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Commits
| Author | SHA1 | Date | |
|---|---|---|---|
|
|
d11688df92 |
@@ -123,39 +123,6 @@
|
||||
"to generate a cost estimate based on your projected usage."
|
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]
|
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},
|
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{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {
|
||||
"id": "setup_local"
|
||||
},
|
||||
"source": [
|
||||
"### Set up your local development environment\n",
|
||||
"\n",
|
||||
"If you are using Colab or Google Cloud Notebooks, your environment already meets all the requirements to run this notebook. You can skip this step.\n",
|
||||
"\n",
|
||||
"Otherwise, make sure your environment meets this notebook's requirements. You need the following:\n",
|
||||
"\n",
|
||||
"- The Cloud Storage SDK\n",
|
||||
"- Git\n",
|
||||
"- Python 3\n",
|
||||
"- virtualenv\n",
|
||||
"- Jupyter notebook running in a virtual environment with Python 3\n",
|
||||
"\n",
|
||||
"The Cloud Storage guide to [Setting up a Python development environment](https://cloud.google.com/python/setup) and the [Jupyter installation guide](https://jupyter.org/install) provide detailed instructions for meeting these requirements. The following steps provide a condensed set of instructions:\n",
|
||||
"\n",
|
||||
"1. [Install and initialize the SDK](https://cloud.google.com/sdk/docs/).\n",
|
||||
"\n",
|
||||
"2. [Install Python 3](https://cloud.google.com/python/setup#installing_python).\n",
|
||||
"\n",
|
||||
"3. [Install virtualenv](https://cloud.google.com/python/setup#installing_and_using_virtualenv) and create a virtual environment that uses Python 3. Activate the virtual environment.\n",
|
||||
"\n",
|
||||
"4. To install Jupyter, run `pip3 install jupyter` on the command-line in a terminal shell.\n",
|
||||
"\n",
|
||||
"5. To launch Jupyter, run `jupyter notebook` on the command-line in a terminal shell.\n",
|
||||
"\n",
|
||||
"6. Open this notebook in the Jupyter Notebook Dashboard.\n"
|
||||
]
|
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},
|
||||
{
|
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"cell_type": "markdown",
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"metadata": {
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@@ -164,7 +131,7 @@
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"source": [
|
||||
"## Installation\n",
|
||||
"\n",
|
||||
"Install the latest version of Vertex SDK for Python."
|
||||
"Install the latest version of Vertex AI SDK for Python."
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -177,33 +144,8 @@
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||||
"source": [
|
||||
"import os\n",
|
||||
"\n",
|
||||
"# Google Cloud Notebook\n",
|
||||
"if os.path.exists(\"/opt/deeplearning/metadata/env_version\"):\n",
|
||||
" USER_FLAG = \"--user\"\n",
|
||||
"else:\n",
|
||||
" USER_FLAG = \"\"\n",
|
||||
"\n",
|
||||
"! pip3 install --upgrade google-cloud-aiplatform $USER_FLAG"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {
|
||||
"id": "install_storage"
|
||||
},
|
||||
"source": [
|
||||
"Install the latest GA version of *google-cloud-storage* library as well."
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"metadata": {
|
||||
"id": "install_storage"
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"! pip3 install -U google-cloud-storage $USER_FLAG"
|
||||
"! pip3 install --upgrade --quiet google-cloud-aiplatform \\\n",
|
||||
" google-cloud-storage"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -212,57 +154,38 @@
|
||||
"id": "restart"
|
||||
},
|
||||
"source": [
|
||||
"### Restart the kernel\n",
|
||||
"\n",
|
||||
"Once you've installed the additional packages, you need to restart the notebook kernel so it can find the packages."
