UUID"
" BQ_MY_TABLE = \"mlops_view_\" + TIMESTAMP"
]
},
{
@@ -44,7 +44,7 @@
" </a>\n",
" </td>\n",
" <td>\n",
" <a href=\"https://console.cloud.google.com/vertex-ai/workbench/deploy-notebook?download_url=https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/notebooks/community/ml_ops/stage1/get_started_dataflow.ipynb\">\n",
" <a href=\"https://console.cloud.google.com/vertex-ai/workbench/deploy-notebook?download_url=https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_dataflow.ipynb\">\n",
" <img src=\"https://lh3.googleusercontent.com/UiNooY4LUgW_oTvpsNhPpQzsstV5W8F7rYgxgGBD85cWJoLmrOzhVs_ksK_vgx40SHs7jCqkTkCk=e14-rj-sc0xffffff-h130-w32\" alt=\"Vertex AI logo\">\n",
" Open in Vertex AI Workbench\n",
" </a>\n",
@@ -186,9 +186,13 @@
"if IS_WORKBENCH_NOTEBOOK:\n",
" USER_FLAG = \"--user\"\n",
"\n",
"extra_pkgs = \"tensorflow==2.5 tensorflow-data-validation==1.2 tensorflow-transform==1.2 \\\n",
" tensorflow-io==0.18 pyarrow pandas apache-beam[gcp] google-cloud-bigquery\"\n",
"! pip3 install --upgrade --quiet {USER_FLAG} google-cloud-aiplatform $extra_pkgs"
"! pip3 install -U tensorflow==2.5 $USER_FLAG -q\n",
"! pip3 install -U tensorflow-data-validation==1.2 $USER_FLAG -q\n",
"! pip3 install -U tensorflow-transform==1.2 $USER_FLAG -q\n",
"! pip3 install -U tensorflow-io==0.18 $USER_FLAG -q\n",
"! pip3 install --upgrade google-cloud-aiplatform $USER_FLAG -q\n",
"! pip3 install --upgrade google-cloud-bigquery $USER_FLAG -q\n",
"! pip3 install --upgrade apache-beam[gcp] $USER_FLAG -q"
]
},
{
@@ -210,9 +214,9 @@
},
"outputs": [],
"source": [
"import sys\n",
"import os\n",
"\n",
"if \"google.colab\" in sys.modules:\n",
"if not os.getenv(\"IS_TESTING\"):\n",
" # Automatically restart kernel after installs\n",
" import IPython\n",
"\n",
@@ -223,42 +227,279 @@
{
"cell_type": "markdown",
"metadata": {
"id": "fc8fb52b5cca"
"id": "84cd83853240"
},
"source": [
"### Common setup\n",
"## Before you begin\n",
"\n",
"Now, execute the common setup for the notebook tutorials."
"### Set up your Google Cloud project\n",
"\n",
"**The following steps are required, regardless of your notebook environment.**\n",
"\n",
"1. [Select or create a Google Cloud project](https://console.cloud.google.com/cloud-resource-manager). When you first create an account, you get a $300 free credit towards your compute/storage costs.\n",
"\n",
"1. [Make sure that billing is enabled for your project](https://cloud.google.com/billing/docs/how-to/modify-project).\n",
"\n",
"1. [Enable the Vertex AI, BigQuery, Compute Engine and Cloud Storage APIs](https://console.cloud.google.com/flows/enableapi?apiid=aiplatform.googleapis.com,bigquery,compute_component,storage_component).\n",
"\n",
"1. If you are running this notebook locally, you need to install the [Cloud SDK](https://cloud.google.com/sdk).\n",
"\n",
"1. Enter your project ID in the cell below. Then run the cell to make sure the\n",
"Cloud SDK uses the right project for all the commands in this notebook.\n",
"\n",
"**Note**: Jupyter runs lines prefixed with `!` as shell commands, and it interpolates Python variables prefixed with `$` into these commands."