|
||||
"### Colab only: Uncomment the following cell to restart the kernel"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"metadata": {
|
||||
"id": "restart"
|
||||
"id": "D-ZBOjErv5mM"
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"import os\n",
|
||||
"# Automatically restart kernel after installs so that your environment can access the new packages\n",
|
||||
"# import IPython\n",
|
||||
"\n",
|
||||
"if not os.getenv(\"IS_TESTING\"):\n",
|
||||
" # Automatically restart kernel after installs\n",
|
||||
" import IPython\n",
|
||||
"\n",
|
||||
" app = IPython.Application.instance()\n",
|
||||
" app.kernel.do_shutdown(True)"
|
||||
"# app = IPython.Application.instance()\n",
|
||||
"# app.kernel.do_shutdown(True)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {
|
||||
"id": "before_you_begin:nogpu"
|
||||
"id": "yfEglUHQk9S3"
|
||||
},
|
||||
"source": [
|
||||
"## Before you begin\n",
|
||||
"\n",
|
||||
"### GPU runtime\n",
|
||||
"### Set your project ID\n",
|
||||
"\n",
|
||||
"This tutorial does not require a GPU runtime.\n",
|
||||
"\n",
|
||||
"### Set up your Google Cloud project\n",
|
||||
"\n",
|
||||
"**The following steps are required, regardless of your notebook environment.**\n",
|
||||
"\n",
|
||||
"1. [Select or create a Google Cloud project](https://console.cloud.google.com/cloud-resource-manager). When you first create an account, you get a $300 free credit towards your compute/storage costs.\n",
|
||||
"\n",
|
||||
"2. [Make sure that billing is enabled for your project.](https://cloud.google.com/billing/docs/how-to/modify-project)\n",
|
||||
"\n",
|
||||
"3. [Enable the following APIs: Vertex AI APIs, Compute Engine APIs, and Cloud Storage.](https://console.cloud.google.com/flows/enableapi?apiid=ml.googleapis.com,compute_component,storage-component.googleapis.com)\n",
|
||||
"\n",
|
||||
"4. If you are running this notebook locally, you will need to install the [Cloud SDK]((https://cloud.google.com/sdk)).\n",
|
||||
"\n",
|
||||
"5. Enter your project ID in the cell below. Then run the cell to make sure the\n",
|
||||
"Cloud SDK uses the right project for all the commands in this notebook.\n",
|
||||
"\n",
|
||||
"**Note**: Jupyter runs lines prefixed with `!` as shell commands, and it interpolates Python variables prefixed with `$`."
|
||||
"**If you don't know your project ID**, try the following:\n",
|
||||
"* Run `gcloud config list`.\n",
|
||||
"* Run `gcloud projects list`.\n",
|
||||
"* See the support page: [Locate the project ID](https://support.google.com/googleapi/answer/7014113)"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -273,33 +196,10 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"PROJECT_ID = \"[your-project-id]\" # @param {type:\"string\"}"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"metadata": {
|
||||
"id": "autoset_project_id"
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"if PROJECT_ID == \"\" or PROJECT_ID is None or PROJECT_ID == \"[your-project-id]\":\n",
|
||||
" # Get your GCP project id from gcloud\n",
|
||||
" shell_output = ! gcloud config list --format 'value(core.project)' 2>/dev/null\n",
|
||||
" PROJECT_ID = shell_output[0]\n",
|
||||
" print(\"Project ID:\", PROJECT_ID)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"metadata": {
|
||||
"id": "set_gcloud_project_id"
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"! gcloud config set project $PROJECT_ID"
|
||||
"PROJECT_ID = \"[your-project-id]\" # @param {type:\"string\"}\n",
|
||||
"\n",
|
||||
"# Set the project id\n",
|
||||
"! gcloud config set project {PROJECT_ID}"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -310,16 +210,7 @@
|
||||
"source": [
|
||||
"#### Region\n",
|
||||
"\n",
|
||||
"You can also change the `REGION` variable, which is used for operations\n",
|
||||
"throughout the rest of this notebook. Below are regions supported for Vertex AI. We recommend that you choose the region closest to you.\n",
|
||||
"\n",
|
||||
"- Americas: `us-central1`\n",
|
||||
"- Europe: `europe-west4`\n",
|
||||
"- Asia Pacific: `asia-east1`\n",
|
||||
"\n",
|
||||
"You may not use a multi-regional bucket for training with Vertex AI. Not all regions provide support for all Vertex AI services.\n",
|
||||
"\n",
|
||||
"Learn more about [Vertex AI regions](https://cloud.google.com/vertex-ai/docs/general/locations)"
|
||||
"You can also change the `REGION` variable used by Vertex AI. Learn more about [Vertex AI regions](https://cloud.google.com/vertex-ai/docs/general/locations)."
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -330,33 +221,7 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"REGION = \"[your-region]\" # @param {type: \"string\"}\n",
|
||||
"if REGION == \"[your-region]\":\n",
|
||||
" REGION = \"us-central1\""
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {
|
||||
"id": "timestamp"
|
||||
},
|
||||
"source": [
|
||||
"#### Timestamp\n",
|
||||
"\n",
|
||||
"If you are in a live tutorial session, you might be using a shared test account or project. To avoid name collisions between users on resources created, you create a timestamp for each instance session, and append the timestamp onto the name of resources you create in this tutorial."
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"metadata": {
|
||||
"id": "timestamp"
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"from datetime import datetime\n",
|
||||
"\n",
|
||||
"TIMESTAMP = datetime.now().strftime(\"%Y%m%d%H%M%S\")"
|
||||
"REGION = \"us-central1\" # @param {type: \"string\"}"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -367,53 +232,54 @@
|
||||
"source": [
|
||||
"### Authenticate your Google Cloud account\n",
|
||||
"\n",
|
||||
"**If you are using Google Cloud Notebooks**, your environment is already authenticated. Skip this step.\n",
|
||||
"Depending on your Jupyter environment, you may have to manually authenticate. Follow the relevant instructions below.\n",
|
||||
"\n",
|
||||
"**If you are using Colab**, run the cell below and follow the instructions when prompted to authenticate your account via oAuth.\n",
|
||||
"**1. Vertex AI Workbench**\n",
|
||||
"* Do nothing as you are already authenticated.\n",
|
||||
"\n",
|
||||
"**Otherwise**, follow these steps:\n",
|
||||
"\n",
|
||||
"In the Cloud Console, go to the [Create service account key](https://console.cloud.google.com/apis/credentials/serviceaccountkey) page.\n",
|
||||
"\n",
|
||||
"**Click Create service account**.\n",
|
||||
"\n",
|
||||
"In the **Service account name** field, enter a name, and click **Create**.\n",
|
||||
"\n",
|
||||
"In the **Grant this service account access to project** section, click the Role drop-down list. Type \"Vertex\" into the filter box, and select **Vertex Administrator**. Type \"Storage Object Admin\" into the filter box, and select **Storage Object Admin**.\n",
|
||||
"\n",
|
||||
"Click Create. A JSON file that contains your key downloads to your local environment.\n",
|
||||
"\n",
|
||||
"Enter the path to your service account key as the GOOGLE_APPLICATION_CREDENTIALS variable in the cell below and run the cell."
|
||||
"**2. Local JupyterLab instance, uncomment and run:**"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"metadata": {
|
||||
"id": "gcp_authenticate"
|
||||
"id": "ce6043da7b33"
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"# If you are running this notebook in Colab, run this cell and follow the\n",
|
||||
"# instructions to authenticate your GCP account. This provides access to your\n",
|
||||
"# Cloud Storage bucket and lets you submit training jobs and prediction\n",
|
||||
"# requests.\n",
|
||||
"\n",
|
||||
"import os\n",
|
||||
"import sys\n",
|
||||
"\n",
|
||||
"# If on Google Cloud Notebook, then don't execute this code\n",
|
||||
"if not os.path.exists(\"/opt/deeplearning/metadata/env_version\"):\n",
|
||||
" if \"google.colab\" in sys.modules:\n",
|
||||
" from google.colab import auth as google_auth\n",
|
||||
"\n",
|
||||
" google_auth.authenticate_user()\n",
|
||||
"\n",
|
||||
" # If you are running this notebook locally, replace the string below with the\n",
|
||||
" # path to your service account key and run this cell to authenticate your GCP\n",
|
||||
" # account.\n",
|
||||
" elif not os.getenv(\"IS_TESTING\"):\n",
|
||||
" %env GOOGLE_APPLICATION_CREDENTIALS ''"
|
||||
"# ! gcloud auth login"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {
|
||||
"id": "0367eac06a10"
|
||||
},
|
||||
"source": [
|
||||
"**3. Colab, uncomment and run:**"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"metadata": {
|
||||
"id": "21ad4dbb4a61"
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"# from google.colab import auth\n",
|
||||
"# auth.authenticate_user()"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {
|
||||
"id": "c13224697bfb"
|
||||
},
|
||||
"source": [
|
||||
"**4. Service account or other**\n",
|
||||
"* See how to grant Cloud Storage permissions to your service account at https://cloud.google.com/storage/docs/gsutil/commands/iam#ch-examples."