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "project_id"
},
"source": [
"#### Set your project ID\n",
"\n",
"**If you don't know your project ID**, you may be able to get your project ID using `gcloud`."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "001a0fcd5d78"
"id": "set_project_id"
},
"outputs": [],
"source": [
"# Common code setup for notebook tutorials\n",
"\n",
"! wget https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/notebooks/community/ml_ops/setup.py -O setup.py\n",
"\n",
"%run setup.py --bucket"
"PROJECT_ID = \"[your-project-id]\" # @param {type:\"string\"}"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "d809f07a8935"
"id": "autoset_project_id"
},
"outputs": [],
"source": [
"# Other Common setup instructions for notebook tutorials\n",
"if PROJECT_ID == \"\" or PROJECT_ID is None or PROJECT_ID == \"[your-project-id]\":\n",
" # Get your GCP project id from gcloud\n",
" shell_output = ! gcloud config list --format 'value(core.project)' 2>/dev/null\n",
" PROJECT_ID = shell_output[0]\n",
" print(\"Project ID:\", PROJECT_ID)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "set_gcloud_project_id"
},
"outputs": [],
"source": [
"! gcloud config set project $PROJECT_ID"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "region"
},
"source": [
"#### Region\n",
"\n",
"! wget https://raw.githubusercontent.com/GoogleCloudPlatform/vertex-ai-samples/main/notebooks/community/ml_ops/setup.md -O setup.md\n",
"You can also change the `REGION` variable, which is used for operations\n",
"throughout the rest of this notebook. Below are regions supported for Vertex AI. We recommend that you choose the region closest to you.\n",
"\n",
"%load setup.md "
"- Americas: `us-central1`\n",
"- Europe: `europe-west4`\n",
"- Asia Pacific: `asia-east1`\n",
"\n",
"You may not use a multi-regional bucket for training with Vertex AI. Not all regions provide support for all Vertex AI services.\n",
"\n",
"Learn more about [Vertex AI regions](https://cloud.google.com/vertex-ai/docs/general/locations)."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "region"
},
"outputs": [],
"source": [
"REGION = \"[your-region]\" # @param {type: \"string\"}\n",
"\n",
"if REGION == \"[your-region]\":\n",
" REGION = \"us-central1\""
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "timestamp"
},
"source": [
"#### Timestamp\n",
"\n",
"If you are in a live tutorial session, you might be using a shared test account or project. To avoid name collisions between users on resources created, you create a timestamp for each instance session, and append the timestamp onto the name of resources you create in this tutorial."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "timestamp"
},
"outputs": [],
"source": [
"from datetime import datetime\n",
"\n",
"TIMESTAMP = datetime.now().strftime(\"%Y%m%d%H%M%S\")"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "77c385f0db59"
},
"source": [
"### Authenticate your Google Cloud account\n",
"\n",
"**If you are using Vertex AI Workbench Notebooks**, your environment is already authenticated. Skip this step.\n",
"\n",
"**If you are using Colab**, run the cell below and follow the instructions when prompted to authenticate your account via oAuth.\n",
"\n",
"**Otherwise**, follow these steps:\n",
"\n",
"In the Cloud Console, go to the [Create service account key](https://console.cloud.google.com/apis/credentials/serviceaccountkey) page.\n",
"\n",
"1. **Click Create service account**.\n",
"\n",
"2. In the **Service account name** field, enter a name, and click **Create**.\n",
"\n",
"3. In the **Grant this service account access to project** section, click the Role drop-down list. Type \"Vertex AI\" into the filter box, and select **Vertex AI Administrator**. Type \"Storage Object Admin\" into the filter box, and select **Storage Object Admin**.\n",
"\n",
"4. Click Create. A JSON file that contains your key downloads to your local environment.\n",
"\n",
"5. Enter the path to your service account key as the GOOGLE_APPLICATION_CREDENTIALS variable in the cell below and run the cell."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "535223fa4b84"