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -424,11 +290,7 @@
|
||||
"source": [
|
||||
"### Create a Cloud Storage bucket\n",
|
||||
"\n",
|
||||
"**The following steps are required, regardless of your notebook environment.**\n",
|
||||
"\n",
|
||||
"When you initialize the Vertex SDK for Python, you specify a Cloud Storage staging bucket. The staging bucket is where all the data associated with your dataset and model resources are retained across sessions.\n",
|
||||
"\n",
|
||||
"Set the name of your Cloud Storage bucket below. Bucket names must be globally unique across all Google Cloud projects, including those outside of your organization."
|
||||
"Create a storage bucket to store intermediate artifacts such as datasets."
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -439,19 +301,7 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"BUCKET_NAME = \"gs://[your-bucket-name]\" # @param {type:\"string\"}"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"metadata": {
|
||||
"id": "autoset_bucket"
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"if BUCKET_NAME == \"\" or BUCKET_NAME is None or BUCKET_NAME == \"gs://[your-bucket-name]\":\n",
|
||||
" BUCKET_NAME = \"gs://\" + PROJECT_ID + \"aip-\" + TIMESTAMP"
|
||||
"BUCKET_URI = f\"gs://your-bucket-name-{PROJECT_ID}-unique\" # @param {type:\"string\"}"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -471,27 +321,7 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"! gsutil mb -l $REGION -p $PROJECT_ID $BUCKET_NAME"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {
|
||||
"id": "validate_bucket"
|
||||
},
|
||||
"source": [
|
||||
"Finally, validate access to your Cloud Storage bucket by examining its contents:"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"metadata": {
|
||||
"id": "validate_bucket"
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"! gsutil ls -al $BUCKET_NAME"
|
||||
"! gsutil mb -l $REGION -p $PROJECT_ID $BUCKET_URI"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -538,7 +368,7 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"aiplatform.init(project=PROJECT_ID, staging_bucket=BUCKET_NAME)"
|
||||
"aiplatform.init(project=PROJECT_ID, staging_bucket=BUCKET_URI)"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -630,7 +460,7 @@
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"dataset = aiplatform.TextDataset.create(\n",
|
||||
" display_name=\"NCBI Biomedical\" + \"_\" + TIMESTAMP,\n",
|
||||
" display_name=\"NCBI Biomedical\",\n",
|
||||
" gcs_source=[IMPORT_FILE],\n",
|
||||
" import_schema_uri=aiplatform.schema.dataset.ioformat.text.extraction,\n",
|
||||
")\n",
|
||||
@@ -670,7 +500,7 @@
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"job = aiplatform.AutoMLTextTrainingJob(\n",
|
||||
" display_name=\"biomedical_\" + TIMESTAMP, prediction_type=\"extraction\"\n",
|
||||
" display_name=\"biomedical\", prediction_type=\"extraction\"\n",
|
||||
")\n",
|
||||
"\n",
|
||||
"print(job)"
|
||||
@@ -707,7 +537,7 @@
|
||||
"source": [
|
||||
"model = job.run(\n",
|
||||
" dataset=dataset,\n",
|
||||
" model_display_name=\"biomedical_\" + TIMESTAMP,\n",
|
||||
" model_display_name=\"biomedical\",\n",
|
||||
" training_fraction_split=0.8,\n",
|
||||
" validation_fraction_split=0.1,\n",
|
||||
" test_fraction_split=0.1,\n",
|
||||
@@ -735,7 +565,7 @@
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"# Get model resource ID\n",
|
||||
"models = aiplatform.Model.list(filter=\"display_name=biomedical_\" + TIMESTAMP)\n",
|
||||
"models = aiplatform.Model.list(filter=\"display_name=biomedical\")\n",
|
||||
"\n",
|
||||
"# Get a reference to the Model Service client\n",
|
||||
"client_options = {\"api_endpoint\": f\"{REGION}-aiplatform.googleapis.com\"}\n",
|
||||
@@ -916,7 +746,7 @@
|
||||
"job.delete()\n",
|
||||
"\n",
|
||||
"if os.getenv(\"IS_TESTING\"):\n",
|
||||
" ! gsutil -m rm -r $BUCKET_NAME"
|
||||
" ! gsutil -m rm -r $BUCKET_URI"
|
||||
]
|
||||
}
|
||||
],
|
||||
|
||||
Reference in New Issue
Block a user