},
"outputs": [],
"source": [
"# If you are running this notebook in Colab, run this cell and follow the\n",
"# instructions to authenticate your GCP account. This provides access to your\n",
"# Cloud Storage bucket and lets you submit training jobs and prediction\n",
"# requests.\n",
"\n",
"import os\n",
"import sys\n",
"\n",
"# If on Vertex AI Workbench, then don't execute this code\n",
"IS_COLAB = False\n",
"if not os.path.exists(\"/opt/deeplearning/metadata/env_version\") and not os.getenv(\n",
" \"DL_ANACONDA_HOME\"\n",
"):\n",
" if \"google.colab\" in sys.modules:\n",
" IS_COLAB = True\n",
" from google.colab import auth as google_auth\n",
"\n",
" google_auth.authenticate_user()\n",
"\n",
" # If you are running this notebook locally, replace the string below with the\n",
" # path to your service account key and run this cell to authenticate your GCP\n",
" # account.\n",
" elif not os.getenv(\"IS_TESTING\"):\n",
" %env GOOGLE_APPLICATION_CREDENTIALS ''"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "bucket:custom"
},
"source": [
"### Create a Cloud Storage bucket\n",
"\n",
"**The following steps are required, regardless of your notebook environment.**\n",
"\n",
"When you submit a custom training job using the Vertex SDK, you upload a Python package\n",
"containing your training code to a Cloud Storage bucket. Vertex AI runs\n",
"the code from this package. In this tutorial, Vertex AI also saves the\n",
"trained model that results from your job in the same bucket. You can then\n",
"create an `Endpoint` resource based on this output in order to serve\n",
"online predictions.\n",
"\n",
"Set the name of your Cloud Storage bucket below. Bucket names must be globally unique across all Google Cloud projects, including those outside of your organization."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "bucket"
},
"outputs": [],
"source": [
"BUCKET_NAME = \"[your-bucket-name]\" # @param {type:\"string\"}\n",
"BUCKET_URI = f\"gs://{BUCKET_NAME}\""
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "autoset_bucket"
},
"outputs": [],
"source": [
"if BUCKET_NAME == \"\" or BUCKET_NAME is None or BUCKET_NAME == \"[your-bucket-name]\":\n",
" BUCKET_NAME = PROJECT_ID + \"aip-\" + TIMESTAMP\n",
" BUCKET_URI = \"gs://\" + BUCKET_NAME"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "create_bucket"
},
"source": [
"**Only if your bucket doesn't already exist**: Run the following cell to create your Cloud Storage bucket."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "create_bucket"
},
"outputs": [],
"source": [
"! gsutil mb -l $REGION $BUCKET_URI"
]
},
{
"cell_type": "markdown",
"metadata": {
"id": "validate_bucket"
},
"source": [
"Finally, validate access to your Cloud Storage bucket by examining its contents:"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"id": "validate_bucket"
},
"outputs": [],
"source": [
"! gsutil ls -al $BUCKET_URI"
]
},
{
@@ -1078,7 +1319,7 @@
},
"outputs": [],
"source": [
"delete_storage = False\n",
"delete_storage = True\n",
"\n",
"if delete_storage or os.getenv(\"IS_TESTING\"):\n",
" if \"BUCKET_URI\" in globals():\n",
@@ -33,12 +33,12 @@
"\n",
"<table align=\"left\">\n",
" <td>\n",
" <a href=\"https://colab.research.google.com/github/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_vertex_datasets.ipynb\">\n",
" <a href=\"https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_vertex_datasets.ipynb\">\n",
" <img src=\"https://cloud.google.com/ml-engine/images/colab-logo-32px.png\" alt=\"Colab logo\"> Run in Colab\n",
" </a>\n",
" </td>\n",
" <td>\n",
" <a href=\"https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_vertex_datasets.ipynb\">\n",
" <a href=\"https://console.cloud.google.com/ai/platform/notebooks/deploy-notebook?download_url=https://github.com/GoogleCloudPlatform/vertex-ai-samples/blob/main/notebooks/community/ml_ops/stage1/get_started_vertex_datasets.ipynb\">\n",
"<img src=\"https://cloud.google.com/ml-engine/images/github-logo-32px.png\" alt=\"GitHub logo\">\n",
" View on GitHub\n",
" </a>\n",

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